Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0312900 |
| Transcript ID | LotjaGi6g1v0312900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-1,3-galactosyltransferase-like protein; TAIR: AT4G21060.2 Galactosyltransferase family protein; Swiss-Prot: sp|A7XDQ9|B3GTK_ARATH Hydroxyproline O-galactosyltransferase GALT2; TrEMBL-Plants: tr|I1MF03|I1MF03_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0312900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:63098968..63105024) extracted from Lotus japonicus Gifu genome v1.2.
AAGTAAAAGTAAAATAAGAAATCAAAAATCAAAACCACCCTTCGAAACTGCAAAACTGTAGCTATGTGTATTCTTTGTTC TATCCGTAGTATGATTTTTTGGTGAAGTCTTCCATGCCCTCCTTCCCTGTTGAAGGCGATAGTATATTGTTTGCTTCTAC GACCTGTGTTTGTGTTTGTGTTTGTGTTTGTGTTTGATCGAAGATCCACGTATTCCCTTCATCCTCCCACCAACCAACTG TCATGGGTTTTTGAGGTAATTGTTGTAGAGTAGTATATTGTACTATGTATTGTTTCTATTTTTGAAGATGAAGAGACTGA GAACTGAACCTTCCAGTTCGAGGAAATTAAGGTTGTCTCATGTTTTGTTTGGTGTTGGGGTCTTGTACTTGGTTTTTGTA TCATGTAACTTTCCTCAGTTTCTCAAAGTTGTATCAACGTTGAGTGGGGATGAGAGTGACTATAGGTTAGATGGGATAGC TATTGGGGGCTCTGACTCTGATGATGCAGATTTAAGCAAACCTTTTGTTGGTTCTGTTTATAAAGATGCATTTCATAGGA GGTTAGAGGATAATAGGGACCGCGACGCGCCCTTGAGGCCGAACAAGGATCCAATGAAGGAGGATGATCGTGGGAATGGG CGTGACCGTGAATCTAGGAAGCATCAGGGATATGGTAGGATTACTGGAGAGATCTTGCGGCAAAGGAATCGGGTCAGTGA TATGTCTGTGCTCGAGAGAATGGCGGATGAGGCGTGGACTTTGGGGTTAAAGGCTTGGGGAGAAATAGACAAGTTTGATA GTAATGAGTCTGAAGTGAGCTCTGTCGCGGAAGGAAAGCTTGATCCTTGCCCTTCCTGGATATCAATGAGTGGGGAAGAA TTGCGGAAGGGGGATGGCTTGGTGTTTATACCTTGTGGTCTTGCAGCCGGTTCTTCCATCACTGTGGTGGGCACACCCCT GCATGCTCATATGGAGCATTCTCACCTGTTGGCAAGGTTGAAAGGTACTGGAGTGGTTTCTGTTTCGCAGTTCATGGTTG AATTACAAGGACTGAAGTCAGCGGAAGGGGAAGATCCTCCAAAGATTCTTCACTTGAATCCTCGGTTAAGAGGGGATTGG AGCAAACAACCGGTTATTGAGCATAATACCTGTTATCGAATGCACTGGGGAACAGCTCAAAGATGTGATGGTCTACCATC TGAGGATGACGAAGGAATGCTTGGTATAATTCTATCACATTTCATTTTCAAGTATTGCTATTTTGTAAGAAAAATGTGTT GCAGAATAGAATGAATGTTGTCATAATGTAGAAGGAAAGGAAATAGAAAAAAAAAATGTTAAAAATCTTGGAAATGGTGG AATGCAGAGAAAAAAAGAAGAATACAAATGAGCTTGAATATAAGGAGTGCCTTACTGTTTCCTACATGGTCAACAAAAGA AATTCTTGTTTGTTGTGTATTGTGTGTGATAAGCCTATACATATAAACGCCACAGAGTCAATGCTTATTCTTGTCATAAA TTGTATGGCTAGGATATAGAATCACACCCTATTCAAGATTCTCAGCATAAGCAGATTTTAGATCTATCACTTTCTGTTTT CGTTGATATAAAGTCCAAGGATGTTACTTGTCACTGTATTATGTATGATCAATTTGTTGAGCTGAAAAATAGTATATGAC TAAAGAGTCAAGGATAATGAATCAATACAATTCCTCTTGTTTTACAATATGGATATTATCATCTTTTGCTGCTTATCGAT ATTAGCACAGAAACATGCAAAAAGTAATACTTGACTTTTTTTTTCTTTTCTTTTTTTTATAATATAGCGTTTATAGAATG ACATTTGGTTTAGAAGAATGATAACACAATCCTTTAATCTGTTTTTGTTTTTATTTTTATTTTTATAATATAGTGGGACA ATAATCTTTTATAGAATGGCATTTGGTTTAATCCTTTTAAGTTTTAATTTGATATATAAATAATTTTGTATGTGCTTTGG TCATGCTTTGCAGTTGATGGGCATAGACGATGTGAAAAATGGATGCGTGATGACATCGCAGACTCGAGAGAGTCCAAAAC AACATCATGGTTCAAGCGGTTTATTGGGCGTGAGCAGAAGCCAGAAGTGGCCTGGCCATTTCCTTTTATAGAGGGTAAAA TGTTTGTCCTTACACTGCGTGCTGGTGTTGATGGATACCATATTAATGTTGGGGGTCGCCATGTGACTTCATTTCCATAT CGGACAGTAAGTTGACTGAGATATGACATATGTTTTCATCTTATGCTTTCACTAAATATTTTGATGCAGTGAAATTGTGT ATTTAACGTTTTTATGACAATCATTTTTCGCGGTGATAAGTTTGCTTATACTGTTGCTTTTATTTAACCTCAGTGGACTT TGTTGAAATAAAATTGTGCTAATGGCAGAAAACTTGATCTCTTATTTATAGCTTGAAACCAAAGAAAACTAAAGACCAAC CCATTAGAAGAGGTTTAGATTTAAATGATCTATCATTAGACATAATTTGAATATGACATTATGGCAATGTTTGATCCATG TAGCCAACTCCACCTAATTGAAAGAACTTGGTTATCTTTGTTTATTCTTTAATCCATGCTGCTCTCATTGTGTCTTTTAC CGCTGATTTTTCTTTTTCACTTTATCATCAGGGGTTTACACTTGAAGATGCTACAGGATTGGCTGTTAAAGGAAATGTTG ATGTTCATTCAATTTTCGCTACCTGTCTCCCTACTTCACACCAAAGTTTCTCACCTCATAGAGTACTGGAAATGTCTGGG ACATGGAAAGCCAGTGCTCTACCCAAACATTCTGTTAGACTTTTTATTGGAGTTCTTTCTGCTTCAAATCACTTTGCTGA ACGTATGGCAGTTCGGAAAACATGGATGCAAGCAGACGCAATCAAGTCCTCTAATGTTGTAGCACGATTCTTTGTTGCAT TGGTAAGGCTGCTGCCTATATTTTTGTCAGTTATAGAAGCATCTAGTGACTCAAGAAGAGAAACACAATCTTTATTTTAA TCCACCATGAAGAAATACATGATACCAAGAATGCCATAAAACTGCTGTAAGAACTTCATGGAAAAGAAAAACAAAACCTC AACAAGTTTTTTGTGTGTGAAAGTATTGTGGTAGAATTGTGGGTTTAAATCCTGAAGGGGCAATGTCAATATTTTGTTCT TGCTTGAATGGTGGCTTTTCTGACTTTTAATTTGATGGCCAAGAAGCTATGACAGTCTACCAACAGAATAAGGAAATTTT AGGTATTCTTACTAGTGGTTTCTTAAGGTTTCAAGAGCTAGGATTTGTTTAATTAATTGAATAATTCTGAGATATTTGAC TAGAAAAATCAATGAGACAGAAGAGAACTTCAGCTTTTGATATATTTTGTAAATACCTAAGAATGTCAATGATGATTTAT TGATTCTCTACTTCGCTTGCTATAATTGATTGCCAAAGTTTGTTTGTAAATACCTTAGAAAGAGAAGATGAAATGTGTTG TGAGATCAGTTTACCTTCGGCATTTCATGCATTTAGTTTTGTGGAACAGTTATCAATGGCAATGGAGCCTACTGTTTTGT GTGTGTTACTTCTAAGCAAACCATGTCAGTGCTAAAAAACTTATAGGACTAGCTATCAAGTATCACCTTAGCTATTTTGT GTTCCACGGAGCTCTTCTCTTAAATAAATTCTCAACAAATTTGATTCTTCCAAAATTCATTGTCTCATGCAGGATGTGGC TGATATAAAAGATTTGGGTTTGAATGAGATAGGTGTTCTCATGGAGTTGATGTTAACAATTATTTTGCCTTTGGAATGAG TGATATTATAACACAATTGTTTGTAGATACATAGGAGTTCTATGAGATGATTTATGTTGAAATGTCTGTTAATTATAATG CCATTTGTGAAGAGAAAATCGTTGTCTCAATTCATACACAACCAGATATGTGATTATTACAAATTATAGGGCTTTGTGAG CATTTTCATTTTTTCTGTCTATCATTATTCTTATTCATATGTTATGGCTGATTTTCAATGTTCTGTGCCTATTTTTAATA TCAACATGAAGAATCCAAGAAACGAAGTAAATGCAGAGCTGAGGAAGGAGGCTGCTTTCTTTGGTGATATTGTCATTTTG CCCTTTATGGATCGCTATGAGCTTGTTGTGCTTAAAACCATGGCTATCTGTGAGTTTGGGGTAAGTTCATCCATTTAACT TTCAGCCAGTTTTTTTATTTTGGGGATAGGTGACTTGCACATCTGTTACCTCCCTTAAAATGTGCAACTCTTGTGGCTCC TGGTTTTTACCTTTTTGTCATCTCCAGCTAAGTAAGCCAACTTTCTTTTACACAGATTCAGAATGTGACTGCTGAATATA TCATGAAATGTGACGATGACACTTTTATAAGGGTGGATACTGTCTTAAAAGAAATTGAAGCTGTGCCCAAGGAAAAGTCC CTTTATATGGGCAATCTCAATCTCTTGCATCGCCCCCTGAGAAATGGAAAATGGGCCGTTACTTATGAGGTATGATAGTT GCCTCATATCATTTTGGGTCTTTTTGTTACTGAGTGTGATAATTTTCCTGCATTTCAGGGTGCTTGTATATAGGAATTAG GTTATTAGTTATATGTGTGTCCCAAGTTCCCAACAAACCTCACTCAGTGTGAAAAGGCTTTTGTTGTGTATCCCACAAGA TCCTCATATGCAGGTGAAACTTGTTTTTGCCCAAAATAGTGTTTTAAACTAGGCAGGATAAAACTAAAGAGCTTCTATAT AGGGACTTGGATCCTCTAAAGTGAACTTAGAGGGTAAAGTAATTCATCATAACCATTGACTGAGAAATCAATAGTTGATA TTGTGATCATATACTTGCACATGTATAACAAACTATGATCTTATTTTAATCTCAACCATTAACTTTTCAATCAATGGTTG TGATTGACTGATTGTGTATTTGACGTAGTTCTATTTTCCTTGGTTGTCCTTGTCTTATTAGTTGGTGACTAGTACTGGAG AACACAGAATATTGTTATTTGTTCTTGTCCCTCTTTGTTAAGTAAAATGTTACTTGGTGCAGGAGTGGCCAGAAGAAGCG TATCCTCCTTACGCCAATGGTCCCGCGTACATCATTTCCAAAGACATTGTTACATTCATCATATCTCAACAAAAAGATAG GAAGCTGAGGGTTCGTTATTCTATAGTTAGTTCCAGTTCCAGTTTTGTGTTATCGGTGCATATTAATGATTGATGAAACA TTTGTTTCTGGTGGCAGCTGTTTAAAATGGAGGATGTAAGCATGGGAATGTGGGTTGAGAGATTCAACAACACCGTGAGT GCTGTTAAGTACTCCCACAATTGGAAGTTTTGTCAGTATGGATGCATGGAGGGGTACTTCACATCGCATTACCAATCACC AAGGCAGATGGTGTGTCTGTGGGACAAATTGTCAAGAGGTCATGCGCGGTGCTGCAACTTCAGATAACAATCTGCAACTC CACCACTTGAGTTACCATTGTATCATTGTTGTCTTAAAATTTTTATGCTGATCTTTGTTCACCTAGTTTAGTGCTTGGAA AAAAACTACAGTGTAAAGAAAATGTAGTACATATTCAATCTGAAAGAAGTAGAATTTAGCAGGGTGTTCATATGGTCTTG TTTCGTTTGAGAATGAGCTTCAAATTGAATTATACATGAACTTTGCTTGTCAAACCAAACCATATTTGACGGTTAGTGAA GTTTATAAATCAAATGAAACAGTTTAGCCTCTAAGGACTGAACTAAACTGAACAGTAGTTTACTGCTTGATTTGGCTTCG GATTAAGATTTATGTGCTTCCAAATTTATTTGTATAGAATCAATATTGAACTTATTATATTCGAAATATTTGTCTAATTG AAGTAAAGGAAAAGCAAGTCATGGTTACTTTTAGCATGTTTGGATGAGTTTCTTCTTACTCAAAATCAATTATGACACTT AGAAGCTACTTGTAGGAGCTTCTCTCACGAAATGGTTTTACTTTAGAATCAATTGAC
CDS sequence (LotjaGi6g1v0312900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAGACTGAGAACTGAACCTTCCAGTTCGAGGAAATTAAGGTTGTCTCATGTTTTGTTTGGTGTTGGGGTCTTGTA CTTGGTTTTTGTATCATGTAACTTTCCTCAGTTTCTCAAAGTTGTATCAACGTTGAGTGGGGATGAGAGTGACTATAGGT TAGATGGGATAGCTATTGGGGGCTCTGACTCTGATGATGCAGATTTAAGCAAACCTTTTGTTGGTTCTGTTTATAAAGAT GCATTTCATAGGAGGTTAGAGGATAATAGGGACCGCGACGCGCCCTTGAGGCCGAACAAGGATCCAATGAAGGAGGATGA TCGTGGGAATGGGCGTGACCGTGAATCTAGGAAGCATCAGGGATATGGTAGGATTACTGGAGAGATCTTGCGGCAAAGGA ATCGGGTCAGTGATATGTCTGTGCTCGAGAGAATGGCGGATGAGGCGTGGACTTTGGGGTTAAAGGCTTGGGGAGAAATA GACAAGTTTGATAGTAATGAGTCTGAAGTGAGCTCTGTCGCGGAAGGAAAGCTTGATCCTTGCCCTTCCTGGATATCAAT GAGTGGGGAAGAATTGCGGAAGGGGGATGGCTTGGTGTTTATACCTTGTGGTCTTGCAGCCGGTTCTTCCATCACTGTGG TGGGCACACCCCTGCATGCTCATATGGAGCATTCTCACCTGTTGGCAAGGTTGAAAGGTACTGGAGTGGTTTCTGTTTCG CAGTTCATGGTTGAATTACAAGGACTGAAGTCAGCGGAAGGGGAAGATCCTCCAAAGATTCTTCACTTGAATCCTCGGTT AAGAGGGGATTGGAGCAAACAACCGGTTATTGAGCATAATACCTGTTATCGAATGCACTGGGGAACAGCTCAAAGATGTG ATGGTCTACCATCTGAGGATGACGAAGGAATGCTTGTTGATGGGCATAGACGATGTGAAAAATGGATGCGTGATGACATC GCAGACTCGAGAGAGTCCAAAACAACATCATGGTTCAAGCGGTTTATTGGGCGTGAGCAGAAGCCAGAAGTGGCCTGGCC ATTTCCTTTTATAGAGGGTAAAATGTTTGTCCTTACACTGCGTGCTGGTGTTGATGGATACCATATTAATGTTGGGGGTC GCCATGTGACTTCATTTCCATATCGGACAGGGTTTACACTTGAAGATGCTACAGGATTGGCTGTTAAAGGAAATGTTGAT GTTCATTCAATTTTCGCTACCTGTCTCCCTACTTCACACCAAAGTTTCTCACCTCATAGAGTACTGGAAATGTCTGGGAC ATGGAAAGCCAGTGCTCTACCCAAACATTCTGTTAGACTTTTTATTGGAGTTCTTTCTGCTTCAAATCACTTTGCTGAAC GTATGGCAGTTCGGAAAACATGGATGCAAGCAGACGCAATCAAGTCCTCTAATGTTGTAGCACGATTCTTTGTTGCATTG AATCCAAGAAACGAAGTAAATGCAGAGCTGAGGAAGGAGGCTGCTTTCTTTGGTGATATTGTCATTTTGCCCTTTATGGA TCGCTATGAGCTTGTTGTGCTTAAAACCATGGCTATCTGTGAGTTTGGGATTCAGAATGTGACTGCTGAATATATCATGA AATGTGACGATGACACTTTTATAAGGGTGGATACTGTCTTAAAAGAAATTGAAGCTGTGCCCAAGGAAAAGTCCCTTTAT ATGGGCAATCTCAATCTCTTGCATCGCCCCCTGAGAAATGGAAAATGGGCCGTTACTTATGAGGAGTGGCCAGAAGAAGC GTATCCTCCTTACGCCAATGGTCCCGCGTACATCATTTCCAAAGACATTGTTACATTCATCATATCTCAACAAAAAGATA GGAAGCTGAGGCTGTTTAAAATGGAGGATGTAAGCATGGGAATGTGGGTTGAGAGATTCAACAACACCGTGAGTGCTGTT AAGTACTCCCACAATTGGAAGTTTTGTCAGTATGGATGCATGGAGGGGTACTTCACATCGCATTACCAATCACCAAGGCA GATGGTGTGTCTGTGGGACAAATTGTCAAGAGGTCATGCGCGGTGCTGCAACTTCAGATAA
Protein sequence (LotjaGi6g1v0312900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKRLRTEPSSSRKLRLSHVLFGVGVLYLVFVSCNFPQFLKVVSTLSGDESDYRLDGIAIGGSDSDDADLSKPFVGSVYKD AFHRRLEDNRDRDAPLRPNKDPMKEDDRGNGRDRESRKHQGYGRITGEILRQRNRVSDMSVLERMADEAWTLGLKAWGEI DKFDSNESEVSSVAEGKLDPCPSWISMSGEELRKGDGLVFIPCGLAAGSSITVVGTPLHAHMEHSHLLARLKGTGVVSVS QFMVELQGLKSAEGEDPPKILHLNPRLRGDWSKQPVIEHNTCYRMHWGTAQRCDGLPSEDDEGMLVDGHRRCEKWMRDDI ADSRESKTTSWFKRFIGREQKPEVAWPFPFIEGKMFVLTLRAGVDGYHINVGGRHVTSFPYRTGFTLEDATGLAVKGNVD VHSIFATCLPTSHQSFSPHRVLEMSGTWKASALPKHSVRLFIGVLSASNHFAERMAVRKTWMQADAIKSSNVVARFFVAL NPRNEVNAELRKEAAFFGDIVILPFMDRYELVVLKTMAICEFGIQNVTAEYIMKCDDDTFIRVDTVLKEIEAVPKEKSLY MGNLNLLHRPLRNGKWAVTYEEWPEEAYPPYANGPAYIISKDIVTFIISQQKDRKLRLFKMEDVSMGMWVERFNNTVSAV KYSHNWKFCQYGCMEGYFTSHYQSPRQMVCLWDKLSRGHARCCNFR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 33 | 33 | 7.0 | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| TMHMM | 16 | 38 | 23 | - | – | |
| Phobius | 20 | 39 | 20 | - | – | |
| Phobius | 40 | 686 | 647 | - | – | |
| PANTHER | 87 | 682 | 596 | 2.5E-258 | – | |
| PANTHER | 87 | 682 | 596 | 2.5E-258 | ||
| MobiDBLite | 88 | 122 | 35 | - | – | |
| ProSiteProfiles | 197 | 407 | 211 | 31.943 | ||
| Gene3D | 198 | 307 | 110 | 3.0E-11 | – | |
| CDD | 199 | 405 | 207 | 9.28732E-23 | ||
| SUPERFAMILY | 199 | 407 | 209 | 9.5E-25 | ||
| Pfam | 200 | 405 | 206 | 1.2E-47 | ||
| SMART | 201 | 406 | 206 | 3.0E-29 | ||
| Gene3D | 322 | 405 | 84 | 2.6E-10 | – | |
| Pfam | 453 | 633 | 181 | 4.9E-33 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi6g1v0312900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…