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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2089750 |
| Transcript ID | Lj2g3v2089750.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | RecName: Full=Magnesium-chelatase subunit ChlD, chloroplastic; Short=Mg-chelatase subunit D; AltName: Full=Mg-protoporphyrin IX chelatase subunit ChlD; Flags: Precursorgi|2318117|gb|AAB72194.1| Mg-chelatase subunit D [Pisum sativum] gi|3913218|sp|O22437.1|CHLD_PEA |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 2 | 2 | – | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| Phobius | 3 | 11 | 9 | – | – | |
| Phobius | 12 | 23 | 12 | – | – | |
| Phobius | 24 | 608 | 585 | – | – | |
| PANTHER | 42 | 495 | 454 | 0 | – | |
| PANTHER | 42 | 495 | 454 | 0 | – | |
| Gene3D | 78 | 277 | 200 | 6.80E-48 | ||
| SUPERFAMILY | 78 | 395 | 318 | 3.31E-47 | ||
| CDD | 84 | 274 | 191 | 8.94E-06 | – | |
| TIGRFAM | 87 | 608 | 522 | 5.00E-202 | ||
| SMART | 101 | 282 | 182 | 3.50E-04 | ||
| Pfam | 197 | 264 | 68 | 3.00E-07 | ||
| Gene3D | 328 | 392 | 65 | 7.30E-09 | – | |
| MobiDBLite | 396 | 448 | 53 | – | – | |
| Coils | 414 | 448 | 35 | – | – | |
| PANTHER | 549 | 608 | 60 | 0 | – | |
| PANTHER | 549 | 608 | 60 | 0 | – | |
| Gene3D | 555 | 600 | 46 | 2.10E-04 | ||
| SUPERFAMILY | 555 | 607 | 53 | 1.21E-08 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Chlorophyll biosynthetic process | The chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors. | ||
| Molecular function | Magnesium chelatase activity | Catalysis of the reaction: ATP + H(2)O + Mg(2+) + protoporphyrin IX = ADP + 2 H(+) + magnesium protoporphyrin IX + phosphate. |
Expression pattern of Lj2g3v2089750.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2089750.1, powered by CORGI.
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