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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0336800 |
| Transcript ID | LotjaGi6g1v0336800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like protein kinase; TAIR: AT4G03390.1 STRUBBELIG-receptor family 3; Swiss-Prot: sp|Q6R2K3|SRF3_ARATH Protein STRUBBELIG-RECEPTOR FAMILY 3; TrEMBL-Plants: tr|I1M2A3|I1M2A3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0336800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:65114291..65120893) extracted from Lotus japonicus Gifu genome v1.2.
CTCACTCTGTTCTGTGTTTGTGTGGGCCGATAGTGGACCCTTCTCTTCTCTTCTCTTCTCTTCTCTTCGATCAACATCAA CAAATTTAATTTAATATATAAATAAACAAAAGATTTTCGAATCATAGCACAGAAAAACGTTACTTCACTCTCTGCTTTTT ACAAGAGAAAGGAAAGCAAAACAGCACAGACACAGACACAGAGTGGAGTGAGTGAGGCTCAGCTACCATCACCACCGTGC TTCCTCCACACAGACACAGTCACTCCGCCGCATCTTTATACCTGTTGCGGCTTCAGTTTTGGAAACTAACCTCTTTCAGG AAATGGGCTATACTAATTCGGTCTTGCATGTTCGAATCTTTGTCATCTCCATGGTGATTCTTACAGGGACTTTCTGTCTT GGAGAGACAGACCCGGTTGACGGTACTGATTCTTTTTTTTGTATAAGCTTATAACCCTTGTTTTAGTTTTAATTTACTAT GTTTGAATTTTTGTGCCATGCATGTTATGATTGTAAGCTAATCTGTGTTAATATGTTTTACTGTTACAGTTGCAGCAATC AGTAGTCTATATGTTGCTCTGGGCTCACCACCTCTTCTAGGGTGGAAGGCAGTGGGAGGAGACCCGTGTTTGGAACTGTG GCAAGGAGTGGCTTGTGTCTTCTCCAACATTACTGCCATGTATAGCCATCCTCCTTTTCTTGAATTATATTGGTTAAGAT TGTGTTCTTGTTGTCCTTGTAGATAATTGGTTTCTAAGGATAATGTTACATTTAGTGTGTGTTTGGATACTTAGTTGAGT GCAATTTGAATTGACTTTCATCACAATCACAGTCCATAAGAAGAATCTTTTTTTTTCTTCATTTTTTGTCTTGAAGTGGT TGTCAGTGTCTGTTTGTGTCCAAGTGTATCCAAAAATAGTTACATTTTTTATTGATAATGCTGAATGTAATCAGCTGGGG ATAATGCTTAGTACAATTTCTGTTTCGGTTGGCAGACGGCTTGGAGGCATGAATTTGGGTGGAGAGCTGGGCACTAATTT GGATTTTCCATCCATCATAGAAATGTAAGTATTTTGTGTTTCAAGATAATGGTACATGTTGCCCTGTGTTTACTGATTAC ACATTTGAACATTTCTTGTCATTCAGTATCACTGAATGAGTTAATCTGCTGCAATGCATTGTCTTTTCTTCCTTGGTAGT TGCTGACTATTGAAACAGTGAAATATGTACACGAGACTCCTATTTGCTCTAAGTCATTGGTAATTAGAGGAGTCAGTTTG TTATGGTTAATCAGGATAACTTTGCTGTTACCACTAATTGTGTGATTATTTCCACCAGAACAGAAACCTCATTAAGTTTT CTGTTTTACAATTGCACAGTGATCTTAGTGACAACCATATTGGAGGGGCCATTCCATTCACTTTGCCTCCTACTCTGAGG AGCTTGTATGTTTTCTTTATTATCTCTAAATTCATGTTTTTCTTGTTATATTTACTATTTAGTGAAACGCCAGTTGCTGG ACCTATATGCAAAAGTATACTTAACCAGGTTTTTTGGTACTTAATATGCAGGTCTCTTTCAAAAAATCTGTTAAATGGAA GCATTCCAGATGCCTTTTCCTTACTAACCCAGTTATCAAATTTGTGAGTTCGAAATATACCTGCATCTCATGAGCCATAT TGACTTATTATATTCTCTAATATGTTTCTTCATCTTGAAAGACAAGTAGCTACCCTTATATCATTAATCAATAACCTTTT TAATGGTTAATATGTAAGAACATAGTGTTATTTACATTGATATTTGTGTCTTTATTCCATACATTATTTACAGAGCTCGT GTGCTATGGCTACAGGGGTTTGGCGAGTAACAACTTGAGTGGTCAACTACCTTCCTCAATGGGGAGTTTATCATCTCTTA CCGCATTGTGAGTAACTTTTCATGCTATGAATAGATTTTGTTTTATTTCTTGTTCAATGAGGTTGTGTTTTTTATTATTC ATTTATTTATTTGCATTTGCAGAGAGTTGCAGAACAATCAACTTTCTGGAACCCTTAATATTTTGCAAGACCTTCCTATA CAGAATCTGTACAGTTCTTACCATCCAAACACTTTTTTACAGACATATTTAAATATTATCTATAAATTGTTAGAACGCAT GGGAAAAAGGAAGAAAGATTTTGGTTAAACTTGTGAAATTTATATTATGCAGGGATATAGAGAATAATTTGTTCTTTGGG CCAATTCCTCCAAAATTGTTGACTATCCCGACTTTCAGGTGAGCTGTAGTTAGAATTTTTCTTCTTCCTTTAGTCTTTTT TATCCAAATTCCCTGTTTTTCATAACCTTGTTTCAAGTATGAACAAATTGATCTTCCTGGAGAAGTCAAATGGGAAGATT TCCTACTGCATTTTGTATTATAATATGAGAAATAACAATAAACCACGAAATACTTCACTAAGGTTCTTTTACTCCAGATG TTTTAAGAATATTTTCTTGGTTTTGTTGTTTTCCATATAGCTTTAGGATCAAATGAGTTTGTTACCTTACTTCCCGATCT TTTATTCATGTTAACATAGCCGCAATTCCTGTGCAGAAAAGATGGGAATCCGTTTAATACAACTATTATTCCATCACCTC CTGCTGCAGCCCCTTCACTGGTAGATATGGCTCCATCCCCTGAAGGATCACCTTGGAATGGGGCAAATAGTCCTTTTTCC CTGACAGCACCAATTCATGCTAGTTCTAAGAAGTCTTTCATAGCTAAGAATGTCATTTGGATTGCTGCGGCAGGTTTCTC GATATTTATTGCATTGGGAATATGTCTTTTTATGTTGCTGTGCTTCAAGAGAAGGCCAGAAAAGAAAAACTCTAAGAAAC TTGATGTGGGTGTTTATGTGAAGCCTTTGAGTAAACCTACATGCAGTGACACAGTTTCTGAAGTAACTGATCCAGAAGAG AAAGGTAAATCATATTCATCTTAATCAGAGCATCTTTTTTTTCTTCTCCCTTTTTTCGGATAATAAAATTTAACTGTTGT GATCAACATTCTCAAAATTTATCTGTTGAGAAAGCACAGCATTTATATCAAGTAGTGTACCAAATTGAACAACTAATTTG ATTCTATAGACTCTAGATGAACAAGAAATATACATGAACACAGTATCTGCAACTTCAGAATGCAATAATGGTTGTGAATT AATCATCACAGGGCAGGGTTATGGGCTTTCACACCTGCAGCCACCACCACATTCTCTCCCAACCATTCCTTGTGAGAAGG TCATCATCAATCCGGCTATAACTACCAAAGTAACCAATGGACAAGTTATGACAAGTTCTATCAAAGTGTATACTGTTGCA TCACTTCAGCAATATACAAATAGCTTTGCCCAGGAAAATTGTATTGGGGAAGGCACACTTGGGTCTGTTTATAGGGCTGA GCTCCCTGATGGAAAGGTAATACTCTTCCAGTTTTTTTTTTTTTGAAATAAAGAACTCTTATGTATCATGTACCAGCTTA TCTGCTTGTATTTGTGCATTCTTTGTTCTCATTTCCTCTTTAAGGCTTATACCTCTCATTATCCATGCTTCACTGCTTGT ATTTAATCTTAATGCTTGTAGCAATATTTAGGCTTTAGCTCTTTTGTATTGCTGGGGCCTAAGTAGAGTTTTTGGGTGAG AACTGAAGCTCATTTTTGTTTGTTCAATTTTCTTCTGTGTCGCTAGTTAAACTATGATATCTTGTCTAAAAATTTCCAAG ACCATGTTAGTATTCTATTTCTGTGTGATCGCAACCAATGCTCTCATAAACTGCTTTTCCAACCCATCTAAGAACTATCT CTGAATGGTATTTTGGTCCTTGAAGCCATTCTTGGCCTAGGAAACATAGACTCATAAAAAAAACAACCATGTCGGACACA TTCATTTCAGACACTTCACAGACACCTCTAGATGTAGTTCACAACTTTTCTTCAAAATTTTCAAACGCTCATACCAATAT AATGGAAGTATCGCAATAACTAGATTATAAATAGTATTTTATGTCTAAAATGTCGCCTGCTTACATTGAATTTATTGATT CTCTCTTTTGTTTTAAGATTTGTGTTTTTATATTGATTTAGCAATACTATAAACTGCAATCAAATGATGACATACCAGTT ACCACTACCATGCAGTTTTGCAGTCCTGACTGTCCATTTTACATGGTTATAGTCCAACAGTTAATATTAGTGGTGCATTG ATGCCCCCTGACTGGGTGGCGCATCATATACTTTGCCTTGATTCATTCGTTATAAGCAATGTACTGCGTTATTATTTTCA AAGCTCTTTTAGACAACCTTTTGTTTTTTTCTTGCTTGAGGTGACCTGTTATTATGCCATTTGCATGTCTTCATTTAGTT TATTGATACTTTACATACTTATATCTTTTTTCTGCCCTCCATAGCTATTGGCAGTGAAGAAACTGAACGCTACTGCTTCC ATGGACCAGAATGATGAACAATTTCTTCAATTGGTATCCAGCATCTCAAAAATTCAGCATGCTAATATTGCAAAGCTTGT CGGCTACTGTGCTGAGTATGGCCAAAGACTCCTTGTATATGAGTATTACAGTAATGGGACCCTACATGATGCTCTGCATG GGGATGATGAACACTGTATCAAACTTCCATGGAATGCACGCATTAGGGCCGCACTTGGAGCTGCAAGAGCTTTAGAGTGA GTTTAGTGATCAACTCTTAAAATCTAATCCCATTTTGTTTAGCTAGATGAACTCAATATTGGTCATTGGATAATGCTCAA TCTTGTTTTGGTGGTTGGAAACCTAATTGTTGTATTTCAGTTAATATTATGTAAGAATATTCCTTTAGTGAGACAATAGC GATTAGTACAACTGTGGAAGTAACTAGACTAACGCATTTTCTTGACAACATTAACAATGATTAACTTTTTTTTTTTCCAT GCTTAAGGTATCTGCATGAGAGCTTTCGGCCGCCTATTGTGCATCGGAATTTCAGATCCGCTAATGTTCTCCTGAATGAA AAGTTGGAAGTATTCGTTTCTGATTGTGGATTGGGTCCTTTACTATCTTCTGGCTCTGCTGGTCAGGTATCATTTTAGTT TTAATTTCTTCAGCTATAAATTTTTAAATCATCTCTAGCTCAGGTATGTTTTGGATGATCTTGAAGTGCTTATTGAACAT ATGCAATAAAGAGCCTGAAAAAAAACATGATATTCATATGGAAGTACAAAAGCGTATGATTAGATGTATTTTGTTTGACT GAAATGAAAGCTAATTTTTTTTTCAGAACTGATAAAGATGAAACTAAGAATTAACATTAAGTGTGAAAAGAGTGAAGTTG TTCTTCATGCCACAGTGCAGTATGGCTACTAAGCAATCTTCATTATAATCTCAAATGGATTTTTGGCCTTGTTCTGTAAA CTCTTAGAAGGATATAACACTTAATGACCTACATTCCTGTTTTCCCAGTGTTCTGAGTTTCTGAAAATTTTGCTTCATAT ATTAGGAGTTTAACTGCTTTTAAGATGGCGGCAAATACTACATAGGGCTCAGACTTGATTTATTTAATTTTCCCTTGTTC TAATTTTGTTACATTTCTGACTAACTTTGCATCTGTCTCAGTTATCAGGACGCCTCCTCACATCTTATGGTTACAGTGCT CCGGAATTTGAGTCTGGAAGTTATACACAGCAAAGTGATGTCTTCAGTTTTGGAGTCATAATGCTAGAACTCCTCACTGG AAGAAAATCCTATGACAGGTGAACATTAAAGATAACTAGAATAGTTCATTGAAGCCACATTAAAAATATTGGATTTGGCT AAGACGGCACGATACATGTTTCAGGTCACTGCCTCGTGGGGAGCAATTTTTGGTCAGATGGGCAGTTCCTAAACTTCACG ACATCGATGCATTGTCAAGAATGGTTGATCCTTGCTTAAACGGAGCCTATCCTATGAAGTCCTTGTCGCGTTTTGCGGAT ATTGTTTCTTCATGTATACAGGTAATTCTTCAACCAGTCAATAAGCGAGTGTTCATTTCACCTAATTGCCTATCATTTAT CTATATTTTGATGATATTTCTTCCAGCGTGAACCTGAATTCCGTCCAGCTATGTCTGAAATTGTTCAAGATCTGTTGCTA ATGCTGTAAGAGGACATGTAAGATGAAACTGCCTTTGCCTAGTGGAGCCAAAAGCGGAGTTTGGTTCCCAGATTTTCCTT AGTTTAACCTATCAATTCTTTCTTTCATTTAATTTGATTGGTTTTTTATGCATGTGGAAATGCTGCATACTAATGTAATT GAGCTAGCATATAGTGCTCTGCCGAAAATTTTATCATTTAGGGTTCATATTTTTATATGTGTGTTTGTGTGGGTGTGTTA TTTATTGATAAGAAGATATCTTGGGCTCGGATTAATAATTTTCAATACACTTTCCCACCGTGCACAACATGAGTCAGTGA CTCATCCTAGAACCCGCCAATTTATTAGAGCTTAAATAAGGATGAGTCATTTAAACAAGTACCTACGTAGTGCATGTTCG AATGCATGGTAGATTTTAACATTGAAAGGAGAATTGATTCCGG
CDS sequence (LotjaGi6g1v0336800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCTATACTAATTCGGTCTTGCATGTTCGAATCTTTGTCATCTCCATGGTGATTCTTACAGGGACTTTCTGTCTTGG AGAGACAGACCCGGTTGACGTTGCAGCAATCAGTAGTCTATATGTTGCTCTGGGCTCACCACCTCTTCTAGGGTGGAAGG CAGTGGGAGGAGACCCGTGTTTGGAACTGTGGCAAGGAGTGGCTTGTGTCTTCTCCAACATTACTGCCATACGGCTTGGA GGCATGAATTTGGGTGGAGAGCTGGGCACTAATTTGGATTTTCCATCCATCATAGAAATTGATCTTAGTGACAACCATAT TGGAGGGGCCATTCCATTCACTTTGCCTCCTACTCTGAGGAGCTTGTCTCTTTCAAAAAATCTGTTAAATGGAAGCATTC CAGATGCCTTTTCCTTACTAACCCAGTTATCAAATTTGGGTTTGGCGAGTAACAACTTGAGTGGTCAACTACCTTCCTCA ATGGGGAGTTTATCATCTCTTACCGCATTAGAGTTGCAGAACAATCAACTTTCTGGAACCCTTAATATTTTGCAAGACCT TCCTATACAGAATCTGGATATAGAGAATAATTTGTTCTTTGGGCCAATTCCTCCAAAATTGTTGACTATCCCGACTTTCA GAAAAGATGGGAATCCGTTTAATACAACTATTATTCCATCACCTCCTGCTGCAGCCCCTTCACTGGTAGATATGGCTCCA TCCCCTGAAGGATCACCTTGGAATGGGGCAAATAGTCCTTTTTCCCTGACAGCACCAATTCATGCTAGTTCTAAGAAGTC TTTCATAGCTAAGAATGTCATTTGGATTGCTGCGGCAGGTTTCTCGATATTTATTGCATTGGGAATATGTCTTTTTATGT TGCTGTGCTTCAAGAGAAGGCCAGAAAAGAAAAACTCTAAGAAACTTGATGTGGGTGTTTATGTGAAGCCTTTGAGTAAA CCTACATGCAGTGACACAGTTTCTGAAGTAACTGATCCAGAAGAGAAAGGGCAGGGTTATGGGCTTTCACACCTGCAGCC ACCACCACATTCTCTCCCAACCATTCCTTGTGAGAAGGTCATCATCAATCCGGCTATAACTACCAAAGTAACCAATGGAC AAGTTATGACAAGTTCTATCAAAGTGTATACTGTTGCATCACTTCAGCAATATACAAATAGCTTTGCCCAGGAAAATTGT ATTGGGGAAGGCACACTTGGGTCTGTTTATAGGGCTGAGCTCCCTGATGGAAAGCTATTGGCAGTGAAGAAACTGAACGC TACTGCTTCCATGGACCAGAATGATGAACAATTTCTTCAATTGGTATCCAGCATCTCAAAAATTCAGCATGCTAATATTG CAAAGCTTGTCGGCTACTGTGCTGAGTATGGCCAAAGACTCCTTGTATATGAGTATTACAGTAATGGGACCCTACATGAT GCTCTGCATGGGGATGATGAACACTGTATCAAACTTCCATGGAATGCACGCATTAGGGCCGCACTTGGAGCTGCAAGAGC TTTAGAGTATCTGCATGAGAGCTTTCGGCCGCCTATTGTGCATCGGAATTTCAGATCCGCTAATGTTCTCCTGAATGAAA AGTTGGAAGTATTCGTTTCTGATTGTGGATTGGGTCCTTTACTATCTTCTGGCTCTGCTGGTCAGTTATCAGGACGCCTC CTCACATCTTATGGTTACAGTGCTCCGGAATTTGAGTCTGGAAGTTATACACAGCAAAGTGATGTCTTCAGTTTTGGAGT CATAATGCTAGAACTCCTCACTGGAAGAAAATCCTATGACAGGTCACTGCCTCGTGGGGAGCAATTTTTGGTCAGATGGG CAGTTCCTAAACTTCACGACATCGATGCATTGTCAAGAATGGTTGATCCTTGCTTAAACGGAGCCTATCCTATGAAGTCC TTGTCGCGTTTTGCGGATATTGTTTCTTCATGTATACAGCGTGAACCTGAATTCCGTCCAGCTATGTCTGAAATTGTTCA AGATCTGTTGCTAATGCTGTAA
Protein sequence (LotjaGi6g1v0336800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGYTNSVLHVRIFVISMVILTGTFCLGETDPVDVAAISSLYVALGSPPLLGWKAVGGDPCLELWQGVACVFSNITAIRLG GMNLGGELGTNLDFPSIIEIDLSDNHIGGAIPFTLPPTLRSLSLSKNLLNGSIPDAFSLLTQLSNLGLASNNLSGQLPSS MGSLSSLTALELQNNQLSGTLNILQDLPIQNLDIENNLFFGPIPPKLLTIPTFRKDGNPFNTTIIPSPPAAAPSLVDMAP SPEGSPWNGANSPFSLTAPIHASSKKSFIAKNVIWIAAAGFSIFIALGICLFMLLCFKRRPEKKNSKKLDVGVYVKPLSK PTCSDTVSEVTDPEEKGQGYGLSHLQPPPHSLPTIPCEKVIINPAITTKVTNGQVMTSSIKVYTVASLQQYTNSFAQENC IGEGTLGSVYRAELPDGKLLAVKKLNATASMDQNDEQFLQLVSSISKIQHANIAKLVGYCAEYGQRLLVYEYYSNGTLHD ALHGDDEHCIKLPWNARIRAALGAARALEYLHESFRPPIVHRNFRSANVLLNEKLEVFVSDCGLGPLLSSGSAGQLSGRL LTSYGYSAPEFESGSYTQQSDVFSFGVIMLELLTGRKSYDRSLPRGEQFLVRWAVPKLHDIDALSRMVDPCLNGAYPMKS LSRFADIVSSCIQREPEFRPAMSEIVQDLLLML
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 272 | 272 | - | – | |
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| TMHMM | 7 | 24 | 18 | - | – | |
| Gene3D | 33 | 236 | 204 | 3.6E-30 | ||
| TMHMM | 34 | 56 | 23 | - | – | |
| SUPERFAMILY | 36 | 207 | 172 | 7.56E-25 | – | |
| PANTHER | 56 | 181 | 126 | 1.2E-172 | – | |
| PANTHER | 56 | 181 | 126 | 1.2E-172 | – | |
| Phobius | 273 | 297 | 25 | - | – | |
| TMHMM | 273 | 295 | 23 | - | – | |
| Phobius | 298 | 673 | 376 | - | – | |
| PANTHER | 352 | 671 | 320 | 1.2E-172 | – | |
| PANTHER | 352 | 671 | 320 | 1.2E-172 | – | |
| Gene3D | 359 | 472 | 114 | 1.5E-30 | – | |
| SUPERFAMILY | 375 | 670 | 296 | 2.87E-65 | ||
| ProSiteProfiles | 395 | 671 | 277 | 33.517 | ||
| Pfam | 398 | 669 | 272 | 1.5E-39 | ||
| Gene3D | 473 | 673 | 201 | 8.3E-46 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0336800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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