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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3085830 |
| Transcript ID | Lj3g3v3085830.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Protein disulfide isomerase L-2 [Medicago truncatula] gi|357472209|ref|XP_003606389.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 30 | 30 | – | – | |
| Phobius | 1 | 30 | 30 | – | – | |
| SignalP | 1 | 30 | 30 | – | – | |
| PANTHER | 1 | 36 | 36 | 9.90E-173 | – | |
| SignalP | 1 | 30 | 30 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| PANTHER | 1 | 36 | 36 | 9.90E-173 | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 7 | 22 | 16 | – | – | |
| Phobius | 23 | 30 | 8 | – | – | |
| Phobius | 31 | 557 | 527 | – | – | |
| MobiDBLite | 33 | 101 | 69 | – | – | |
| ProSiteProfiles | 85 | 210 | 126 | 15.95 | ||
| SUPERFAMILY | 100 | 210 | 111 | 4.07E-34 | ||
| Gene3D | 103 | 211 | 109 | 1.10E-36 | ||
| TIGRFAM | 105 | 556 | 452 | 2.40E-150 | ||
| PANTHER | 107 | 234 | 128 | 9.90E-173 | – | |
| PANTHER | 107 | 234 | 128 | 9.90E-173 | – | |
| Pfam | 107 | 207 | 101 | 5.00E-29 | ||
| CDD | 108 | 205 | 98 | 1.52E-38 | – | |
| TIGRFAM | 111 | 208 | 98 | 2.60E-33 | ||
| PRINTS | 125 | 133 | 9 | 6.30E-06 | – | |
| ProSitePatterns | 126 | 144 | 19 | – | ||
| PRINTS | 133 | 142 | 10 | 6.30E-06 | – | |
| PRINTS | 174 | 185 | 12 | 6.30E-06 | – | |
| SUPERFAMILY | 213 | 324 | 112 | 2.38E-14 | ||
| CDD | 213 | 312 | 100 | 1.32E-12 | – | |
| Gene3D | 216 | 324 | 109 | 3.10E-16 | ||
| Pfam | 248 | 419 | 172 | 2.40E-26 | – | |
| SUPERFAMILY | 312 | 442 | 131 | 4.78E-25 | ||
| CDD | 324 | 424 | 101 | 1.35E-13 | – | |
| PANTHER | 337 | 557 | 221 | 9.90E-173 | – | |
| PANTHER | 337 | 557 | 221 | 9.90E-173 | – | |
| Gene3D | 347 | 430 | 84 | 8.20E-09 | ||
| ProSiteProfiles | 423 | 552 | 130 | 12.733 | ||
| SUPERFAMILY | 441 | 551 | 111 | 7.97E-28 | ||
| Gene3D | 441 | 552 | 112 | 2.90E-30 | ||
| CDD | 445 | 547 | 103 | 4.13E-49 | – | |
| Pfam | 445 | 530 | 86 | 1.40E-21 | ||
| ProSitePatterns | 465 | 483 | 19 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein disulfide isomerase activity | Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins. | ||
| Biological process | Cell redox homeostasis | Any process that maintains the redox environment of a cell or compartment within a cell. |
Expression pattern of Lj3g3v3085830.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3085830.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.