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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0024800 |
Transcript ID | LotjaGi1g1v0024800.4 |
Related isoforms 5 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | EH domain-containing protein 1; TAIR: AT3G20290.1 EPS15 homology domain 1; Swiss-Prot: sp|Q94CF0|EHD1_ARATH EH domain-containing protein 1; TrEMBL-Plants: tr|A0A1J7HUL5|A0A1J7HUL5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0024800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:2962869..2968265) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGTTCGACCCGATCCCGTTCGGTTCGTGCTCCAAAGAGTACCAGTCAATCTACCAGGACTGGTTCAATTTTGCTGA TTCAGGTAACTTGCTCTTCTCCATTGAGATTCCAATGGTTTTTTTGGAACGATTGTGTCACTGTGCATGGTTTTTTTTCA GATAACGATGGTCGCATTACTGGGAATGATGCCACCAAGTTTTTCGCCATGTCCAACTTGTCTCGCCAAGATCTTAAGCA GGTTTCTTTATTATCATTACTGTTGTTGTTACCATGATCATTGCTTTGGAGTGATGAGAAAACGATTAATATAGACGGGG ATTGTGAATTTGTTTCTGATGGTTCAGCATTTGTGGGATAATTACCTTGTATGACTAGTGTCTTAGTAACTAGTAAGTGG GTTGGGAAGAGTGAGTTGAGAATGGAGGGAGTTTGAAACTGGGGGTGCATGAATGATCAAAGATTTGGTTGTTTGGTACT TTGGTTAGGGAATAAAGAGGAAAGTAATGAAAATTGGTCATTAACACATTATTGGCATGCCCTGCTTAATTTTGGTATGT TTTCCTCATGAAGAAATGAAGTGAGGTGATATTGAAGTTGACTTGCAAATTGCAATGCAAAGAGAAATGACTGAGATGAT AATGTGGTTTAATAAGTGTTTGAATTTGTTTTCTCCGCGGATATGTTGTATTTGTGTTCATCGGTTATTTCACTCCAAAC AATAAATAACAGTATGTTGCTGATTTTCAAATTTTATCACTTTTTTACCTTTTCCTTCTAGCATGCACTGGTGAACTTTG AACTTCCTGTCATTCGTATCTTAAATTTCTCTCCATTTTTGCTTTGCTAACTTGGTCTTGAATCGGGTTGAACTTTGATT TGTGGAAATGCCTCATAGGTTATTCAGCAGCTGCATTTTTTTATTCTTTGCAAGCAAGATTTAAATCTAATCCATTATTG CTATAGTTTTACATTGTCACTTGTCAGTGAGGCAGTGTCAACTTTGCTGTCAGTGGGCCATAGTGCCAACTATTTAAAAT AACTTTTAAACTCTATTTTGCAAGTGACATATTTTAATTCCTCCTATGGTGTGGCACTTAACTGTTTTATGGTAATATTT GATCTTAGACTGGTAGTGGATTCAATTTGAACTCTTACACTTGACTCAAGTTGAAGTTGGCTTTGATTTAATTTGATCTC CATCAATTGGAATGGTTTGGGCATTTGATGATTGAGTTGTTTATATAAGTTGTACTTATACCCTTTGACTTATTCCTTTA ACTAAATTGTTTCTTTGTTTATTACTATTACCAAAACAAGGTGTGGGCTATTGCAGATTCAAGACGACAAGGATATCTTG GTTTCCAAGAGTTTATAATTGCTATGCAGGTACAAATATATTATCCTTTATTGGCGTTTAATGCTAACAAATTTCCAGAA TCTTACACATTTGAAATGTAGGTAGTTTCTTTGGCACAATCTGGGCACCCTGTAACACATGATCTGCTGAGTAGTGATGG TAAGTTATGTATGTTTAGGTTTGTCTTTATTGTTTTGTTCAAATAACTTTCTATAATTGTATTAATATGTTTTGAAATTC ACATTCTTGGTGCTGTCTACATTTGTGGACTGTGAATTTCTATCATATAAGATTTATCTAATGAAAGCTTAACTTTTATT TCAGTTGATTTGAAAAATCTGAAACCTCCCACAATGGAGGGTTTGGATGCATTACTAGCTGTAAGTATTTCTTTTTAATG TTTTTTATTTACGGTGCTAATATTTTTATGTTTATTTAATGAAAGTGCTTACTTGGCTGTGTTTATCCAGAAGAAAAAGC ATAAACAAAAAGATGTAGATGTAAATGGTAATTTATTTCTTATTTTAGTGAATACGGGCATTCTTATTGATTTTGTTTCT CTCTTCAAAATCCAAGTTCAATAATCAACAAAAATGCAGGTAGTTCTCAATTGCAGCCATCACCATCAAGTAATTGGTTT TCTTCGAAGTCAACCAAAAAGGCAAGCATTCTTTTACTGTGTCTTTGATATTTCTCTGTGCATTATTTCTGCTAGAGAGC ATACTGAATGTTCATTTCAAATTTTCATCTAATGTCAGGCTTGGGTCATTCTTTACCTGCTTTATTATGTTCTATTTCAT TTTGTTTCATCACGGTCTTGAATAGTATCCCTGGGAGGTTTTGGTTTAGTTACTCTATCTCTTTTCTTCTTTTATAAGAT GACGATACAAATAATGTTTAGCCAGTTATTAGGGCCTGAAACCAACATTATCTTTTGACTTGTATGTAACTTGTAAGTGT CTAAGTGAAATAGACCTAAGAGTGTGCTTGTCTGCCTGATACTCCACAACAAAATATGAATATTTCAGTTTTGAACTGTT ATCAAATTTGTTCTTTTTGGACTAACAAAATATGCATTTTTATCTTGTATCTATCTAATTTACTTATTGATAGTACATAA ATCAAGTTGGCAGCAGCACCCTAAAGTCTCTTCTGTATATATGTTATCTAAGCCTTTTTATCTGCGTGCATTGCTGCTTC TTTGCAATTTCCTGTACTTAAAACTTGTCCAATACATTCTAATAGGGTTTTCACTTGAACTTTTGGCGCATATTTCCACA GGTTCCCCTTTCCTCCGTGACATCAATAATTGACGGCTTGAAGAGACTCTACATTCAGAAATTGAAGCCATTAGAAGTTA CTTACCGTTTTAATGATTTTGTATCCCCATTATTGGTCAGTAAGTGACCTTGTTCAGAAATAACTATCTACTCTAGATTT CATATTTTTTCTTTCTTCAGCTCTTCAGCCATGTTACTTTTTTTTAATATCGACAAAGATATATAGTTGGGTCTTTAGTT GATTGCAACTCTTTATATATTGCAGACAAATAGTGATTTTGATGCCAAACCAATGGTTATGCTTTTGGGTCAGTACTCAA CCGGTAAAACAACATTTATCAAACATCTGCTTAAAAGTAGTTATCCAGGCAAGTAATTATCCTTTCTCTATATCCTTTGT GTGCATATGTTTGGCACTGCTTATAAGTGTATTATAAATATTTGTTTCTGACTTCTTTTTCATAACTGTCTATAGGAGCA CATATTGGACCTGAGCCTACAACTGATAGGTTTGTTGTTGTTATGGTATGTGCCAGCCGAACCAATTTATCTCCCACGAC TCTCTAATACATTGAAAATTTTCTTGATTTTAAATTTCTAAATTGGGACTTCAAACTCCTAGCAAGCTTCAACATCTTCA TGGAAGTGCTAGAATTTCTCAATGCACTTAGTAGTTTATCCTGTAGCATTAGTGCCAAGTTTAGACAATTTGAATTCTTG GAGCTTTTTCAATAGATCTATTACTCTATCTTGTAGTCTTCTTGGAAAATGAGTTATTGCATCAGTTTTAACTAGCAAAT GGTACTGCTGTACAGTCTGGACCTGATGAGAGAAGTGTTCCTGGAAATACTGTTGCTGTCCAAGCAGACATGCCATTTAG TGGTCTTACAACTTTTGGCACAGCCTTTTTGTCAAAGTTTGAGTGTTCACAAATGCCTCATCCTGTAAGTTGCTCAAGAG CCATTGAAAAAGTTCACAAGATTCTCCTTTTGTAGCATTTGTACTTAACTATTTTTTATTCGTCCAAAGCTACTGGAGCA CATTACATTTGTGGACAGTCCTGGAGTTCTATCTGGAGAAAAGCAACGGACACAAAGAGCATATGACTTTACGGGTGTAA CGTCTTGGTTTGCTTCTAAGTGTGATTTGATACTCCTTCTCTTTGATCCTCACAAACTTGATATCAGTGATGAGTTCAAT CGTGTGATATCATCCTTACGGGGGCATGATGATAAAATTCGAGTGGTTTTGAACAAGGCAGACCAAGTTGATACTCAACA AGTAAGAGCTTGTGTAGTTAAACTTCTATTTGTTTATTTAATGTGGTCAGGGTAAACATAACCTATATTTGGCCCCATTT TGCAGCTGATGAGGGTTTATGGAGCTTTAATGTGGTCACTTGGGAAGGTGCTGAATACACCTGAAGTCAGTCGTGTGTAT ATTGGGTATGTCACTTCATGTATGCACTCCTCTGTCAATGTTTACGTGTTTGTTTTTGACATAGAGAATTCGACAGAGAC TACTTTGTTTCTACATTCCTAAGTTTTAGGAGTTTCTCTTTATGTTTTAGGGTGGAAGACTTTTTTACTCCTTTTACTAT GTTTTATTCAATTTAGATGTAATGTAACTGTCTTTCTTTTCCTTATGTATGGGGTTACCATGTGCTTTTTTGAGCTCATT TAACTTTCTCTTGGCAGCTCCTTCAACGACAAACCTGTAAATGATGCTGTCAGTGGTCCAATTGGTAAGGAACTCTTTGA AAAAGAACAGGAAGACCTTCTTTCAGATCTGAAAGATATACCAAAAGCCGCTTGTGATCGAAGAGTGAGTTTATGCATTT AAATGTATTTCGCTTATCATAATAAATTAATAATAGTTCACTAAAATGAGATTACGTATACTTTCATGTTGATGTTAAAA AGTAAATTATGTCCATGTTTGGTTTCATTATCTAGTTAAGTGCTAGTTAAGATTGATGTGATGAAATTACAAGGATGTCA GTCTTTCAATTTGGTTGTTTTTCTTTTTTTGTGGAAATAAAAGAAAATAATGGCCATGTTTGGTTTCATTATCTAGTTAG TGCTGGTTATATGTTTATTTAATTAAGAATTTGCTTCTTTTCATAGTTATATCATTTGTACACATTGGCTATTGTAGATC AATGAATTTGTAAAACGAGCACGAGCAGCCAAGATTCACGCTTACATTATCAGTCATCTTAAAAAGGAGATGCCTGCAAT GATGGGCAAAGCTAAAGCACAGCAAAAGCTCATTGATAATTTGGCAGGTGAATTTGGAAAGGTACCATTCCAACCCTTTT ACCCTTCCCTGGACTCTTCCACTGGGGAGCTTTATAACATCAATTTAGTCTACAGTTGAAGCTAAAGACAAATTCAATTC TGGTGATCATTTCTTCACAGACCTAATTATTTGAAATGAGAAGCGAATTCAAACATTCTATTATTAGTCTATTACTTTTT ATGAATCTGACTGTATATCCTTTCTGCTGACCTGCACGTCTCTTTGGATAACACTTAAAATGCATGTACTTGACCATTAA CTTTGAAACAGGTACAAAGAGAGTTCCATTTGCCTCCTGGTGACTTCCCAAATCTGGAGCATTTCAGGGAGGTCTTGGGT GGTTACAATTTTGACAAGTTTGAGAAATTGAAACCAAAAATGGTACAAGCAGTTGATGACATGCTAGCTTACGACATTCC TAACCTCTTGAAGAACTTCAGGAATCCCTATGACTAA
CDS sequence (LotjaGi1g1v0024800.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTTCGACCCGATCCCGTTCGGTTCGTGCTCCAAAGAGTACCAGTCAATCTACCAGGACTGGTTCAATTTTGCTGA TTCAGATAACGATGGTCGCATTACTGGGAATGATGCCACCAAGTTTTTCGCCATGTCCAACTTGTCTCGCCAAGATCTTA AGCAGGTGTGGGCTATTGCAGATTCAAGACGACAAGGATATCTTGGTTTCCAAGAGTTTATAATTGCTATGCAGGTAGTT TCTTTGGCACAATCTGGGCACCCTGTAACACATGATCTGCTGAGTAGTGATGTTGATTTGAAAAATCTGAAACCTCCCAC AATGGAGGGTTTGGATGCATTACTAGCTAAGAAAAAGCATAAACAAAAAGATGTAGATGTAAATGTAATCAACAAAAATG CAGGTAGTTCTCAATTGCAGCCATCACCATCAAGTAATTGGTTTTCTTCGAAGTCAACCAAAAAGGTTCCCCTTTCCTCC GTGACATCAATAATTGACGGCTTGAAGAGACTCTACATTCAGAAATTGAAGCCATTAGAAGTTACTTACCGTTTTAATGA TTTTGTATCCCCATTATTGACAAATAGTGATTTTGATGCCAAACCAATGGTTATGCTTTTGGGTCAGTACTCAACCGGAG CACATATTGGACCTGAGCCTACAACTGATAGGTTTGTTGTTGTTATGTCTGGACCTGATGAGAGAAGTGTTCCTGGAAAT ACTGTTGCTGTCCAAGCAGACATGCCATTTAGTGGTCTTACAACTTTTGGCACAGCCTTTTTGTCAAAGTTTGAGTGTTC ACAAATGCCTCATCCTCTACTGGAGCACATTACATTTGTGGACAGTCCTGGAGTTCTATCTGGAGAAAAGCAACGGACAC AAAGAGCATATGACTTTACGGGTGTAACGTCTTGGTTTGCTTCTAAGTGTGATTTGATACTCCTTCTCTTTGATCCTCAC AAACTTGATATCAGTGATGAGTTCAATCGTGTGATATCATCCTTACGGGGGCATGATGATAAAATTCGAGTGGTTTTGAA CAAGGCAGACCAAGTTGATACTCAACAACTGATGAGGGTTTATGGAGCTTTAATGTGGTCACTTGGGAAGGTGCTGAATA CACCTGAAGTCAGTCGTGTGTATATTGGCTCCTTCAACGACAAACCTGTAAATGATGCTGTCAGTGGTCCAATTGGTAAG GAACTCTTTGAAAAAGAACAGGAAGACCTTCTTTCAGATCTGAAAGATATACCAAAAGCCGCTTGTGATCGAAGAATCAA TGAATTTGTAAAACGAGCACGAGCAGCCAAGATTCACGCTTACATTATCAGTCATCTTAAAAAGGAGATGCCTGCAATGA TGGGCAAAGCTAAAGCACAGCAAAAGCTCATTGATAATTTGGCAGGTGAATTTGGAAAGGTACAAAGAGAGTTCCATTTG CCTCCTGGTGACTTCCCAAATCTGGAGCATTTCAGGGAGGTCTTGGGTGGTTACAATTTTGACAAGTTTGAGAAATTGAA ACCAAAAATGGTACAAGCAGTTGATGACATGCTAGCTTACGACATTCCTAACCTCTTGAAGAACTTCAGGAATCCCTATG ACTAA
Protein sequence (LotjaGi1g1v0024800.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEFDPIPFGSCSKEYQSIYQDWFNFADSDNDGRITGNDATKFFAMSNLSRQDLKQVWAIADSRRQGYLGFQEFIIAMQVV SLAQSGHPVTHDLLSSDVDLKNLKPPTMEGLDALLAKKKHKQKDVDVNVINKNAGSSQLQPSPSSNWFSSKSTKKVPLSS VTSIIDGLKRLYIQKLKPLEVTYRFNDFVSPLLTNSDFDAKPMVMLLGQYSTGAHIGPEPTTDRFVVVMSGPDERSVPGN TVAVQADMPFSGLTTFGTAFLSKFECSQMPHPLLEHITFVDSPGVLSGEKQRTQRAYDFTGVTSWFASKCDLILLLFDPH KLDISDEFNRVISSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFNDKPVNDAVSGPIGK ELFEKEQEDLLSDLKDIPKAACDRRINEFVKRARAAKIHAYIISHLKKEMPAMMGKAKAQQKLIDNLAGEFGKVQREFHL PPGDFPNLEHFREVLGGYNFDKFEKLKPKMVQAVDDMLAYDIPNLLKNFRNPYD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 11 | 108 | 98 | 8.4E-25 | – | |
SUPERFAMILY | 11 | 89 | 79 | 1.55E-20 | ||
SMART | 12 | 103 | 92 | 1.6E-10 | ||
ProSiteProfiles | 14 | 38 | 25 | 5.168 | ||
ProSiteProfiles | 15 | 93 | 79 | 12.828 | ||
CDD | 19 | 85 | 67 | 5.63029E-22 | ||
Pfam | 21 | 80 | 60 | 9.0E-8 | ||
ProSiteProfiles | 48 | 83 | 36 | 9.576 | ||
PANTHER | 108 | 534 | 427 | 1.7E-265 | – | |
PANTHER | 108 | 534 | 427 | 1.7E-265 | – | |
Pfam | 167 | 199 | 33 | 2.9E-15 | ||
Gene3D | 167 | 518 | 352 | 5.0E-138 | – | |
ProSiteProfiles | 183 | 419 | 237 | 18.661 | ||
SUPERFAMILY | 194 | 456 | 263 | 9.22E-23 | ||
CDD | 203 | 432 | 230 | 8.70604E-133 | – | |
Gene3D | 204 | 417 | 214 | 5.0E-138 | – | |
Pfam | 424 | 526 | 103 | 3.2E-37 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi1g1v0024800.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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