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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0224700 |
| Transcript ID | LotjaGi1g1v0224700.6 |
| Related isoforms 11 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutamate synthase, putative; TAIR: AT5G53460.1 NADH-dependent glutamate synthase 1; Swiss-Prot: sp|Q03460|GLSN_MEDSA Glutamate synthase [NADH], amyloplastic; TrEMBL-Plants: tr|Q93WZ7|Q93WZ7_PHAVU NADH glutamate synthase; Found in the gene: LotjaGi1g1v0224700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:51351967..51355909) extracted from Lotus japonicus Gifu genome v1.2.
ATGATGCGGAAGTGCCACAAGAACACCTGTCCTGTTGGCATTGCTACCCAAGATCCAGTACTTAGGGAGAAGTTTGCTGG AGAACCTGAGCATGTTATTAATTTCTTTTTTATGGTGGCTGAAGAGATGAGAGAAATAATGGCCCAGCTTGGGTTTAGAA CAGTTAATGAGATGGTTGGCCATTCTGATATGCTTGAAGTTGATAAAGAAGTTGTTAAAAGCAATGAGAAACTAGAGAAC ATTGACCTCTCCCTATTGCTTAGACCTGCAGCTGAACTGCGGCCAGAAGCCGCTCAATACTGTGTGCAAAAGCAAGATCA CAGTTTGGACATGGCCTTGGATAATCAGCTCATAAGTTTGTCAAGTGCTGCTTTGGAGAAGGGTCTCCCAGTATACATTG AAACACCAATCTATAACGTAAACCGTGCTGTGGGAACTATGCTTAGCCATGAGGTGACCAAGAGGTACCACTTAGCTGGT CTTCCAACTGACACCATCCACATCAAATTTAATGGTAGCGCGGGCCAGAGCTTTGGTGCATTCCTCTGTCCTGGTATTAC TTTGGAACTAGAAGGTGATAGCAATGACTATGTTGGTAAAGGATTGTCCGGTGGAAAGGTTGTAGTATATCCGCCAAAAG GAAGCAATTTTGACCCTAAGGAGAACATTGTGATTGGCAATGTGGCACTGTATGGGGCAACACGTGGTGAAGCATATTTC AACGGGATGGCAGCAGAAAGATTTTGTGTGCGGAATTCTGGGGCTAAGGCTGTTGTGGAAGGTGTTGGTGATCATGGATG TGAGTACATGACTGGCGGGACTGTTGTTGTGCTTGGGAAAACTGGTAGAAATTTTGCTGCTGGTATGAGTGGCGGGATTG CTTATGTTCTTAATGCGGATGGAAAATTCCAATCTCGATGCAACCTGGAGCTCGTAGATCTGGATAAGGTTGAAGAGGAG GAGGACATTGTTACTCTCAAAATGTTGATACAGCAACATCAACGACACACAAATAGTCTGCTTGCCAAAGAAGTGCTTGA TAATTTTGGGAATCTTCTTCCTAAATTTGTCAAGGTGATCCCGAGGGAGTATAAACGTGTTCTTGCAAGTATGAAGTCTG AGGAAGCCTCCAAAGATGCAGTGGAGCGCACTGCTAAAGATGCAGAAGAAGAAGATGATGAAGCACAAGCAGTGGAGAAA GATGCTTTTGAGGAGCTTAAGAAATTGGCAACTGCATCATTGAAAGAGAAACAGAGTGAGGTAATTTTTATTCTTTTACT TGTACGTTTGATGTTCTGTTTACTTGTTTGATGTTCTGTTTTCTTAATGCTTATACGATAGGAACATGCATTGAAGATTT AAGTGAAGTAACTTGAGAAATTTAAGTAAATTTTGACCTGGCTATGTGTGAATATCTGCAGGCTGAATCACCCAAGAGGC CAAGTCAAGTAACTGAAGCCATTAAACATAGAGGTTTCGTGGCTTATGAGCGTGAGGGTGTTCAGTATAGGGATCCGAAT GTGCGCATGAACGATTGGAAGGAAGTGATGGAGGAGACAAAGCCTGGTCCACTTCTGAAAACACAGTCAGCCCGTTGCAT GGACTGTGGAACTCCTTTTTGTCATCAGGTCTGCATTACCCGCATCCAAGTTTTCATTTTTAGCTTAGAACATGCATCTT TCCTTCTGATGTTATTAGTACCCTTGTCTAAGCTAATGATATTTGCAACAAATTTCAGGAAAATTCTGGATGTCCCCTAG GAAATAAAATACCAGAATTCAATGAGTTAGTGTACCAAAATAGGTGGCGCGAAGCATTAGATAGGCTTCTTGAAACAAAC AACTTTCCAGAGTTTACTGGTCGGGTGTGCCCAGCTCCTTGTGAAGGTTCCTGTGTCCTTGGTATTATTGAGAATCCTGT ATCTATTAAAAGCATTGAATGTGCAATCATAGACAAGGCTTTTGAGGAGGGTTGGATGGTGCCACGACCTCCAGCCAAAA GAACAGGGTATGCTATTTTATTTCTTATGAACATCTTGCTAGTTTCTCCTAGAACTTGGATGTATTATATAAAACAATTC ATGTGTCCTCGTGGATGACATGGTTTCAGAGTCTCTTTAACCAAGTAGATGAACAGTGTTATCAATTAATATATATCTTT ACTAATGCAGGAAAAGAGTAGCTGTCGTTGGAAGTGGACCAGCTGGCTTGGCAGCTGCTGATCAGCTGAACAAAATGGGT CACACAGTAACAGTATTTGAAAGAGCGGATCGGATTGGAGGGCTTATGATGTATGGGGTTCCCAACATGAAAACTGACAA AGTGAATATAGTTCAAAGGCGAGTCAATCTTATGGCTGAGGAAGGAATAGATTTTGTGGTAAATGCTAATGTTGGACTCG ATCCTATATATTCTCTTGATCGGCTTCGAGAGGAAAATGATGCAATTGTGTTGTCTGTAGGAGCCACAAAACCAAGGTGA GACCCATAGACATGTTGATTAGTTCAATTTCTTTCTGCAACAATAAAAAGAAATGATAATTAGAAGGAAAGATGCTTAAA ATGAAGGTATTTTTTCATGCAGGGATCTTCCAGTACCTGGAAGGGAGCTGTCAGGAGTTCATTTTGCAATGGAGTTTCTC CATGCAAATACTAAAAGCTTGCTTGATAGCAATCTCCAGGATGGCAACTATATTTCTGCCAAGGGCAAGAAAGTTGTTGT CATTGGTGGGGGTGACACTGGCACTGATTGCATAGGAACATCCATTCGCCACGGATGTAGCAACATTGTAAATCTTGAAC TTCTCCCTCAGCCGCCACAAACTAGGGCTCCAGGCAACCCATGGCCCCAGGTTAGATTTGAATCATTGGTTTTAAAAATG CCTAGTTATGTATCTTCTTTGCAATGGGCCTGTCATTACTAGCAATGGCAAAATAAGTATCAAACATTTTTTACTCATAG TATTTGGATTATGACTGAGTTTAACTACTGATTTTTCCGGGATGATGCAGTGGCCTCGTGTATTCCGTGTTGATTACGGG CACCAAGAAGCTGCAGCTAAGTTTGGCAATGATCCAAGAACTTATGAGGTATTGACTAAGCGGTTTGTGGGAGATGAGAA TGGAGCTGTGAAAGGGCTTGAAGTGGTACATGTTCGCTGGGAGAAGGATGAAATGGGAAAGTTTCAGTTTAAGGAAATTG AGGGCAGTGAGGAGATTATTGAGGCTGACCTAGTTTTCCTTGCCATGGGATTCCTAGGCCCTGAGTCTGTAAGTATTCTT ATTAGCTTCATTTCTTATGTTAAAAGGCCAAAAAGTATGTAGTCTCAATTTTTATGTTGTCTCATGTTAGTTCTCCACTT GTGCTTTTTTATTACTTTTTTAGGTTTTATAAATGTAATGGACAATAGGTTATTTTATGAACATATTTAAATTTTAATGG ACTGAACTTTCAATTGTTTGTTAGATGAAATACAAACAGAAAAATGGGTTGTTGCTGTTACAGTGCTTGTAATTAAACTT TATAGTAATGAATTTCAGTGTGCGGAACACTTGAACTCGATAGTAATCTTCTACCAATACCAAATTCCGATTGATAACAC ATGATCCTCATAGCCATAACTGATAATGCTTTGGTTTCTTCTGCCTTACCAGACAATTGCAGAGAAGTTGGGTGTGGAGC GAGACAACAGGTCAAACTTCAAGGCTGATTACGGTCGCTTCTCAACCAGTGTCAATGGTGTGTTTGCCGCTGGAGACTGT CGCCGGGGTCAGTCCCTTGTGGTGTGGGCTATTTCAGAGGGACGGCAAGCTGCAGCACAAGTTGACAACTATCTCACCAA AGAGGACCGAGAGCACGGTATTGATGCGGAGCATGTCAAGAGGCAAGAGGGCCTCAATAAGAAGCACCAAGGCAGCAGCG GCAAACACACAGTGATGACTTAG
CDS sequence (LotjaGi1g1v0224700.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGCGGAAGTGCCACAAGAACACCTGTCCTGTTGGCATTGCTACCCAAGATCCAGTACTTAGGGAGAAGTTTGCTGG AGAACCTGAGCATGTTATTAATTTCTTTTTTATGGTGGCTGAAGAGATGAGAGAAATAATGGCCCAGCTTGGGTTTAGAA CAGTTAATGAGATGGTTGGCCATTCTGATATGCTTGAAGTTGATAAAGAAGTTGTTAAAAGCAATGAGAAACTAGAGAAC ATTGACCTCTCCCTATTGCTTAGACCTGCAGCTGAACTGCGGCCAGAAGCCGCTCAATACTGTGTGCAAAAGCAAGATCA CAGTTTGGACATGGCCTTGGATAATCAGCTCATAAGTTTGTCAAGTGCTGCTTTGGAGAAGGGTCTCCCAGTATACATTG AAACACCAATCTATAACGTAAACCGTGCTGTGGGAACTATGCTTAGCCATGAGGTGACCAAGAGGTACCACTTAGCTGGT CTTCCAACTGACACCATCCACATCAAATTTAATGGTAGCGCGGGCCAGAGCTTTGGTGCATTCCTCTGTCCTGGTATTAC TTTGGAACTAGAAGGTGATAGCAATGACTATGTTGGTAAAGGATTGTCCGGTGGAAAGGTTGTAGTATATCCGCCAAAAG GAAGCAATTTTGACCCTAAGGAGAACATTGTGATTGGCAATGTGGCACTGTATGGGGCAACACGTGGTGAAGCATATTTC AACGGGATGGCAGCAGAAAGATTTTGTGTGCGGAATTCTGGGGCTAAGGCTGTTGTGGAAGGTGTTGGTGATCATGGATG TGAGTACATGACTGGCGGGACTGTTGTTGTGCTTGGGAAAACTGGTAGAAATTTTGCTGCTGGTATGAGTGGCGGGATTG CTTATGTTCTTAATGCGGATGGAAAATTCCAATCTCGATGCAACCTGGAGCTCGTAGATCTGGATAAGGTTGAAGAGGAG GAGGACATTGTTACTCTCAAAATGTTGATACAGCAACATCAACGACACACAAATAGTCTGCTTGCCAAAGAAGTGCTTGA TAATTTTGGGAATCTTCTTCCTAAATTTGTCAAGGTGATCCCGAGGGAGTATAAACGTGTTCTTGCAAGTATGAAGTCTG AGGAAGCCTCCAAAGATGCAGTGGAGCGCACTGCTAAAGATGCAGAAGAAGAAGATGATGAAGCACAAGCAGTGGAGAAA GATGCTTTTGAGGAGCTTAAGAAATTGGCAACTGCATCATTGAAAGAGAAACAGAGTGAGGCTGAATCACCCAAGAGGCC AAGTCAAGTAACTGAAGCCATTAAACATAGAGGTTTCGTGGCTTATGAGCGTGAGGGTGTTCAGTATAGGGATCCGAATG TGCGCATGAACGATTGGAAGGAAGAAAATTCTGGATGTCCCCTAGGAAATAAAATACCAGAATTCAATGAGTTAGTGTAC CAAAATAGGTGGCGCGAAGCATTAGATAGGCTTCTTGAAACAAACAACTTTCCAGAGTTTACTGGTCGGGTGTGCCCAGC TCCTTGTGAAGGTTCCTGTGTCCTTGGTATTATTGAGAATCCTGTATCTATTAAAAGCATTGAATGTGCAATCATAGACA AGGCTTTTGAGGAGGGTTGGATGGTGCCACGACCTCCAGCCAAAAGAACAGGGAAAAGAGTAGCTGTCGTTGGAAGTGGA CCAGCTGGCTTGGCAGCTGCTGATCAGCTGAACAAAATGGGTCACACAGTAACAGTATTTGAAAGAGCGGATCGGATTGG AGGGCTTATGATGTATGGGGTTCCCAACATGAAAACTGACAAAGTGAATATAGTTCAAAGGCGAGTCAATCTTATGGCTG AGGAAGGAATAGATTTTGTGGTAAATGCTAATGTTGGACTCGATCCTATATATTCTCTTGATCGGCTTCGAGAGGAAAAT GATGCAATTGTGTTGTCTGTAGGAGCCACAAAACCAAGGGATCTTCCAGTACCTGGAAGGGAGCTGTCAGGAGTTCATTT TGCAATGGAGTTTCTCCATGCAAATACTAAAAGCTTGCTTGATAGCAATCTCCAGGATGGCAACTATATTTCTGCCAAGG GCAAGAAAGTTGTTGTCATTGGTGGGGGTGACACTGGCACTGATTGCATAGGAACATCCATTCGCCACGGATGTAGCAAC ATTGTAAATCTTGAACTTCTCCCTCAGCCGCCACAAACTAGGGCTCCAGGCAACCCATGGCCCCAGTGGCCTCGTGTATT CCGTGTTGATTACGGGCACCAAGAAGCTGCAGCTAAGTTTGGCAATGATCCAAGAACTTATGAGGTATTGACTAAGCGGT TTGTGGGAGATGAGAATGGAGCTGTGAAAGGGCTTGAAGTGGTACATGTTCGCTGGGAGAAGGATGAAATGGGAAAGTTT CAGTTTAAGGAAATTGAGGGCAGTGAGGAGATTATTGAGGCTGACCTAGTTTTCCTTGCCATGGGATTCCTAGGCCCTGA GTCTACAATTGCAGAGAAGTTGGGTGTGGAGCGAGACAACAGGTCAAACTTCAAGGCTGATTACGGTCGCTTCTCAACCA GTGTCAATGGTGTGTTTGCCGCTGGAGACTGTCGCCGGGGTCAGTCCCTTGTGGTGTGGGCTATTTCAGAGGGACGGCAA GCTGCAGCACAAGTTGACAACTATCTCACCAAAGAGGACCGAGAGCACGGTATTGATGCGGAGCATGTCAAGAGGCAAGA GGGCCTCAATAAGAAGCACCAAGGCAGCAGCGGCAAACACACAGTGATGACTTAG
Protein sequence (LotjaGi1g1v0224700.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMVAEEMREIMAQLGFRTVNEMVGHSDMLEVDKEVVKSNEKLEN IDLSLLLRPAAELRPEAAQYCVQKQDHSLDMALDNQLISLSSAALEKGLPVYIETPIYNVNRAVGTMLSHEVTKRYHLAG LPTDTIHIKFNGSAGQSFGAFLCPGITLELEGDSNDYVGKGLSGGKVVVYPPKGSNFDPKENIVIGNVALYGATRGEAYF NGMAAERFCVRNSGAKAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAYVLNADGKFQSRCNLELVDLDKVEEE EDIVTLKMLIQQHQRHTNSLLAKEVLDNFGNLLPKFVKVIPREYKRVLASMKSEEASKDAVERTAKDAEEEDDEAQAVEK DAFEELKKLATASLKEKQSEAESPKRPSQVTEAIKHRGFVAYEREGVQYRDPNVRMNDWKEENSGCPLGNKIPEFNELVY QNRWREALDRLLETNNFPEFTGRVCPAPCEGSCVLGIIENPVSIKSIECAIIDKAFEEGWMVPRPPAKRTGKRVAVVGSG PAGLAAADQLNKMGHTVTVFERADRIGGLMMYGVPNMKTDKVNIVQRRVNLMAEEGIDFVVNANVGLDPIYSLDRLREEN DAIVLSVGATKPRDLPVPGRELSGVHFAMEFLHANTKSLLDSNLQDGNYISAKGKKVVVIGGGDTGTDCIGTSIRHGCSN IVNLELLPQPPQTRAPGNPWPQWPRVFRVDYGHQEAAAKFGNDPRTYEVLTKRFVGDENGAVKGLEVVHVRWEKDEMGKF QFKEIEGSEEIIEADLVFLAMGFLGPESTIAEKLGVERDNRSNFKADYGRFSTSVNGVFAAGDCRRGQSLVVWAISEGRQ AAAQVDNYLTKEDREHGIDAEHVKRQEGLNKKHQGSSGKHTVMT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 99 | 99 | 3.66E-22 | – | |
| Gene3D | 1 | 107 | 107 | 2.5E-33 | ||
| PANTHER | 1 | 461 | 461 | 0.0 | – | |
| Pfam | 1 | 53 | 53 | 2.0E-16 | ||
| PANTHER | 1 | 461 | 461 | 0.0 | – | |
| SUPERFAMILY | 105 | 369 | 265 | 1.24E-100 | ||
| Gene3D | 108 | 381 | 274 | 2.3E-116 | ||
| CDD | 113 | 362 | 250 | 4.45117E-158 | ||
| Pfam | 136 | 322 | 187 | 2.0E-87 | ||
| Coils | 371 | 401 | 31 | - | – | |
| MobiDBLite | 375 | 397 | 23 | - | – | |
| SUPERFAMILY | 433 | 562 | 130 | 5.13E-28 | ||
| Gene3D | 460 | 551 | 92 | 3.0E-16 | ||
| Pfam | 463 | 539 | 77 | 1.1E-15 | ||
| TIGRFAM | 463 | 891 | 429 | 1.3E-207 | ||
| PANTHER | 464 | 897 | 434 | 0.0 | – | |
| PANTHER | 464 | 897 | 434 | 0.0 | – | |
| SUPERFAMILY | 549 | 889 | 341 | 2.59E-62 | ||
| Pfam | 552 | 878 | 327 | 8.8E-26 | ||
| Gene3D | 552 | 685 | 134 | 2.8E-29 | ||
| PRINTS | 553 | 575 | 23 | 1.2E-25 | – | |
| PRINTS | 576 | 589 | 14 | 1.2E-25 | – | |
| PRINTS | 619 | 629 | 11 | 1.2E-25 | – | |
| Gene3D | 691 | 911 | 221 | 2.7E-17 | ||
| PRINTS | 697 | 711 | 15 | 1.2E-25 | – | |
| PRINTS | 734 | 747 | 14 | 1.2E-25 | – | |
| MobiDBLite | 901 | 924 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Glutamate biosynthetic process | The chemical reactions and pathways resulting in the formation of glutamate, the anion of 2-aminopentanedioic acid. | ||
| Molecular function | Glutamate synthase activity | Catalysis of the formation of L-glutamine and 2-oxoglutarate from L-glutamate, using NADH, NADPH or ferredoxin as hydrogen acceptors. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on the CH-NH2 group of donors | Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
| Molecular function | Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces NAD+ or NADP. | ||
| Molecular function | Iron-sulfur cluster binding | Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0224700.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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