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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0331400 |
| Transcript ID | LotjaGi1g1v0331400.1 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nuclease domain-containing protein 1; TAIR: AT5G07350.1 TUDOR-SN protein 1; Swiss-Prot: sp|Q8VZG7|TSN1_ARATH Ribonuclease TUDOR 1; TrEMBL-Plants: tr|I1KBV2|I1KBV2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0331400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:78782372..78789363) extracted from Lotus japonicus Gifu genome v1.2.
AAAGGTCTCTCTTCTTACTCTTTGCTAAATCTAGGATGATGGAGAATTAGATATGGGTGTGACCGTGTGACTTGTTTAGT TGTCTTAAGGATTCTCATTTCTCAGGGGCATTTATCGTAATTACTCTACAAAACGAGGGGTACAATCTCAACCAGCATTC AACAGTTTATACAAAAACCCGTTTCCTCCGAGTTCCACTTTCTTCCACGACCACCACCGTGTTTCGCAACCTCCGCCTCG TAACTGTAACACTGAAAACTCTTGCTCCGCCGCATCGTGTTCCGGCGACGGATCCATTTCGCATAACACAAGAACCCTAA AAAACTCGTGAGAATTGTTCTGTTTTTCACATTCGGATTCAGCTAAGCAGATCCGAACTGAGAACCATTTCAAGGTACCG CCGCTGAAACTCGATCGCATTTCCTATATGATTATCCGATCCGTTTCATTCCGATAATTCCATGCAGTTTTTCCAAAATC TCAAGTTTTCATGGATCTGAGTTTTGATTTTCTTCACTGTTTTTTGCATTCCGTTTTGCACCGGTTGCATGACGTTATTA CCTGAAATTGCGTTTGTCTTTTTGTATTTAATGGCTTTGAATTACATTGAAGTTTGCTGAATCGTGTTTGGTATTGGTTT GACTTTGTTGCAGATCGTGCGGTGCGGTGAAGAATGGCATCGGCTGCGACTGGAGCTACAGGATGGTACAGGGGAAGGGT GAAGGCGGTTCCTTCAGGGGATTGCTTGGTCATTGTGGCCGTTGCTAGCTCCAAGCCTGGTCCTCTGCCTGAAAAATCAA TCACTCTGGCTTCTCTTATTACTCCTAGACTGGTAATTTCACAATATTTCAATAAATTATGAGATTGAAAACTAGAACCG TCAATGAAGATCTTGAGACTCTGTGCTGAGTAATTGCATTTCTCTGTTTTGATTTTAATTGCATTGGTGTTCTGTTGTTT GGATATTTGGGAATTTCGCTAGGCGCGGAGAGGCGGTGTGGATGAACCATTTGCATGGGAAAGCAGAGAGTATCTGAGGA AGCTCTGCATAGGGAAGGTGGGAAGCCTAGAGTTGCGCTCTAGTGTGATAACTTGGTTGAGTGCTCTGGTTTTGTCTTCT TCTGACTGTGTGTTTGGCGTGATGTGTTGTTATTTCAACAGGAGGTGACTTTTAGAGTTGATTACAATGTGGCGTCCATC AATCGAGACTTTGGAACCGTTTTTCTTGGTGAGAAGAATGTTGGGGTGTTGGTTGTTTCTCAAGGATGGGCAAAGGTTGA AATTGAATTGTGATTTCCCATTTAGATGTGCTGTGTTTGGATTACATTCTACTTTTTGAATTGCATTGTTGATTGTGAAC TTGTTCATGCAGGTCAGAGAACAGGGCCAGCAGAAAGGAGAAGTGAGTCCCTACCTGGCAGAATTGTTACGGCTTGAAGA GCAAGCTAAACAGGAAGGCCTTGGTCGTTGGAGCAAGGTTTGTTTGGGTTTTCCTCTATAAACTAAAATGAATTTTCAAA AAGCTGTAATTAAGGTGTGCTTTTTCAAACACACTGCTATTACTGTGTGATGCAGTACCTCAATACTGCAGTTCCATCAC ATGATGCGATCCCCAATTTGAATCTAGAAATCCCTATTGTCATTATATCAAAATCGTCCTGATTACATGTGACATTTAAT AATTCACTTTTCTATTGCTGAAATGACCATTTGAATTTTCTTTCATATTTCAAATTAACATGTAATATAGAATGAACTCG TGCTTGCTTATATTTTATAGATATCATCTTCTACTCCCATTTAAATTGATCGAAAATGGACAGATGTAGTTGCTAATTCA CGTTTACCGTGACCTCATGAGTGTAGCATATATGATTTTATGGTTATTCCAGGTTCCTGGTGCTGCTGAGGCATCCATCA GAAATCTACCACCTTCTGCCATTGGTGATGCTAGTAACTTTGATGCTATGGGTTTATTGGCTGCAAACAAGGGATCTCCG ATGGAGGCAATTGTTGAGCAGGTTCGTGATGGCAGTACTCTCCGAGTCTACTTGCTCCCGGAGTTTCAGTTTGTCCAAGT TTTTGTTGCTGGAATTCAGGTATGTTACATAAATGTGTTGCTATTGCTACCGTTTATTTATACACGCCACTAATTGTTTT CCCTTCACACTAGTCCCCACAAATGGGAAGAAGAGCTGCACCCGAAACTGTAGTTGAAACAGAGTTAACAGCTGATGAAA ATGATGGAGATGTTCCTGGGGAACCTCGACCCCCGCTTACATCTGCTCAAAGACTTGCGGTTTCATCTTCTACTGAAACT GCAGCTGATCCTTTCGGACCTGATGCAAAATTTTTCACTGAGATGCGTGTATTGAATCGAGATGTAAGTAACATGTTTCT GTAAGTTATATTCCTTGTGCATTTATCAAAATTTTAATAATTCAAATGGGTATGCAGGTTCGGATTGTTCTAGAAGGCGT GGATAAGTTCAGCAATTTGATCGGGTCGGTGTATTATCCTGATGGCGAATCAGCCAAAGACCTGGCACTGGAACTTGTGG AAAACGTACGTCACTCACCTCTGTAGAGTGAGCCATGACTTTTTTTGTCTTAATCTATTCTTGATGAACCTGACTTGTTT GGTTCCATTGTTTTATACTGTAGAACTGCCTGACTGGTTTATGTGAGATTGAATTAAGTTTGTATTCGTTTGTATTTGTG CTTAATTTCAGGGGATCCAGTGAGGGGGCATTGTCAATACTTGGGAGTATATTATATATATGATTAGCATGATACACAAT TTGTATTAAAATTCCAATTGAGTATTTAATTAAGTAACCAAATACCAGCTAAATAGATTTGAAAAGCGAAACATTGTACT TGCTATCACTGCTGGCTTTATTTGCTTGAGTGGACTATCATATGAAAATATTGGTGATTCTTTTTCTTTTGACAAAAAGA GTAGACCTACTAATTATGAAGGTTTTATGATTCATCAATTGTTATTCATTGTTTTATTGTGTATCCTAGGTTTACGCAAT ATCTATATTGCATGACATTTACTGATTTCCCTGGTCTCTCTTCATGGACATTTAGAATGTTTATTCATTCCATGTCTTTT AATCTGATGAAATATCAGTCAAAATATTCTTAAAAATATTTCTCAATATTTTTTCCTGTTATATAGGGTTATGCTAAATA TGTTGAATGGAGTGCAAATATGATGGAAGAAGAGGCAAAGCGGAGGCTGAAGACTGCAGAGCTCGAGGCTAAGAAAAGCA GGCTAAGAATGTGGACAAACTATGTACCACCAGCTTCAAATTCAAAGGCAATTCATAACCAGAATTTTACTGGAAAGGTG AAATATTCTTCAATCATTTGTTCGTGACAACATGGTCAATCTTCAGTTATACAAGCATATCAATTTAACTTGATTTTTAC AGGTGGTTGAGGTTGTGAGTGGAGATTGCATCATTGTCGCTGATGATTCCATTCCGTATGGCAGCCCACTAGCTGAGAGG CGAGTTAACCTTTCAAGTATTAGGTGTCCGAAAGTAGGCAATCCTCGTCGAGATGAAAAACCAGCTCCCTATGCCCGTGA AGCAAAGGAGTTCCTAAGAACACGCCTCCTTGGTCGTCAAGTATGAAAATATCTTAAGTACCTTCTTTTAATATCATTAC TGAGTTCATTATAATTTATTAGTTCTGTTATGTTTCTCAGGTGAATGTAGAAATGGAATATTCTAGAAAGATTGTTCCTA CAGATGGATCTGCAGTTCCTTCACCAGCTGCTGATTCCAGAGTAATGGATTTTGGGTCAGTCTTCTTATTGTCTGCTACG AAAGCTGACAGTGATGATACCCCTTCATCTATTCCTTCAGCTGGAAGTCAGCCAACTGGTGTCAATGTTGGTGAATTGGT TGTTGGCCGTGGCTTTGGAACTGTCATTAGACATCGTGACTTTGAAGAGAGATCTAACTACTATGATGCCCTTCTTACTG CTGAATCGCGTGCCCTTTCTGGAAGGAAAGGGATCCATTCTGCCAAGGATCCTCCAGTGATGCATATAACTGACTTGACC ACCGTGAGAAAATTTATAATTATGCTTTAATTTCTTTTTACTCAGAAGTTCGTAAAATTTAACTCGATAATATATTCCCG GTTGATTCATATCAGACATCAGCGAAGAAAGCCAAAGACTTCTTGCCTTTCCTACATCGAAGTAGAAGGATTCCTGCTGT TGTGGAATATGTCCTCAGTGGCCATCGTTTCAAGTTGTTAATTCCAAAAGAAACTTGCAGCATTGCTTTCGCACTCTCTG GTGTCAGGTGTCCTGGTCGTGGTGAGCCTTATTCTGAAGAAGCAATTGCACTGATGAGGCGAAAGATAATGCAGAGAGAT GTAGAGGTAATTCAGTTGTTTAATGAACTTAAGGTTCCTTAATATTGCCTTGTTTTGTTAAATGTTTTAATTCTTGCAGA TTGAGGTGGAAACTGTTGATAGAAATGGAACGTTCTTGGGATCGTTATGGGAGTCAAGAACAAATGTGGCACTCACACTT CTTGAAGCTGGTCTTGCAAAACTTCAGACTTCCTTTGGCAGCGACAGAATTCCTGAATTTCATCTTTTGGATCGAGCTGA ACAATCTGCTAAAAAGCAAAAACTGAAAGTAAAATAGGATCCCAATAATGTTTGAAATTATCGCTTTTATTTCCCTGTTA ACTTTTCTAAAGTTAAACTCTTTTGCAGATCTGGGAGAACTTCGTTGAAGGAGAGGAAGTATCAAATGGCGCAAATGTTG AAAGCAAACAGCAAGAAGTACTTAAGGTGAGGGACACTATCTTACTAATGACACATCTTTTTTGTTTAAAACTGTGTGGA ATGACTTATCCCATTTTCGTGCTTCCACAGGTAATTGTTACAGAAGTCTTGGGTGGTGGTAAATTCTATGTCCAGACAGT TGGTGATCAAAAGATAGCATCCATTCAGCAACAGCTTGCTGCTTTGAACCTGAAAGAAGCTCCTGTGCTTGGTGCATTTA GTCCTAAGAAGGGTGACATAGTCCTTTGTTATTTTCATGCTGATAAGTCCTGGTACCGGGCAATGGTGAGTTCCAACCTG AAATCTTTCTTTTCTTTTGTCCTTTCACCCTTACTGGTGTAGGCATTGCATTCCATGGCTGAAAACATGTTGCCATTGGA TAAGGGCTGATGAAAAATATATGACTTGATGATTAAGTCACAGTGACCTGTTTCTTTAATATCTTTCCTCCTTTTTTCTG GATCTTTTAGTGCCCCCGCCCCGATCGACAACTTTGTTATTGATCTTTTATCCCTTAATCTGGTTTGAAGTTTACATCAG TCTGTTTATAAACCCTTTTTGCATATATGATGCAAACCTGCTTGTGTTTTAAGCTAATAATATTAATGTGACGTAGTTTC AGTCTCCTTAAACCAGGTATTTTTATATAAATATTATTCCTTTTCTTTCATGAATATGATTGACCTGAGATGATTTGATA TTTCATTATATGGGCCAACTCCATATGCATCTCTTCTTTATGACTTCTTTTTGTAATTTCCTATACTGTAATTTGAGGGT CAGAGTTCATGAGATGCTAAATATGAAGTGCATTACTTATATTTCACCTTCTCTGTTTCCACTCTAATTTCCTTTTTCCT TATGAAATGATGTATGGTGCCACATGCCTTTGTTTTCGTTATGCTGATAATTCATAATTGAATGTTGTAGGTTGTCAATA CACCTCGAGGACCAGTTGAATCTCCTAAGGACATATTTGAAGTATTCTACATTGACTATGGAAATCAAGAACAAGTAGCT TACAGTCAGCTACGGCCTCTTGATCAGTCCGTGTCTGCCGCACCCGGTCTTGCTCAATTGTGCAGTCTTGCATACATTAA GAGTCCAAGCTTGGAAGAGGATTTCGGCCAAGAAGCAGCTGAATATTTGAGTGAACTCACTTTAAGCAGTGGAAAAGAGT TCAGAGCCCAGGTTGAGGAGCGAGATACTTCCGGAGGAAAAGTGAAAGGGCAGGGAACTGGGACAATTCTTGCAGTAACT CTTGTTGCCGTGGATGCTGAGATCAGCGTTAACGCTGCCATGCTACAGGTGATTATAGTTGCTCACTTTTTGCTTGAATA TTCTCATAGTTTGATTCCCTGTGCAAACACTTCTCTGAACTTTTTATTTTCTTGTGGAATTTTCAGGAAGGACTTGCCAG GATGGAAAAAAGGAACCGGTGGGACAGAAAAGAAAGAAAGGTGGGTCTTGATAGTCTGCAAAAATTCCAGGACGATGCAC GCAAGGAACGGCGTGGAATGTGGCAGTATGGAGATGTCGAGTCAGATGATGAGGACACTGCTCCTCCGGCGAGAAAAGCC GGTGCTGGCCGCAGATGAGTGTAACAGACAGGAAGTAAATTATATGTTATAGACATCATGAGGGAAGGTTTAAATTATAG GCATGAGTTAGAGAGAAAAAGAAGGAAATGCCGTGCTTATTCCTTTGTAAGTTTTGTTTGATTTAATCTTTGTTTTAAAA ATTTTGTGTTAGGTTGATGGGACAATTGTTTTCTCTAGATGTCACAATAAGGTGCTTGCGGCAGGGTTAAGAACCCTCCT CAACTCATGTCATCAACTCTTACTACTTGAGGTGTCATTCGGGACTAAGTAATAATTTATGTTATTGTAATTTTATATTC TTTACTTTTATATTTAATAAAAAATAATTTTATCATATAATATTAATAAGCTATTCACTATTCACAAATATAACATATAT TGTCTAATAATATATGTAATGTATCATCTAAATTACCACGGTCGGACCTGGTTCAACCGCTCGACATCACTACATACGAG ATATTTTGGCCACGACCTTCATGACTGATGCTAAACTTGTTACAATCCAATGGTGACTGCATGTTCACTTGTCCCTTAGT GTGATACCTCCACTAGCAACGTCACCTTATAC
CDS sequence (LotjaGi1g1v0331400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCGGCTGCGACTGGAGCTACAGGATGGTACAGGGGAAGGGTGAAGGCGGTTCCTTCAGGGGATTGCTTGGTCAT TGTGGCCGTTGCTAGCTCCAAGCCTGGTCCTCTGCCTGAAAAATCAATCACTCTGGCTTCTCTTATTACTCCTAGACTGG CGCGGAGAGGCGGTGTGGATGAACCATTTGCATGGGAAAGCAGAGAGTATCTGAGGAAGCTCTGCATAGGGAAGGAGGTG ACTTTTAGAGTTGATTACAATGTGGCGTCCATCAATCGAGACTTTGGAACCGTTTTTCTTGGTGAGAAGAATGTTGGGGT GTTGGTTGTTTCTCAAGGATGGGCAAAGGTCAGAGAACAGGGCCAGCAGAAAGGAGAAGTGAGTCCCTACCTGGCAGAAT TGTTACGGCTTGAAGAGCAAGCTAAACAGGAAGGCCTTGGTCGTTGGAGCAAGGTTCCTGGTGCTGCTGAGGCATCCATC AGAAATCTACCACCTTCTGCCATTGGTGATGCTAGTAACTTTGATGCTATGGGTTTATTGGCTGCAAACAAGGGATCTCC GATGGAGGCAATTGTTGAGCAGGTTCGTGATGGCAGTACTCTCCGAGTCTACTTGCTCCCGGAGTTTCAGTTTGTCCAAG TTTTTGTTGCTGGAATTCAGTCCCCACAAATGGGAAGAAGAGCTGCACCCGAAACTGTAGTTGAAACAGAGTTAACAGCT GATGAAAATGATGGAGATGTTCCTGGGGAACCTCGACCCCCGCTTACATCTGCTCAAAGACTTGCGGTTTCATCTTCTAC TGAAACTGCAGCTGATCCTTTCGGACCTGATGCAAAATTTTTCACTGAGATGCGTGTATTGAATCGAGATGTTCGGATTG TTCTAGAAGGCGTGGATAAGTTCAGCAATTTGATCGGGTCGGTGTATTATCCTGATGGCGAATCAGCCAAAGACCTGGCA CTGGAACTTGTGGAAAACGGTTATGCTAAATATGTTGAATGGAGTGCAAATATGATGGAAGAAGAGGCAAAGCGGAGGCT GAAGACTGCAGAGCTCGAGGCTAAGAAAAGCAGGCTAAGAATGTGGACAAACTATGTACCACCAGCTTCAAATTCAAAGG CAATTCATAACCAGAATTTTACTGGAAAGGTGGTTGAGGTTGTGAGTGGAGATTGCATCATTGTCGCTGATGATTCCATT CCGTATGGCAGCCCACTAGCTGAGAGGCGAGTTAACCTTTCAAGTATTAGGTGTCCGAAAGTAGGCAATCCTCGTCGAGA TGAAAAACCAGCTCCCTATGCCCGTGAAGCAAAGGAGTTCCTAAGAACACGCCTCCTTGGTCGTCAAGTGAATGTAGAAA TGGAATATTCTAGAAAGATTGTTCCTACAGATGGATCTGCAGTTCCTTCACCAGCTGCTGATTCCAGAGTAATGGATTTT GGGTCAGTCTTCTTATTGTCTGCTACGAAAGCTGACAGTGATGATACCCCTTCATCTATTCCTTCAGCTGGAAGTCAGCC AACTGGTGTCAATGTTGGTGAATTGGTTGTTGGCCGTGGCTTTGGAACTGTCATTAGACATCGTGACTTTGAAGAGAGAT CTAACTACTATGATGCCCTTCTTACTGCTGAATCGCGTGCCCTTTCTGGAAGGAAAGGGATCCATTCTGCCAAGGATCCT CCAGTGATGCATATAACTGACTTGACCACCACATCAGCGAAGAAAGCCAAAGACTTCTTGCCTTTCCTACATCGAAGTAG AAGGATTCCTGCTGTTGTGGAATATGTCCTCAGTGGCCATCGTTTCAAGTTGTTAATTCCAAAAGAAACTTGCAGCATTG CTTTCGCACTCTCTGGTGTCAGGTGTCCTGGTCGTGGTGAGCCTTATTCTGAAGAAGCAATTGCACTGATGAGGCGAAAG ATAATGCAGAGAGATGTAGAGATTGAGGTGGAAACTGTTGATAGAAATGGAACGTTCTTGGGATCGTTATGGGAGTCAAG AACAAATGTGGCACTCACACTTCTTGAAGCTGGTCTTGCAAAACTTCAGACTTCCTTTGGCAGCGACAGAATTCCTGAAT TTCATCTTTTGGATCGAGCTGAACAATCTGCTAAAAAGCAAAAACTGAAAATCTGGGAGAACTTCGTTGAAGGAGAGGAA GTATCAAATGGCGCAAATGTTGAAAGCAAACAGCAAGAAGTACTTAAGGTAATTGTTACAGAAGTCTTGGGTGGTGGTAA ATTCTATGTCCAGACAGTTGGTGATCAAAAGATAGCATCCATTCAGCAACAGCTTGCTGCTTTGAACCTGAAAGAAGCTC CTGTGCTTGGTGCATTTAGTCCTAAGAAGGGTGACATAGTCCTTTGTTATTTTCATGCTGATAAGTCCTGGTACCGGGCA ATGGTTGTCAATACACCTCGAGGACCAGTTGAATCTCCTAAGGACATATTTGAAGTATTCTACATTGACTATGGAAATCA AGAACAAGTAGCTTACAGTCAGCTACGGCCTCTTGATCAGTCCGTGTCTGCCGCACCCGGTCTTGCTCAATTGTGCAGTC TTGCATACATTAAGAGTCCAAGCTTGGAAGAGGATTTCGGCCAAGAAGCAGCTGAATATTTGAGTGAACTCACTTTAAGC AGTGGAAAAGAGTTCAGAGCCCAGGTTGAGGAGCGAGATACTTCCGGAGGAAAAGTGAAAGGGCAGGGAACTGGGACAAT TCTTGCAGTAACTCTTGTTGCCGTGGATGCTGAGATCAGCGTTAACGCTGCCATGCTACAGGAAGGACTTGCCAGGATGG AAAAAAGGAACCGGTGGGACAGAAAAGAAAGAAAGGTGGGTCTTGATAGTCTGCAAAAATTCCAGGACGATGCACGCAAG GAACGGCGTGGAATGTGGCAGTATGGAGATGTCGAGTCAGATGATGAGGACACTGCTCCTCCGGCGAGAAAAGCCGGTGC TGGCCGCAGATGA
Protein sequence (LotjaGi1g1v0331400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASAATGATGWYRGRVKAVPSGDCLVIVAVASSKPGPLPEKSITLASLITPRLARRGGVDEPFAWESREYLRKLCIGKEV TFRVDYNVASINRDFGTVFLGEKNVGVLVVSQGWAKVREQGQQKGEVSPYLAELLRLEEQAKQEGLGRWSKVPGAAEASI RNLPPSAIGDASNFDAMGLLAANKGSPMEAIVEQVRDGSTLRVYLLPEFQFVQVFVAGIQSPQMGRRAAPETVVETELTA DENDGDVPGEPRPPLTSAQRLAVSSSTETAADPFGPDAKFFTEMRVLNRDVRIVLEGVDKFSNLIGSVYYPDGESAKDLA LELVENGYAKYVEWSANMMEEEAKRRLKTAELEAKKSRLRMWTNYVPPASNSKAIHNQNFTGKVVEVVSGDCIIVADDSI PYGSPLAERRVNLSSIRCPKVGNPRRDEKPAPYAREAKEFLRTRLLGRQVNVEMEYSRKIVPTDGSAVPSPAADSRVMDF GSVFLLSATKADSDDTPSSIPSAGSQPTGVNVGELVVGRGFGTVIRHRDFEERSNYYDALLTAESRALSGRKGIHSAKDP PVMHITDLTTTSAKKAKDFLPFLHRSRRIPAVVEYVLSGHRFKLLIPKETCSIAFALSGVRCPGRGEPYSEEAIALMRRK IMQRDVEIEVETVDRNGTFLGSLWESRTNVALTLLEAGLAKLQTSFGSDRIPEFHLLDRAEQSAKKQKLKIWENFVEGEE VSNGANVESKQQEVLKVIVTEVLGGGKFYVQTVGDQKIASIQQQLAALNLKEAPVLGAFSPKKGDIVLCYFHADKSWYRA MVVNTPRGPVESPKDIFEVFYIDYGNQEQVAYSQLRPLDQSVSAAPGLAQLCSLAYIKSPSLEEDFGQEAAEYLSELTLS SGKEFRAQVEERDTSGGKVKGQGTGTILAVTLVAVDAEISVNAAMLQEGLARMEKRNRWDRKERKVGLDSLQKFQDDARK ERRGMWQYGDVESDDEDTAPPARKAGAGRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 980 | 980 | 0.0 | ||
| PANTHER | 6 | 982 | 977 | 0.0 | – | |
| PANTHER | 6 | 982 | 977 | 0.0 | – | |
| SUPERFAMILY | 9 | 151 | 143 | 1.57E-29 | – | |
| ProSiteProfiles | 10 | 151 | 142 | 26.157 | ||
| SMART | 10 | 151 | 142 | 9.8E-26 | ||
| Gene3D | 10 | 155 | 146 | 1.6E-38 | ||
| Pfam | 43 | 151 | 109 | 4.4E-10 | ||
| SUPERFAMILY | 183 | 368 | 186 | 4.71E-26 | – | |
| ProSiteProfiles | 186 | 364 | 179 | 30.286 | ||
| SMART | 186 | 364 | 179 | 1.5E-29 | ||
| MobiDBLite | 238 | 258 | 21 | - | – | |
| Pfam | 267 | 363 | 97 | 9.7E-14 | ||
| Coils | 340 | 360 | 21 | - | – | |
| SUPERFAMILY | 375 | 561 | 187 | 1.31E-22 | – | |
| Gene3D | 376 | 565 | 190 | 2.1E-46 | ||
| ProSiteProfiles | 378 | 557 | 180 | 24.149 | ||
| SMART | 378 | 557 | 180 | 8.2E-14 | ||
| Gene3D | 567 | 712 | 146 | 1.4E-48 | ||
| SUPERFAMILY | 581 | 714 | 134 | 1.57E-27 | – | |
| ProSiteProfiles | 587 | 714 | 128 | 26.214 | ||
| SMART | 587 | 714 | 128 | 7.5E-30 | ||
| Pfam | 616 | 714 | 99 | 1.4E-14 | ||
| Pfam | 732 | 855 | 124 | 1.1E-20 | ||
| Gene3D | 737 | 969 | 233 | 9.6E-68 | ||
| Gene3D | 753 | 849 | 97 | 9.6E-68 | – | |
| SMART | 779 | 843 | 65 | 4.2E-8 | ||
| ProSiteProfiles | 780 | 845 | 66 | 16.326 | ||
| CDD | 784 | 837 | 54 | 1.56069E-11 | – | |
| SUPERFAMILY | 791 | 974 | 184 | 3.01E-18 | – | |
| ProSiteProfiles | 854 | 968 | 115 | 17.343 | ||
| Pfam | 862 | 967 | 106 | 1.2E-8 | ||
| MobiDBLite | 965 | 984 | 20 | - | – | |
| MobiDBLite | 965 | 990 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | RISC complex | A ribonucleoprotein complex that contains members of the Argonaute family of proteins, small interfering RNAs (siRNAs) or microRNAs (miRNAs), and miRNA or siRNA-complementary mRNAs, in addition to a number of accessory factors. The RISC complex is involved in posttranscriptional repression of gene expression through downregulation of translation or induction of mRNA degradation. | ||
| Biological process | Gene silencing by RNA | Any process in which RNA molecules inactivate expression of target genes. |
Expression pattern of LotjaGi1g1v0331400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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