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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0360700 |
| Transcript ID | LotjaGi6g1v0360700.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Importin beta; TAIR: AT4G27640.1 ARM repeat superfamily protein; Swiss-Prot: sp|O60100|IMB4_SCHPO Probable importin subunit beta-4; TrEMBL-Plants: tr|I3SK10|I3SK10_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0360700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:67281697..67288020) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGCAGTCTCTAGAGCTCTTGCTGATTCAGTTCCTCATGCCCGATAACGATGCCCGCCGTCAGGCCGAGGACCAAAT CAAGCGTCTCGCCAAGGACCCTCAGGTGGTTCCTGCTCTCATTCACCACCTCCGCACTGCCAAAACCCCCAATGTCCGCC AGCTCGCCGCCGTCCTCCTCCGCAAGAAGATCACCGGTCATTGGCCCAAACTCTCTCCCCACATCAAACTCCTCGTCAAG CAATCCCTTATCGACAGCATCACCATGGAGCACAGGCACGTAATCAAATACATAATTATCCCAAATTCAATTCAGCTAAA TTCATTTCAACATCATCATCATCATCTAACTAATTCGATTCAATTTCAATCTTCTTGTGGTTGGTTGGTGTTACAGTCCC CCTGTGAGGAAAGCCAGTGCCAATGTTGTGAGCATTGTTGCCAAGTATGCTGTTCCATCTGGTGACTGGCCCGATTTACT GCCCTTCCTCTTTCAATGTAGTCAGAGTCCACAAGAAGACCATCGAGAAGTGTGTTATCTTCTTCACACCCTCTTCTTTC ATTCTTCACATTCCTCTTTCATTGACATCATGCCATCTAACTAATTGTTGTTGCTTTTGGAATTGTAAGGTGGCTCTAAT TCTTTTCAGCTCTTTGACTGAAACAATTGGGAATGCTTTTCGCCCACATTTTGCAGACCTGCAAGCTCTTCTGCTCAAGT GCTTGCAGGATGAAACTAGCAACCGTGTTAGAGTCGCCGCACTCAAGTAAGTGAATGTTCATTTTCGGTGGAATGTCTCT AGTGTACAAACTACAAAGGGATTATTATGGTATCCTATTTTTGCTTATGAAGAACCCTGCTGATTTTTTTCAGGGCCGTG GGATCTTTTCTAGAATTCACTCATGATGAGGATGAAGTGGTGAGTGACCGAGTCATGCCTTTCGTGTAGTTTTAATTATT AAATGAAATGCAAAATTTATGTTTCTACTGATTTTCATTTTTTACCAGTGTTGGCAAACTATGTGCTTTTCACCAGAAGT TAGTCAATTATTTTCAATTAGTTTATAACTGAGAAATTTCAAGGTCACATTGGTGAGAATTAATTATTTCTGCAATCAGC TTCATATTGCGTATTTTCTGACTTAAATATCATCACATGCATGCAGATTAAGTTTCGTGAGTTTATTCCAAGCATCTTGA ATGTATCAAGACAGTGCCTTGCCTCAGGAGAAGAAGATGTTGCTATACTTGCTTTTGAAATTTTTGATGAGCTGATAGAA TCTCCTGCACCACTTCTTGGAGATTCAGTCAAATCCATAGTGCAGTTCTCCCTTGAGGTTTGCTCAAGCCAAAATTTGGA ATCCAACACACGTCATCAGGTTGGTTAGGATCAGAAAGTACATTGCTACCCCTTTTTACACTCTTCCTGATATATTTTTT TCGCTCACTTGCTTTCTGTTTCTTGCTGAATCTAACAGGCAATTCAGATTATTTCATGGCTAGCAAAGTACAAGTCCAGT ACTTTGAAAAAACATAAGCTGATCATCCCTATTCTTCATGTTTTATGCCCTTTGCTTGCTGAATCAACAAATGAAAGTGA AGATGATGATCTTGCACCTGATCGAGCTTCTGCGGAAGTTATCGATACTATGGCTTTGAACATCCCAAAGCATGTTTTCT CACCTGTTTTTGAATTTGCTTCTGTAAGCTGCCAAAATGCAAACCCAAAGTTCCGGGAAGCAGCTGTTACTGCATTAGGT GTTATTTCAGAAGGTTGTTTGGAGCCCATGAAAAATAAGTTGGAACCCGTTCTCCATATTGTCCTGGGAGCTCTGAGGGA CCCGGAGCAAATGGTGAGAGGGGCAGCTTCCTTTGCTGTGGGTCAATTTGCTGAGCACTTACAGCCTGAAATTGTATCCC ATTATGAAAGTGTCCTTCCCTGCATTTTAAATGCTCTTGAGGATACATCTGATGAAGTAAAGGTACACAATGGAGAAGAA GGAAATGGTTTATTAATACAATAGAAAGATAGGTTATCTGCGGCTACCATAAAACAGTTTGTCTGCATTTTGTCTGAGCA TTATATTGAAATTTATGCAGGAAAAGTCATACTATGCTTTGGCTGCTTTCTGTGAGAACATGGGCGAAGAAATCCTTCCT TTTCTAGATCCTTTGATGGGAAGATTGTTCGCAGCTCTCCAAAATAGTTCCCGAAATCTGCAGGAAACATGCATGGTATG GGGAAGATTCTGTATTTTTTGAAGTTTGTTATAATCCTGATGAAACAGCTGTTGGTTCATTGTTTTGGTATTTAAATCTG CATTTTCCACTGGCTTGCAGTCCGCCATTGGTTCTATTGCTTCTGCTGCAGAGCAAGCATTCATTCCTTATGCTGAAAGG GTTTTAGAGTTGATGAAAAACTTCATGGTGTTAACTAATGACGAGGATCTCCGTTCACGTGCAAGAGCAACTGAACTAGT TGGTATCGTTGCAATGTCTGTAGGGAGAATGAGAATGGAACCAATATTACCTCCTTATATAGAAGCTGCAATTTCTGTAA TGACCTTAGCACTTAAAATCTGTCACCAGTTTTGCTTTTGCTCCCCTTTCCTGGAATAATTTGATTTGCTCCTGTTATTT TCAGGGATTTGGCCTGGACTTCAGTGAGCTTCGGGAGTATACCCATGGATTCTTCAGTAACGTTGCTGAGATTTTGGATG ACAGTTTTGCACAGGTCTGCATAGATTAGCTATATGTAGTTCCTTCTATATTGTGCTTACTCTTACTATTGGAATTTTGC ATTGCTAAACAGTATCTTCCTCATGTTGTGCCTCTTGCACTTTCTTCCTGCAATCTTGATGATGGCTCTGCGGTTGACAT TGATGAGTGTGATGATGAAATCGCTAATGGATTTGGAGGGGTTTCATCAGATGATGAAGCTCATGATGAGCCAAGAGTTC GAAATATAAGTATTAGAACAGGAGTACTGGATGAAAAGGCTGCCGCAACCCAAGCCCTCGGCCTGTTTGCACAGCACACA AAGATATCTTATGCCCCGTATCCTTTGACTGGACTACCTTTTTTATTTCCCTAGTTACTCCTTTCACAACAAAAATAATC TATACTAATAGGTAAGTTTGAATTCTTAAATCATATAAAGCTATTTGGACGAGACGCTAAGAATCTTGGTTAAACACTCT GGTTATTTTCATGAAGATGTTAGACTTCAGGCAATCATTTCTTTGAAACGTAAGTGGAATCTATTATATAAATGTTGGTC TATTTTCAAAGTCGTGTTTGTTTGTCTTACTTATTCTTGTTTTCTGCAGTTTGTCTCTTTTTTTTTATGCATGGAAGGAA TCTTGTACTTCTCTTAAATAATTGTTTCTGGGTTGGTTCAGAGCAAAATGCATTTTATAATCATTTTATCATTATAAAAT GGTTCTAAATTATGCAGATCAGAATACCAATAAAATGATGTATGAAACCTATTATTTAAATCGTCAATCCACACAGAAGT GTTGAGGAAAAGGAAAAATATAATTCAGCGGAAGTAAACTACCCTTTCTAGTTTGGACATTAAAATTTTCTTGTCTTGCA AATTTGTTTGCACATTCTTCTACATTATTTATTTGTGTTCTCATCTCATTTTTTATTAACTATATATATATATATATATA TATATATATATATATATATATATATATATATATGTATATATCACCGCTGAATGCTGATTTGTGTTGGATTTCAACTGCAG ACACTTTAACTGCGGCTCATGCAATCTTCCAAAGTCAAAATGTAAATCTTTGCCTCCTCTCATCTTTTCACTTTTTCCTC TTTTGAACTTTCTGTACAATTATCATCCTGTTTCCTTGTGCTATCTTTTGTATTTTGTAAACACTAGAGTTGTTACACTA TAATGGAGCTGCCATTTTGATTAGTTGACCAATTATTTTTGCTTTTCATTATTATTGTGTGGGGGTGGGCTACTACTTGA TAGCAGACAAAGAAATTGTCTTCTCTTTTATTTAAATGTTAGCTCTTTGGTTTGAACCTTTCCTTTAACTAAAGCCACAA TTGACACTGCTCTTGTTTTTCAGGAAGGAGCTGCAAAAGCAAAAGATATTCTTGGTGAGAACATCAACTGGAATAATAAA ATATGAAATTTTTGTATATGCTTGTGATTAGCCAGTTCATTTGATCTATATAACCTATTGAGTCTGGTTGGTTCAACAGA TACTGTGATGGTTATTTACATCAAGACTATGGTTGAAGATGATGACAAGGAAGTGGTTGCTCAAGCTTGTACTAGTGTGG CTGACATCATTGGAGATTATGGTTATGCAGCTCTCGAGCCTTGTAAGCATGAAAATATTTAACCTATACTTAAAAGTCAT TTTGCTAAGTTGATGCTAATGTGACATTTACTCTGATACCAGACTTGTCCCAGCTTGTTGATGCAACTTCATTATTGCTT CGGGAGCAATCTGCTTGTCAGAAGATTGACTCAGACAGTGACATCGATGATGATGATGATAGTGCACACGATGAAGTGCT TATGGATGCAGTTTCGGATCTTCTCCCTGTGTTTGCAAAGGCCATGGGTGCTCAATTTGCCCCCATTTTTGCAACGCTAT TTGAACCTTTAATGAAATTTACTGTGAGTTGTTAACTAATTAATGTTATAGTTAGAAATAAATCATAAACTAATATACTC ACTTTGAAATGCAGAAAGCTTCCCATCCCCCTCAAGATAGGACCATGGTAGTTGCTTGCCTCGCTGAAGTTGCTCAGAAC ATGGGTTCTCCTATTGCAGGCTATGTGGATGTAAATTTGTTGTTCTTTTCCTCAATCTCTCCCTCTCTCTCTCTCTATCA TTTGCTTTTATGATCTCATTTGTCACTCTTAATGAGTATTTCTAGAATTGTGATTGGTTTGTGAAGTTTATATTATTTTT TTCTCAGCGGGTGATGCCCTTGGCGCTTAAAGAGCTAGCATCATCTGACGCAACAAATAGAAGGAATGCTGCATTTTGTG TTGGAGAGTTGTGCAAAAATGGTGGTGATTCAGCTTTGAAGTATCCTTTTTCATGCTACCCATTTGATAGCTGTTGACTG GTTTTTTTGTTGTTCTTTGTGTTAAATTATGAGGAGACAATTAATATGATTATTCATGTCGATCAATATTAGAAGACATA TATCTTGTTTTTCTGGTTTACATCATGTCCTATATACCGTGCATTTTTTTTAATGTACCTTGCATTTTCCTTTATTTATT ATTTTCTTTAATCCAATACAAGATACTATGACAATGTATTACGTGGACTTCATCCCTTGTTTGGTGAGTCTGAGCCTGAT GATGCAGTGAGGGATAATGCAGCTGGTGCTGTGGCAAGGATGATTATGGTACACCCTGAATCTATCCCATTAAATCAGGT AATTTCCTGCTTTATTTTTATGGCTCGCTCACTCAATTAAAACCTTTTTTTATTTAATATTTAGAGGTCATCTGTTTCAG CTTTTTTTAATGGAAAATTCACTTTTATATTGAAAAACTGTATTTTTTTAATATAGTCTGTTAGTTCTTTTGAAAAAAAA TCAGAATATGAAGAAAAAAAAATCAAATTTCTGATTATCTTGAGAAGCTAACTACCTTTCAAGTTTCAAAATAAGAGATC ATTTTCTAGTTGTAATCAAATGAAACTTAGTTTGTACTTTGCATAAAATCTCTTAAAACTAAATAACTTGTTTATACATT TTCTAAATCAGTGATCAGTTTATTCTTAAGCTTATACAAACAAGCACTAAAACTTAAGTACATTTCACTTCTAATGTCTC GATCTTTATTTTTTGTGTGGATGCTTGTTAGCTAAATATTTCATTTTAAATTTCTGGGATGCTTTTTACAGGTTGTTCCT GTTTTCTTGAGAGTTCTTCCATTAAAAGAAGACCATGAGGAGTCTATGGCTGTCTATAGTTGTGTCTCTACTTTAGTTGT CTCATCCAATCCACAAGTAATTGTTTCTCTTTAGACCTGTTAAGATTCTTGCTTTCTTTTGTTGTTCACCCAATGGTAAT ATTGCCTTCCTAATTCTGTTTTCTGATTCTAAATATAATGCAGATCCTTTCCCAAGTCCCTGAATTAGTTAATCTTTTTG CTCATGTGGTGGCATCACCTGTGGAGACATCTGAAGTTAAAGCTCTAGTAGGCAGAGCTTTTTCTCATCTTGTTTCATTA TATGGTCAACAAATTCAACCCCTTCTGAGCAATCTCCCACCTGCACACGCAAATGCATTATCTGCATTTGCCCCAAGGAG TTGA
CDS sequence (LotjaGi6g1v0360700.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGAAAGCTTCCCATCCCCCTCAAGATAGGACCATGGTAGTTGCTTGCCTCGCTGAAGTTGCTCAGAACATGGGTTC TCCTATTGCAGGCTATGTGGATCGGGTGATGCCCTTGGCGCTTAAAGAGCTAGCATCATCTGACGCAACAAATAGAAGGA ATGCTGCATTTTGTGTTGGAGAGTTGTGCAAAAATGGTGGTGATTCAGCTTTGAAATACTATGACAATGTATTACGTGGA CTTCATCCCTTGTTTGGTGAGTCTGAGCCTGATGATGCAGTGAGGGATAATGCAGCTGGTGCTGTGGCAAGGATGATTAT GGTACACCCTGAATCTATCCCATTAAATCAGGTTGTTCCTGTTTTCTTGAGAGTTCTTCCATTAAAAGAAGACCATGAGG AGTCTATGGCTGTCTATAGTTGTGTCTCTACTTTAGTTGTCTCATCCAATCCACAAATCCTTTCCCAAGTCCCTGAATTA GTTAATCTTTTTGCTCATGTGGTGGCATCACCTGTGGAGACATCTGAAGTTAAAGCTCTAGTAGGCAGAGCTTTTTCTCA TCTTGTTTCATTATATGGTCAACAAATTCAACCCCTTCTGAGCAATCTCCCACCTGCACACGCAAATGCATTATCTGCAT TTGCCCCAAGGAGTTGA
Protein sequence (LotjaGi6g1v0360700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQKASHPPQDRTMVVACLAEVAQNMGSPIAGYVDRVMPLALKELASSDATNRRNAAFCVGELCKNGGDSALKYYDNVLRG LHPLFGESEPDDAVRDNAAGAVARMIMVHPESIPLNQVVPVFLRVLPLKEDHEESMAVYSCVSTLVVSSNPQILSQVPEL VNLFAHVVASPVETSEVKALVGRAFSHLVSLYGQQIQPLLSNLPPAHANALSAFAPRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 215 | 215 | 8.8E-33 | ||
| PANTHER | 5 | 178 | 174 | 2.0E-29 | – | |
| SUPERFAMILY | 5 | 194 | 190 | 3.0E-28 | ||
| PANTHER | 5 | 178 | 174 | 2.0E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein import into nucleus | The directed movement of a protein from the cytoplasm to the nucleus. |
Expression pattern of LotjaGi6g1v0360700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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