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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0321300 |
| Transcript ID | LotjaGi6g1v0321300.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT4G18710.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q39011|KSG7_ARATH Shaggy-related protein kinase eta; TrEMBL-Plants: tr|I3T330|I3T330_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0321300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:63769491..63772395) extracted from Lotus japonicus Gifu genome v1.2.
GATTCACAAGGATTTGTTTTGAACTTATGATCTTTTGCTTGTTATTTTGTACTTAGCACCTTGTCTTTAATTTTTTTAGC AGCTGAGTTCCGTCACCAGATTTATGCAATCATCATTATATTGCTTATACCTTGTCTATAATATTCATTATACTTTGTCA TAAGTAATAAATATTGCAATTCTTAACAGGAGATGTCTACTTCTGTTATCAATGGGAATGATTCCCTAACTGGTCACATC ATATCTACAACAATTGGAGGCAAAAATGGGGAGCCCAAACAGGTATGTTTTGAATTATTTGCCTAGTTGTTCAAAATTCT ATTTGATATTTATCCTGGGTAGCAAGTTTGATTTCTTGTACAATGATTCTTGTAGACTATTAGTTACATGGCAGAACGGG TTGTGGGAACTGGATCATTTGGAATTGTTTTCCAGGTATGCTAATACTAGATTCATAGTTGTTGCTGTCTCCGCCAATTT TGCGACATGCTGATTGTTTATCCTCTCAGGCAAAATGCTTGGAATCTGGAGAGGCGGTCGCCATTAAGAAGGTTTTACAA GACCGAAGATATAAGAATCGTGAACTGCAGCTGATGCGTGTGATGGATCATCCAAATGTTGTCTCTCTGAAGCATTGTTT CTTTTCCACTACAAGTACAGATGAACTTTTTCTGAATTTAGTGATGGAATATGTTCCAGAATCCATGTATAGGGTCATCA AGCACTACAGTAATGCTAATCAAAGAATGCCTATCATCTATGTGAAGCTTTATATGTACCAGGTATGCCTCACTTTCTGG TGATTCAAAAACTTCTGATTTATCTTCTCACTCCCTGATAATATTTCTTGGTGGGCATACAGATTTTCAGGGGATTGGCG TATATCCACACTGTTCCTGGAGTTTGCCACAGAGATTTGAAGCCTCAAAATATATTGGTTCGTTTATATATTCTTGCTGA AAGCAGTACTTATACATTATAAGTCAAAATTCTTGTTAAAAGTAGTACTTATTTCTGGATCTGATTTCATTCTGTGCATT CTCCAGGTTGATCCTCTTACACACCAAGTTAAGCTATGTGATTTTGGAAGTGCAAAAATGCTAGTACGTTGACCTCCTCA TTTTACTTTAACATGCTTAGTTTTTTCCTGTTTTGTGCTTAACAATGTTTTTAATATTAGCTACATAGTAACTTATCTAG AATGTCAACCAATAATCTACCAATTTCCTCAACGTTTGACAGTGTGGACGAAGAGGGTACAGTTATTATGCTGTGTTTGA TAGTAGTTTCATATGCTAGTATCTTGCTCTGCTCAGCTGCAAGCTGTGGATCTGTCTTTTTATTTTTTCTTTTCTTGTGT GTGTATTTTTGCTAAATTGAGTATTTTGAGATGGTTTTGACCTTTTTGTGGAAACCAGTGTATATTGGTTCTTTCTGAGG GTTGTCATGTTCCGCATGCATCTAAATGACTAACTTGTAGCAAAGACTCTTACAGTTTCCATGATCATGGTTCCCCTAAT AAATTGATTTCTCTTTTTCCCCAATGGAATGTTTCTTGTAGTAACCTTGGATTTTGTCTGTTCAGGTTAAGGGTGAAGCT AACATATCATACATATGTTCACGTTTCTATCGAGCTCCAGAACTTATATTTGGTGCCACCGAGTATTCTACTTCAATTGA TATTTGGTCTGCTGGCTGTGTCCTTGCTGAGCTGCTTTTGGGCCAGGTTTGTGTCATTGTTTTAGTTTCATCATCATGAT CATTTACTGCAAAATGATGCAAGTATTCTTTCAATTATTTGCCACAAACATGTCGTCTGACATAATTTAAGCATTTGAAC TTTGCAGCCATTATTCCCTGGAGAAAATGCAGTGGACCAGCTCGTGCATATTATAAAGGTGTGATTGGTGTCAGCATTTA TCAAATGTTTCTAGATCATGCTTGTAACAAAGTCAGTCATCTATAAATTTGTGTATTTCAGGTCCTTGGAACACCCACTC GGGAGGAAGTACGCTGTATGAATCCTAATTACAATGACTTCAGGTTTCCACAAATTAAAGCACACCCATGGCACAAGGTC TGCAATTTTTATCTCATTTACTGTAGGTTTTTTCAGATGATGAAGATTTTGTAGACTTTCTAACACTTCAAAATTGTATA GATCTTTCACAAAAAGATGCCTCCAGAAGCTATTGATCTTGCTTCCCGGCTTTTGCAATACTCTCCAAGTCTTCGGTGTA CTGCGGTGAGTGTGGTTAGCTGGTCTCTCTTTTTCTATCTAAAAACCAGCATAGCAATGTAATAATAACTTTTTTTTTGT TATGCAGCTTGAAGCATGTGCACATCCTTTCTTTGATGAACTCCGAGAACCCAATGCTCGTCTGCCAAATGGTCGTCCAC TTCCCCCTCTATTCAACTTCAAACAAGAAGTAAGTACTTAAAACATCTTTGGTGGATAAACTTGGGCTCTAGCGGTAATC TATGTGTGACAAAATTGATACTAAGTACTCACTATTTGGCAAAAGATTGACAAAATTAGAAGTTTGAAAACATTCCATAT ATACTCATTCCATTTTCTAAGCTTTAGATTTGTCTGGTAGTCTGAATTTCCACTAGCAAGTGATTCTTTCTTTTGACCCG TGTATTCACAAGATACACTCTGGTTTTGTATGTATTTTTTCTTTTGTGTGTCTATTTCATTGAGTCGTATGCTCACAAAG CAATGCACTATGTTATCATTTCCTGATCCGATTAACATCCTAGTTAAACAAAAATGATGGGCAACTATATTGTGACTTTA CCTTGACAGATATCCGGAGCATCTCCAGAGCTTGTTAACAAATTGATACCTGACCATGTGAAGCGGCAAATAGGACTACA ATTTGTTCATGTGCCAGCATCTTAA
CDS sequence (LotjaGi6g1v0321300.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTACTTCTGTTATCAATGGGAATGATTCCCTAACTGGTCACATCATATCTACAACAATTGGAGGCAAAAATGGGGA GCCCAAACAGACTATTAGTTACATGGCAGAACGGGTTGTGGGAACTGGATCATTTGGAATTGTTTTCCAGGCAAAATGCT TGGAATCTGGAGAGGCGGTCGCCATTAAGAAGGTTTTACAAGACCGAAGATATAAGAATCGTGAACTGCAGCTGATGCGT GTGATGGATCATCCAAATGTTGTCTCTCTGAAGCATTGTTTCTTTTCCACTACAAGTACAGATGAACTTTTTCTGAATTT AGTGATGGAATATGTTCCAGAATCCATGTATAGGGTCATCAAGCACTACAGTAATGCTAATCAAAGAATGCCTATCATCT ATGTGAAGCTTTATATGTACCAGATTTTCAGGGGATTGGCGTATATCCACACTGTTCCTGGAGTTTGCCACAGAGATTTG AAGCCTCAAAATATATTGGTTGATCCTCTTACACACCAAGTTAAGCTATGTGATTTTGGAAGTGCAAAAATGCTAGTTAA GGGTGAAGCTAACATATCATACATATGTTCACGTTTCTATCGAGCTCCAGAACTTATATTTGGTGCCACCGAGTATTCTA CTTCAATTGATATTTGGTCTGCTGGCTGTGTCCTTGCTGAGCTGCTTTTGGGCCAGCCATTATTCCCTGGAGAAAATGCA GTGGACCAGCTCGTGCATATTATAAAGGTCCTTGGAACACCCACTCGGGAGGAAGTACGCTGTATGAATCCTAATTACAA TGACTTCAGGTTTCCACAAATTAAAGCACACCCATGGCACAAGATCTTTCACAAAAAGATGCCTCCAGAAGCTATTGATC TTGCTTCCCGGCTTTTGCAATACTCTCCAAGTCTTCGGTGTACTGCGCTTGAAGCATGTGCACATCCTTTCTTTGATGAA CTCCGAGAACCCAATGCTCGTCTGCCAAATGGTCGTCCACTTCCCCCTCTATTCAACTTCAAACAAGAAATATCCGGAGC ATCTCCAGAGCTTGTTAACAAATTGATACCTGACCATGTGAAGCGGCAAATAGGACTACAATTTGTTCATGTGCCAGCAT CTTAA
Protein sequence (LotjaGi6g1v0321300.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSTSVINGNDSLTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLESGEAVAIKKVLQDRRYKNRELQLMR VMDHPNVVSLKHCFFSTTSTDELFLNLVMEYVPESMYRVIKHYSNANQRMPIIYVKLYMYQIFRGLAYIHTVPGVCHRDL KPQNILVDPLTHQVKLCDFGSAKMLVKGEANISYICSRFYRAPELIFGATEYSTSIDIWSAGCVLAELLLGQPLFPGENA VDQLVHIIKVLGTPTREEVRCMNPNYNDFRFPQIKAHPWHKIFHKKMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE LREPNARLPNGRPLPPLFNFKQEISGASPELVNKLIPDHVKRQIGLQFVHVPAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 371 | 371 | 7.0E-254 | – | |
| PANTHER | 1 | 371 | 371 | 7.0E-254 | – | |
| Gene3D | 19 | 113 | 95 | 5.7E-33 | – | |
| CDD | 29 | 321 | 293 | 0.0 | ||
| SUPERFAMILY | 33 | 342 | 310 | 1.46E-89 | ||
| SMART | 34 | 318 | 285 | 5.3E-88 | ||
| Pfam | 34 | 318 | 285 | 3.8E-64 | ||
| ProSiteProfiles | 34 | 318 | 285 | 44.499 | ||
| ProSitePatterns | 40 | 64 | 25 | - | ||
| Gene3D | 114 | 361 | 248 | 2.2E-80 | – | |
| ProSitePatterns | 155 | 167 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0321300.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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