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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0348900 |
| Transcript ID | LotjaGi6g1v0348900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dynamin, putative; TAIR: AT4G33650.1 dynamin-related protein 3A; Swiss-Prot: sp|Q8S944|DRP3A_ARATH Dynamin-related protein 3A; TrEMBL-Plants: tr|V7BTI1|V7BTI1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0348900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:66158641..66166872) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGGACGATGGCGTTGCACCTCCTCCATCATCTTCCACTCCTCCGGCGGCTCCTTTGGGTTCAACCGTGATCTCATT GGTCAACCGTCTTCAGGACATTTTCTCCCGTGTTGGCAGCCAATCCACCATCGACCTTCCCCAAGTCGCCGTCGTCGGTA GCCAGAGCAGCGGCAAGTCCAGCGTCCTTGAAGCCCTCGTCGGCCGAGACTTCCTCCCCCGTGGCAATGAGATTTGCACG CGCCGCCCACTCGTGCTCCAGCTCGTCCAGACCAAGAAGAACCCTGATGGCTCTGACGAAGAGTACGGCGAGTTTCTCCA CTTACCTGGCAGGAAATTCTTCGATTTCTCCGATATTTGCCGCGAAATTCAGGTATCATCCCTTTCTCTTTGTTAATATA TGCATACAGAAGCCCTTTCTATTTCCTTGATTGATTTTGTTCTCACATGGTACTTAGTACATGTAAGTTGAAGTGGAAAA ATCCCTAGCGTTAGATTTCCTTGTAATTTAGGAGTATAGTGTGAAGAGAGTTCTATGTTTAGCTCTTAGGAGTGATGTGG AGCAAATCCATGAGGCTATTTAGATTCTAGAGTTTTGCTGCCGGCGGGATCAATCTTATAGTCCACAGTTTATTCATTGT GAAATCCTTGATTTGTCTAGCTGTTGGAATGTGGAACAAGTATGAGTAGGTTAATGAGCAGACGTGTGGCAAGGAGTGCA GTATTTGAATTCTTGGAGCAGCCATGCTATATGGCTCCAAGAGAGAGTGAATTAATTCAAATAAGGCGTCTTTTAAACTG CTTAGTGACCATTCGAGGTCGTTGCTGATTTTTTATTTTTATTTTAAATTTTTAATGTTACCCAATTAAAGCGTGCCAAT ACTTATGGACGAAATCAATGGAATCTTAGCAGGCTTGAAGTATTTTCTTACCTTAAATAAGACTGCTTAGTCGCATTGCT TGAACCTGTGCCCTTGAGATCTGAAGTTTCCTTACTTATCGTTTTGGATGAGAGGGTGTTGTTCATTTTAGGCCATAACC TTGGAGTTAAGTGATTCTTCGGATTATTTAGAGAATTAGAGCTTGTTTGTCAGGCAACAAAACAAAAATTCTGTCTTGTA GAAAAGGAGGGTAGTTCTTACTTTTCCATTTTAAGCGTCAAAACGAGGAGAGGTTGTTACACACGCAGGCTCTTATTATG TCAAACATGATGTGCTTTTTTTGGCTGAGGCTCGCGATGGGCTATTGGGCTCTTTTATCCTTATCGTAACATCACTTTGT CTTGTTTATGTCTGACTGTCGGGAAGGAAGAAACCTTAACATCACTGAAGTAAATAAATAAAGGGTGACCTGCCCCTTTC AATTATAATGACTATTTTCTCTAACTCGAGAAAATACCAATTTGCTTTCTCTATTTACTCATGAGACACTCACATGCACA TCCAAATTAACCACCTCAGCATGGTGTTGAGCTCAATTGCAATCCAACAATGATCCTCAATGGTCACGTAACGTCCATAT ATTTGAAGTTGATTATATGAGTTTATGGCATCCAATGGTCCAACCATGGAGTGGAACAAATTGATATTTTTTAGACTTCG TCTTACGGCATTAGTGAATCGGAGTACAATTGAATGTAAAATAGTTTGAATGAGGTTTGAGGGATATTGTTTTCTCATTT GTTAATGCAGCTTTGAGTACACCATCATCTACATATCTACAATGTGGACTGATAATTACTGACTTTGTTAGAGGTGCATC ATCCAATCGAACTTGTTTTCATGTTTTATATAGCATGCAATGATGCTCTTGGTGAGGATATACTGATATGGCATGTTATG TACTAGTTTAATCCTTCATACGTGACTGTTAACTCGTATATGTTCATCCTTTTTCTGTAGGCTGAAACTGATAGAGAAGC AGGAGGGAATAAAGGTGTCTCAGACAAGCAGATTAGGTTGAAGATTTTTTCACCGACTGTTCTTGATATCACACTTGTAG ATCTCCCTGGCATAACAAAAGTTCCTGTTGGTGACCAGCCTTCCGATATTGAAGCCCGAATCAGAACAATGATTATGTCA TATATCAAAACTCCAACCTGTCTCATTCTAGCTGTCACAGCAGCAAATTCAGATCTGGCTAATTCTGATGCTCTTCAGAT GGCAGGAATTGCTGATCCTGATGGTGGGCTTTTCTTCCATATGTAAATTAAACCAAACAAAATCAAATTTCTTTAATAAG TTATTGAATGTTCATATATCTGTTGCAGGTAATAGAACGATTGGTGTGATTACAAAGGTTCGGTATTCTCTTCTAACATG TTAACTTACATGTATATTTGTGAGTTTTGTTGTGCTGTTGCCATGTTCTGACAATGTTGGGAACATCATATTATTTGCAA TGTAGTTGGATATCATGGACAGAGGTACTGATGCCCGAAATCTGTTACTAGGAAAAGTTATTCCCCTTCGACTTGGTTAT GTAGGGGTTGTAAATCGTAGTCAAGAGGTAATGATGTTATCCTACTGTGACAAAGGAAGTGTTTGGCTAATTTAACTGTT ACACGTATTCTATTAAATATTTTTTTAAATTACTGGTTGTTAAATAGGCACATGTGAAGTGTTTGACTAGCATGCAGGTC AATGTTTTATACTGAAAATGGCTTGTCTATTGTTTCATCTAATTAGGATATTCAAATGAACCGGAGTATAAAGGATGCTC TTGTTGCCGAAGAGAAGTTTTTCCGCAGTCGTCCTGTAAGGAGCTTTCTATGTTAAGATGTATTTTGCTCATATATACGG AATTTTATCCATTTATGCTATTTTTAGGTATACAGCGGTCTAGCAGATAGTTGTGGTGTTCCTCAACTAGCAAAGAAGTT GAATCAGGTATAGTCTTTATGATGTTGAAGACACAAATTGTCTTATATATATGTTTATTACTTTTAAAATGCTGGTCTTA ATTAGGGCTTTTGGCCTTCTATTATCCATGCAGAGTAAAGTGTCCTCTTAAGTCTTCCCACTTTTTCCATTTTTTTAATT GACTCTAAACTCCGTCCTTAGCATCATTTGATTTAATCCTTTTAACTACAGAAGGCAGCTTTGAAATAAAGAAACTTAAC TGCGTCATCTTCAATGCTGCTGATTTTTCTGGCTTTGGAATTTTGCTTTCTATAATTTGTAATGTAGCATACTTTAAAAA AGGAGATGAAGGAGAATCAAAATAATGAACCTTAGAGGATTTATTTGTTGCTTCGGTCTGTTAGGGATTTAAAGAGTTTA AGGAGAATATGGCCAAGTTATAACTTTCTCAGACAAAATGCAAGCTATGTCAACATTTGAGAGGGAAAGTTTTTAGATGA TTATTGGAAATCCACAGTAAAAGAATTAATTTCTTAGATACCCTGTAAAAGATTAAACCTTTGAGTCCTTGTCAAGTTGG GGTTTCTAGACCGATGCTTGTCATAAATATTTTCATGTCCAACTCTTTGCAGATTCTAGCACAACATATCAAGGCCGTGT TACCTGGTTTGAGAGCACGGATAAGCACTCAACTAGTTTCTGTTGCAAAGGAGCATGCAAGCTATGGAGAAATCACAGAG TCCAAGGTATGTGTTAATACTGGAATTGGTGCTGGATGTGTCCCTATTCCCTATTACTTGTTAAATAATAAAAACAGTTA AATAAACTGTATAAGTATGACTATTCTCCTTATTTTGATTAAAAAGCAGCATAATATCTACTTTGGTTCGAGTTTCCCTT TTTTTATCTATAATTGTTCATTTTGATAGGCTGGTCAGGGTGCTCTTCTCCTGAATATACTTTCTAAATATTGTGAAGGT ACCTATCCTTACTATCTGACTTCTTAGATAATATTCAGCTTTTGTATTTGTGAATTTGTAGTTTTCTTTTCTCTTGTATA TGTTGATTGGTATTCCACACTTTGTTATTTTCCCAATTCATTAAATGCTATCTCCATTTGTTTTTTGAAAACAGCATTCT CTTCCATGGTTGAGGGAAAGAATGAGGAGATGTCTACGTCTGAGTTATCTGGTGGAGCACGAATCCATTATATTTTTCAA TCCATCTTTGTCAAAAGTTTAGAGGTATGTAATGCTGTATTAATATATGATATAATGATAGTGTTGGAAATTACCTACTC TTGCTGCATGCTTGAATTAAAGAAGGAAAAAGATTAGGCTTTAATTAACATATTATTAGCCGATTTGTAGCGTATTTTCT TTGTTATGGCCGATATCTTGCCTACCCATTTATCTATTTGATAAAAACCCATAGATCCCTTTGTTGCATTTCGCGGATGG ATGATTAACTAGCCAATCACCTTATGCATTGTTTAATATCATTCTAACAGTGAAAATTAGTAGCTTGTTTATTTCAAATA ACATTATCATCTTGAGAAAGGAGAATATTCTTATTATATGCTTTAGGAAAAATAAGTATTTGATGCCATTGCCACCAACC TAAGAATTGTATTGCTTCTGTTCATTTCTTCAAAGCTAGCTGCCTTAGCTTTATTGTCTAACTTAATGCTGTCTTGAAGG AGGTGGATCCATGTGAAGACTTGACTGATGATGATATTCGTACAGCCATACAGAATGCCACTGGGCCTAGATCAGCATTG TTTGTTCCAGAAGTAAGTCTTGCTACCTGCTTTTTTTTCTTCTTTTAAGAAAAAAAAGATAAGTTAAATCCCACTCAAAA CATGTTTATCTATTATTTCTATGTAATTAGGTGCCATTCGAAGTCCTTGTACGAAGGCAGATATCTCGTCTATTGGATCC AAGTCTTCAGTGTGCCAGGTTTATATATGATGAACTAATTAAGGTAGGAGCAGGGATTTTGGGAACCATTTCTGCTTGAT CCTTCACCAAGCATGTGCCTAAACAATTTCCTTCTTTTCAGATGAGCCATCGCTGTATGGTGACTGAACTGCAGCGGTTC CCTTTCTTGCGAAAGCGCATGGATGAAGTTATAGGAAACTTTTTGAGGGAAGGCCTTGAACCCTCAGAGAACATGATTGC GCACATCATAGAGATGGAGGTATGCTCAAATTTAACTTGCTTGAAGTATAAATGTATAATTGCTCCATCTTCTAGCTACC TTCTGATGCAATGATTATGTTAATAATAAATTTTCAAAACTCCACTAGGTTACAGGGCCAAAGCATGGTTACACTTGATA AATCCTACCAAAATTGTTTGAAATTATAACTGAAACTGATCATCTGAAACCGATAAAAGTGTAATTCTTGATGACACTCA ACTGTAATCATGCAGTTGAAGGTGATAACAAGAATTATTTATATTGATCCCAACTCCTACATTTCCATAATATTATTTCA TCCATTGGAGCTTTGGAGTGATAGCTGGTGGTGGTTATGTTAAAGCTTTACTTTCTTCGAACACGGTTGTGGTTCAGAAA ATTCATCAAAACTGAAATGATTTTTACTTATGATTGCTTAGTTGGTCCAGGATGGGTTGGATTGCTATTTTAACTGTTAT CTTAACAGTGGTATGTATTCTCTCTCTTAAAATGAAAGCAAAGATTGTTTCAATTAAAGATGTTCATAAGTTTTGGGAGT CTAGTGGAAGCCAAGATGTCATGCATCAGTATGTCGGCCTATGGGTGTCAATTTTGATTGCCAGTTTATTACAGTGAGTC TTTAATTCCATACCCATAATTTCTTATTTAAATTTAAACTTTTCAATTCTGCAGATGGACTACATAAATACTTCCCACCC AAATTTTATTGGTGGAAGTAGGGCATTAGAATTTGCAGTGCAACAGACCAAGTCTTCTAGAGCCGCTTTATCAGTTTCTA GGCAGAAGGTACACATGGGCTCTAGTTTTCAATATGTCCTATGTATTAGGATATCAGTTTCAATTTATGCCCACCTTTCT TGTTCTTAATTGTTGTATTAATCACTGGTAGGATGGTCTGGAATCTGATAAGGGATCAGCCTCTGAAAGAAGTGTGAAGT CTCGGGCTATTCTTGCAAGACAAAGTAATGGAGTAGCTGGTGATCAGGTTTGTAATTATAGATTATGTTTAATTGACTCA AAATTTTCCTTCATATCTTGTGGGATATTATATTAGTATCTCATTATTAACACTTATTGACGGTAAAAATAAAAAACAGG GTGTCCGTGCTGTATCAGAGATTGAAAAAATTGCACCTTCTGGTAATCTATTTCTTCTATTTAATGTTTAAGTTCATTCC ATTTGTTTTATCATATATTTGCTATTGAACTTCTCTTTTTGTTGTCTAATCTCAATCAAGTGGTTTTGGTATATCAACAA GCACCAATATCATTTTAAGACATTTAAATTTTCAATGCTTGATACTTTTTCAGGAAACACTGGTGGATCAAGTTGGGGTA TCTCATCCATTTTTGGTGGAGGTGATAGCCGTATGTCCGTGAAGGAGAATATAGCCAGCAAGCCACATACTGAACCAGTT CACAGTGTGGAACAATCATTCTCTATGATCCATTTGAGAGAGGTGAATATGTGTGATACATTTATTATCAGCTTGGTCAA TATGTTCCCTAGGGTCTAAATTTTCATATGCACTTTGGTTTTTGTAGCCACCTACTATCTTGAGGCCATCTGAGAGCAAT TCAGAGACGGAAGCTATTGAAATTACAGTAACAAAGTTGCTTTTGAAGTCATACTATGACATTGTCAGAAAAAATGTTGA GGATTTTATCCCCAAAGCAATTATGCACTTCTTGGTAATTCATATCATTGCTTTAAGCCTTACAACTCATCCGCTTCCAT TGTTCTGTTGTGTGGCATACAGAAAAATATGTTCTCATTGTCTTTATTCATTTTCTAGAGAAAAGCTTGTGGCCAACACA ACATAACTTCACCATTACAGCATTACTTCAATCATAAAATAAATATGTGGCACAGTAATTAATGTAATTTATATTATAAA TGATTATAAAGATATATATCTATATCAATACTTAATGTTTAAACTACGCTATATTTTATTCATATATAACATGACTTAGA AAAGAGGTGTAATTTTTGTCTATAACGTGACTTAACGACAATTTCTGCTAGATCTGACGCATATCTTATCTACCTTTATT CCTATGGATAGCAAAATTGATGAGTAGTTGCAATTGCTCTCATTCTTGAATTTAAGTATATCGTATTTGACCATCTGAAA TTATTTTTGGTTGGCGGCTGGTAGTAGAAGGGGGAAGGGATGCTAATTCTTTTGTTTGAATCGTAATATTTACCATATGC TTTGGAGTGATTGAGAATTCTTGAAATTTCACGCATTCCATAAATCCTCATGACTGTCTTTTACTGAACATATTAGGTAA ACAACACCAAGAGAGAGCTGCACAATGTCTTCATTAAAAAGCTATACAGGTAATATAATCCTTATGGCCTGCTTATTCTT TATGATATATGTAAAGTTTTGTCTAAATTTTTGGCTGATACTTTTTATTTTATGTTACATTCAAACCAGAGACAATCTGT TTGAAGAGATGTTGCAAGAACCTGAGGAAATAGCCATGAAAAGAAAGCGTTGTCGAGAACTTCTCCGAGCTTATCAGCAG GCTTTTAAGGTTGGATATTCCTGAATTTCTGAGACTTTAACTGGCCAAGTTTTTGTTATTTTACGCGGCATATTTGGTCT CTTTTATTTAAATTTTTTGCTTCTGCATTGTGGGGATGTTTGTGATCTTTGCGCGTGCATGCGTGTGATCAGTTTTCTGT GAATCTAAAGTAAATTACAAGGGTTGCAACATGATGCAGCACTTCTTTTGTACATGCATGCTTTTGACTTGTCATTGGTG CCGAGTCGTCTTTTTTCTCACTAGTCCCAGATGCACTTGTTGAAGATTTATTTATTTTATATAAGAACACCGGTAGCAGT ATAACCACTATTTGACAAAACTGTGTTCGATCCTGGTAGGACTTGGAGGAGCTTCCTATGGAAGCTGAAACAGTTGAAAG AGGATACAGTTTACCTGAAACAACTGGTTTGCCTAAAATTCATGGATTACCTTCATCAACAATGTATTCTTCAAGCAGTT CTGGAGACTATTATGGAGCTTCTCCGAAGCACACCAAGTCAAAAAGGTCTTCCCATTCTGGGGAACTTCAGTCTCCATTG TATGCTAATGCAGATTCCAATGGAAGTGGAAGGACTTACCCGTCAGGTTATTATCCCACAGTTGATGCATGA
CDS sequence (LotjaGi6g1v0348900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGACGATGGCGTTGCACCTCCTCCATCATCTTCCACTCCTCCGGCGGCTCCTTTGGGTTCAACCGTGATCTCATT GGTCAACCGTCTTCAGGACATTTTCTCCCGTGTTGGCAGCCAATCCACCATCGACCTTCCCCAAGTCGCCGTCGTCGGTA GCCAGAGCAGCGGCAAGTCCAGCGTCCTTGAAGCCCTCGTCGGCCGAGACTTCCTCCCCCGTGGCAATGAGATTTGCACG CGCCGCCCACTCGTGCTCCAGCTCGTCCAGACCAAGAAGAACCCTGATGGCTCTGACGAAGAGTACGGCGAGTTTCTCCA CTTACCTGGCAGGAAATTCTTCGATTTCTCCGATATTTGCCGCGAAATTCAGGCTGAAACTGATAGAGAAGCAGGAGGGA ATAAAGGTGTCTCAGACAAGCAGATTAGGTTGAAGATTTTTTCACCGACTGTTCTTGATATCACACTTGTAGATCTCCCT GGCATAACAAAAGTTCCTGTTGGTGACCAGCCTTCCGATATTGAAGCCCGAATCAGAACAATGATTATGTCATATATCAA AACTCCAACCTGTCTCATTCTAGCTGTCACAGCAGCAAATTCAGATCTGGCTAATTCTGATGCTCTTCAGATGGCAGGAA TTGCTGATCCTGATGGTAATAGAACGATTGGTGTGATTACAAAGTTGGATATCATGGACAGAGGTACTGATGCCCGAAAT CTGTTACTAGGAAAAGTTATTCCCCTTCGACTTGGTTATGTAGGGGTTGTAAATCGTAGTCAAGAGGATATTCAAATGAA CCGGAGTATAAAGGATGCTCTTGTTGCCGAAGAGAAGTTTTTCCGCAGTCGTCCTGTATACAGCGGTCTAGCAGATAGTT GTGGTGTTCCTCAACTAGCAAAGAAGTTGAATCAGATTCTAGCACAACATATCAAGGCCGTGTTACCTGGTTTGAGAGCA CGGATAAGCACTCAACTAGTTTCTGTTGCAAAGGAGCATGCAAGCTATGGAGAAATCACAGAGTCCAAGGCTGGTCAGGG TGCTCTTCTCCTGAATATACTTTCTAAATATTGTGAAGCATTCTCTTCCATGGTTGAGGGAAAGAATGAGGAGATGTCTA CGTCTGAGTTATCTGGTGGAGCACGAATCCATTATATTTTTCAATCCATCTTTGTCAAAAGTTTAGAGGTATGTAATGCT GTATTAATATATGATATAATGATAGTGTTGGAAATTACCTACTCTTGCTGCATGAGGTGGATCCATGTGAAGACTTGA
Protein sequence (LotjaGi6g1v0348900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADDGVAPPPSSSTPPAAPLGSTVISLVNRLQDIFSRVGSQSTIDLPQVAVVGSQSSGKSSVLEALVGRDFLPRGNEICT RRPLVLQLVQTKKNPDGSDEEYGEFLHLPGRKFFDFSDICREIQAETDREAGGNKGVSDKQIRLKIFSPTVLDITLVDLP GITKVPVGDQPSDIEARIRTMIMSYIKTPTCLILAVTAANSDLANSDALQMAGIADPDGNRTIGVITKLDIMDRGTDARN LLLGKVIPLRLGYVGVVNRSQEDIQMNRSIKDALVAEEKFFRSRPVYSGLADSCGVPQLAKKLNQILAQHIKAVLPGLRA RISTQLVSVAKEHASYGEITESKAGQGALLLNILSKYCEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLEVCNA VLIYDIMIVLEITYSCCMRWIHVKT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 18 | 398 | 381 | 2.5E-252 | – | |
| PANTHER | 18 | 398 | 381 | 2.5E-252 | ||
| SMART | 21 | 268 | 248 | 2.0E-117 | ||
| Gene3D | 24 | 339 | 316 | 5.4E-159 | – | |
| SUPERFAMILY | 25 | 324 | 300 | 5.6E-79 | ||
| ProSiteProfiles | 43 | 316 | 274 | 60.37 | ||
| CDD | 44 | 316 | 273 | 7.46205E-142 | ||
| PRINTS | 46 | 64 | 19 | 7.7E-56 | ||
| Pfam | 49 | 228 | 180 | 1.0E-53 | ||
| PRINTS | 71 | 88 | 18 | 7.7E-56 | ||
| PRINTS | 148 | 165 | 18 | 7.7E-56 | ||
| PRINTS | 198 | 216 | 19 | 7.7E-56 | ||
| PRINTS | 217 | 233 | 17 | 7.7E-56 | ||
| Pfam | 238 | 399 | 162 | 1.6E-55 | ||
| PRINTS | 240 | 259 | 20 | 7.7E-56 | ||
| Gene3D | 340 | 399 | 60 | 5.4E-159 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi6g1v0348900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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