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IPR040122 is a Importin beta family.
<p>This family consists of the karyopherins importin-beta and transportin. Importin subunit beta-1 forms a complex with an importin alpha subunit. The importin complex is required for nuclear protein import. Importins bind to NLSs in their protein cargos to transport them through the nuclear pore into the nucleus [[cite:PUB00076355]].</p> <p>Transportin-1 and -2 also function in nuclear import [[cite:PUB00090549]]. Transportin-1 was first identified as the import factor for the heterogeneous ribonucleoprotein A1 (hnRNP A1) [[cite:PUB00090550]].</p> <p>The subfamily of proteins known as RanBP6 (Ran-binding protein 6) are part of this family [[cite:PUB00152822]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein import into nucleus | The directed movement of a protein from the cytoplasm to the nucleus. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Importin subunit beta-1; TAIR: AT5G53480.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9FJD4|IMB1_ARATH Importin subunit beta-1; TrEMBL-Plants: tr|V7ASE2|V7ASE2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0289100 | 13 | ||
| – | Importin subunit beta-1; TAIR: AT5G53480.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9FJD4|IMB1_ARATH Importin subunit beta-1; TrEMBL-Plants: tr|V7ASE2|V7ASE2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0289100 | 13 | ||
| – | Importin-5; TAIR: AT5G19820.1 ARM repeat superfamily protein; Swiss-Prot: sp|O00410|IPO5_HUMAN Importin-5; TrEMBL-Plants: tr|A5XEM2|A5XEM2_MEDTR Importin beta-3, putative; Found in the gene: LotjaGi1g1v0643800 | 17 | ||
| – | Importin-5; TAIR: AT5G19820.1 ARM repeat superfamily protein; Swiss-Prot: sp|O00410|IPO5_HUMAN Importin-5; TrEMBL-Plants: tr|A5XEM2|A5XEM2_MEDTR Importin beta-3, putative; Found in the gene: LotjaGi4g1v0369200 | 11 | ||
| – | Importin-5; TAIR: AT5G19820.1 ARM repeat superfamily protein; Swiss-Prot: sp|O00410|IPO5_HUMAN Importin-5; TrEMBL-Plants: tr|I1KSC8|I1KSC8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0376600 | 17 | ||
| – | Importin-5; TAIR: AT5G19820.1 ARM repeat superfamily protein; Swiss-Prot: sp|O00410|IPO5_HUMAN Importin-5; TrEMBL-Plants: tr|A0A151TKV1|A0A151TKV1_CAJCA Importin-5; Found in the gene: LotjaGi4g1v0376600 | 14 | ||
| – | Importin-5; TAIR: AT5G19820.1 ARM repeat superfamily protein; Swiss-Prot: sp|O74476|IMB3_SCHPO Importin subunit beta-3; TrEMBL-Plants: tr|A0A151TKV1|A0A151TKV1_CAJCA Importin-5; Found in the gene: LotjaGi4g1v0376600 | 10 | ||
| – | Importin subunit beta-1; TAIR: AT5G53480.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9FJD4|IMB1_ARATH Importin subunit beta-1; TrEMBL-Plants: tr|I1KPN2|I1KPN2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437800 | 13 | ||
| – | Importin subunit beta-1; TAIR: AT5G53480.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9FJD4|IMB1_ARATH Importin subunit beta-1; TrEMBL-Plants: tr|I1KPN2|I1KPN2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437800 | 13 | ||
| – | Importin beta-1, putative; TAIR: AT2G16950.2 transportin 1; Swiss-Prot: sp|Q8H0U4|TNPO1_ARATH Transportin-1; TrEMBL-Plants: tr|A0A151TQB2|A0A151TQB2_CAJCA Transportin-1; Found in the gene: LotjaGi5g1v0350400 | 14 | ||
| – | Importin beta-1, putative; TAIR: AT2G16950.2 transportin 1; Swiss-Prot: sp|Q8H0U4|TNPO1_ARATH Transportin-1; TrEMBL-Plants: tr|A0A0B2RSI8|A0A0B2RSI8_GLYSO Transportin-1; Found in the gene: LotjaGi5g1v0350400 | 10 | ||
| – | Transportin-1; TAIR: AT2G16950.2 transportin 1; Swiss-Prot: sp|Q8H0U4|TNPO1_ARATH Transportin-1; TrEMBL-Plants: tr|A0A151TQB2|A0A151TQB2_CAJCA Transportin-1; Found in the gene: LotjaGi5g1v0350400 | 11 | ||
| – | Importin beta-1, putative; TAIR: AT2G16950.2 transportin 1; Swiss-Prot: sp|Q8H0U4|TNPO1_ARATH Transportin-1; TrEMBL-Plants: tr|A0A151TQB2|A0A151TQB2_CAJCA Transportin-1; Found in the gene: LotjaGi5g1v0350400 | 12 | ||
| – | Importin-like protein; TAIR: AT5G19820.1 ARM repeat superfamily protein; Swiss-Prot: sp|O74476|IMB3_SCHPO Importin subunit beta-3; TrEMBL-Plants: tr|G7J8P5|G7J8P5_MEDTR Importin beta-3, putative; Found in the gene: LotjaGi6g1v0053800 | 7 | ||
| – | Importin beta; TAIR: AT4G27640.1 ARM repeat superfamily protein; Swiss-Prot: sp|O60100|IMB4_SCHPO Probable importin subunit beta-4; TrEMBL-Plants: tr|K7M9M1|K7M9M1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0360700 | 13 | ||
| – | Importin beta; TAIR: AT4G27640.1 ARM repeat superfamily protein; Swiss-Prot: sp|O60100|IMB4_SCHPO Probable importin subunit beta-4; TrEMBL-Plants: tr|I3SK10|I3SK10_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0360700 | 7 | ||
| – | Importin beta; TAIR: AT4G27640.1 ARM repeat superfamily protein; Swiss-Prot: sp|O60100|IMB4_SCHPO Probable importin subunit beta-4; TrEMBL-Plants: tr|I3SK10|I3SK10_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0360700 | 7 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| SSF48371 | SUPERFAMILY | 1 | 5.88 |