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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0328400 |
| Transcript ID | LotjaGi6g1v0328400.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ; TAIR: AT4G28480.2 DNAJ heat shock family protein; Swiss-Prot: sp|Q80Y75|DJB13_MOUSE DnaJ homolog subfamily B member 13; TrEMBL-Plants: tr|A0A067JNB8|A0A067JNB8_JATCU Uncharacterized protein; Found in the gene: LotjaGi6g1v0328400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:64345257..64347262) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGAGTGGATTACTACAAGATTTTGCAGGTTGGCAAGAACGCCACCGATGATGAGTTGAAGAAAGCTTACAGAAAGCT TGCCATGAAATGGCACCCTGATAAGAACCCCACCAATAAGAAAGACGCTGAGACTAAATTCAAACAGATTTCTGAAGCCT ACGAGGTACCACCTACTATCCTTAAATCTATTGTTTTCCTCTGTTTAGAAATTCACAGATACATGTAATATTGTAATGTA ACATTTCTAGGTGATTAATATATATAGATTCTGATTTGGTGTATGTGTTGGTTTGGTGAAGGTTCTAAGTGATCCTCAGA AGAAAGCAATTTATGATCAGTATGGAGAAGAAGGGCTTAAAGGGCAAGTGCCACCTCCAGATGCTGCTGGTGCTGGTGGG ACCTCATTCTTCCAAACTGGAGATGGACCAACAACGTTCAGGTTCAATCCCAGAAATGCAGATGACATCTTTGCCGAGTT TTTCGGGTTTTCAAGCCCGTTTGGAGGCATGGGTGGTGGTGGTGGAATGAGGGGTGGGTCTAGGTCCTTTGGTGGAATGT TTGGTGATGACATGTTCAGTTCATTTGGAGAAGGAAGGCCTATGAGTGCACAGGGTCCTCGCAAGGCACCTGCAATAGAA AATAGAGTGCCTTGTAGCCTTGAGGAGCTATATAAGGGGACTACCAAAAAGATGAAGATCTCAAGGGAGATTGCTGATGC AAGCGGGTAAGCACCACTCTGCTTTTCCATCTACTACAATGAAGCAAAGTATGAAAATATATAACTGATTACTCTGATAT AATTATGTGTTCAGTCTTGAGTTTAATTTAGGTGTTTTTCCTAGGCTGATTGAGTTCTGTGTTCAGAAGCCCCAAATCGT AGCTAGTTTTGTTTAATTTAGATATAATTTTGTTTTTTGAAGTCTATTAGTATTAGATTTGTGACCACTCAAATGGATTG CTAGTAGATTTCCGGTCCTGCAAAACTTCACGCTTCCTGCTTTGGAGTGAGGAGTGTGTTAGGAAGGTTCACATTAAATA AGAGACATGACCAACCAATAAGTTTAGAGCAATTATCACCGCAAAGCTAACTTTTACTGTAGTTCTAATAGCATATTAGA ATCTATCGTGGATCCGCCTAGGATAGTGTTAGACCTACCCTGAATTTCTACTATGCTAGAAATCTTTTCATGTAATGGAG CAAAAACTTGTTCTTCCTTTAGTTAGCTATTGAGATTTTGGGTAGAGCTGGACTTAACCTGAATTCAAATATGGTATATT AGCCTATCCTAGATACTTTTAGCCACCATCAGATGTCAAGACGATATGGCCTAGTAAGCGTATAGCAACCATCATCTCAA AGGTTGCTTTTGGGATATAGTGAATTTCAATATATTATCAGCTTCTTTCCTAAATTCACCTAGGTGTAGAGTTAGGCCTG AAGTGAATTTCTAGTAGTCATGAAAATTTTCTCATGTAATGAAGCAAAAGCTTGTTCTTCCAATCATTACTTTATCATTA AATGCAGCTATACTGATAAAATCTCTCTGCCTTTTTATTGCTTGCAGGAAAACTTTGCCTGTGGAGGAAATCCTAACCAT TGACATCAAACCCGGGTGGAAAAAGGGGACAAAGATCACGTTCCCAGAGAAAGGAAATGAGCAGCCAAACATGATTGCTG CGGATCTTGTGTTTGTTATTGATGAGAAACCTCACAGTGTATTTACAAGAGATGGTAATGATTTGGTTGTCACACAAAGA GTATCACTGGCTGAAGCTCTAGCAGGCTACACTGTCCATCTCACAACACTGGATGGCAGGGCTCTGAGCATTCCCATAAA CAATGTGATTCATCCAAGCTATGAAGAGGTGGTCCCCAGGGAAGGCATGCCTATTCCAAAAGATCCTTCAAAGAAGGGTA ATCTCAGGATCAAATTCAACATCAAATTCCCAGCGAGGTTGACCTCAGAGCAGAAAGCTGGAATTAAGAAACTTCTGGCG CCATAA
CDS sequence (LotjaGi6g1v0328400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGTGGATTACTACAAGATTTTGCAGGTTGGCAAGAACGCCACCGATGATGAGTTGAAGAAAGCTTACAGAAAGCT TGCCATGAAATGGCACCCTGATAAGAACCCCACCAATAAGAAAGACGCTGAGACTAAATTCAAACAGATTTCTGAAGCCT ACGAGGTTCTAAGTGATCCTCAGAAGAAAGCAATTTATGATCAGTATGGAGAAGAAGGGCTTAAAGGGCAAGTGCCACCT CCAGATGCTGCTGGTGCTGGTGGGACCTCATTCTTCCAAACTGGAGATGGACCAACAACGTTCAGGTTCAATCCCAGAAA TGCAGATGACATCTTTGCCGAGTTTTTCGGGTTTTCAAGCCCGTTTGGAGGCATGGGTGGTGGTGGTGGAATGAGGGGTG GGTCTAGGTCCTTTGGTGGAATGTTTGGTGATGACATGTTCAGTTCATTTGGAGAAGGAAGGCCTATGAGTAAGGGGACA AAGATCACGTTCCCAGAGAAAGGAAATGAGCAGCCAAACATGATTGCTGCGGATCTTGTGTTTGTTATTGATGAGAAACC TCACAGTGTATTTACAAGAGATGGTAATGATTTGGTTGTCACACAAAGAGTATCACTGGCTGAAGCTCTAGCAGGCTACA CTGTCCATCTCACAACACTGGATGGCAGGGCTCTGAGCATTCCCATAAACAATGTGATTCATCCAAGCTATGAAGAGGTG GTCCCCAGGGAAGGCATGCCTATTCCAAAAGATCCTTCAAAGAAGGGTAATCTCAGGATCAAATTCAACATCAAATTCCC AGCGAGGTTGACCTCAGAGCAGAAAGCTGGAATTAAGAAACTTCTGGCGCCATAA
Protein sequence (LotjaGi6g1v0328400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVDYYKILQVGKNATDDELKKAYRKLAMKWHPDKNPTNKKDAETKFKQISEAYEVLSDPQKKAIYDQYGEEGLKGQVPP PDAAGAGGTSFFQTGDGPTTFRFNPRNADDIFAEFFGFSSPFGGMGGGGGMRGGSRSFGGMFGDDMFSSFGEGRPMSKGT KITFPEKGNEQPNMIAADLVFVIDEKPHSVFTRDGNDLVVTQRVSLAEALAGYTVHLTTLDGRALSIPINNVIHPSYEEV VPREGMPIPKDPSKKGNLRIKFNIKFPARLTSEQKAGIKKLLAP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 149 | 149 | 1.3E-136 | – | |
| PANTHER | 1 | 149 | 149 | 1.3E-136 | – | |
| Gene3D | 2 | 132 | 131 | 4.0E-36 | ||
| SUPERFAMILY | 3 | 131 | 129 | 1.44E-31 | ||
| SMART | 3 | 62 | 60 | 5.6E-33 | ||
| ProSiteProfiles | 4 | 70 | 67 | 24.769 | ||
| CDD | 4 | 59 | 56 | 4.18259E-27 | ||
| Pfam | 4 | 67 | 64 | 1.9E-28 | ||
| PRINTS | 6 | 24 | 19 | 1.6E-29 | ||
| PRINTS | 24 | 39 | 16 | 1.6E-29 | ||
| PRINTS | 42 | 62 | 21 | 1.6E-29 | ||
| ProSitePatterns | 47 | 66 | 20 | - | ||
| PRINTS | 62 | 81 | 20 | 1.6E-29 | ||
| Gene3D | 152 | 187 | 36 | 3.7E-9 | – | |
| Pfam | 156 | 267 | 112 | 1.6E-28 | ||
| SUPERFAMILY | 156 | 198 | 43 | 4.97E-6 | ||
| CDD | 156 | 270 | 115 | 6.10232E-33 | – | |
| PANTHER | 157 | 283 | 127 | 1.3E-136 | – | |
| PANTHER | 157 | 283 | 127 | 1.3E-136 | – | |
| Gene3D | 188 | 267 | 80 | 1.2E-26 | – | |
| SUPERFAMILY | 190 | 276 | 87 | 2.75E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi6g1v0328400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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