Domain Predictions — View

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PS50304

Source: ProSiteProfiles

Description

Tudor domain profile.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 16

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v1387020.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: staphylococcal nuclease domain-containing protein 1-like [Glycine max] gi\|356516458\|ref\|XP_003526911.1\|	Domains Coil G3DSA:2.30.30.140 G3DSA:2.40.50.90 IPR002999 IPR016071 IPR016685 PF00565 PF00567 PIRSF017179 PS50304 PS50830 PTHR12302 PTHR12302:SF2 SM00318 SM00333 SSF50199 SSF63748 cd04508 mobidb-lite	19
Lj4g3v0013170.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: survival of motor neuron-related-splicing factor 30-like [Cicer arietinum] gi\|502126585\|ref\|XP_004499363.1\|	Domains G3DSA:2.30.30.140 IPR002999 IPR010304 PF06003 PS50304 SM00333 SSF63748 cd04508 mobidb-lite	9
Lj4g3v0013170.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: survival of motor neuron-related-splicing factor 30-like [Cicer arietinum] gi\|502126585\|ref\|XP_004499363.1\|	Domains G3DSA:2.30.30.140 IPR002999 IPR010304 PF06003 PS50304 SM00333 SSF63748 cd04508 mobidb-lite	9
LotjaGi1g1v0331200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclease domain-containing protein 1; TAIR: AT5G07350.1 TUDOR-SN protein 1; Swiss-Prot: sp\|Q8VZG7\|TSN1_ARATH Ribonuclease TUDOR 1; TrEMBL-Plants: tr\|I1KBV2\|I1KBV2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0331200	Domains Coil G3DSA:2.30.30.140 G3DSA:2.40.50.90 IPR002999 IPR016071 IPR016685 IPR035437 PF00565 PF00567 PIRSF017179 PS50304 PS50830 PTHR12302 PTHR12302:SF9 SM00318 SM00333 SSF50199 SSF63748 cd04508 mobidb-lite	20
LotjaGi1g1v0331200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclease domain-containing protein 1; TAIR: AT5G07350.1 TUDOR-SN protein 1; Swiss-Prot: sp\|Q8VZG7\|TSN1_ARATH Ribonuclease TUDOR 1; TrEMBL-Plants: tr\|I1KBV2\|I1KBV2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0331200	Domains Coil G3DSA:2.30.30.140 G3DSA:2.40.50.90 IPR002999 IPR016071 IPR016685 IPR035437 PF00565 PF00567 PIRSF017179 PS50304 PS50830 PTHR12302 PTHR12302:SF9 SM00318 SM00333 SSF50199 SSF63748 cd04508 mobidb-lite	20
LotjaGi1g1v0331400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclease domain-containing protein 1; TAIR: AT5G07350.1 TUDOR-SN protein 1; Swiss-Prot: sp\|Q8VZG7\|TSN1_ARATH Ribonuclease TUDOR 1; TrEMBL-Plants: tr\|I1KBV2\|I1KBV2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0331400	Domains Coil G3DSA:2.30.30.140 G3DSA:2.40.50.90 IPR002999 IPR016071 IPR016685 IPR035437 PF00565 PF00567 PIRSF017179 PS50304 PS50830 PTHR12302 PTHR12302:SF9 SM00318 SM00333 SSF50199 cd04508 mobidb-lite	19
LotjaGi1g1v0331400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclease domain-containing protein 1; TAIR: AT5G07350.1 TUDOR-SN protein 1; Swiss-Prot: sp\|Q8VZG7\|TSN1_ARATH Ribonuclease TUDOR 1; TrEMBL-Plants: tr\|I1KBV2\|I1KBV2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0331400	Domains Coil G3DSA:2.30.30.140 G3DSA:2.40.50.90 IPR002999 IPR016071 IPR016685 IPR035437 PF00565 PF00567 PIRSF017179 PS50304 PS50830 PTHR12302 PTHR12302:SF9 SM00318 SM00333 SSF50199 SSF63748 cd04508 mobidb-lite	20
LotjaGi1g1v0331400.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclease domain-containing protein 1; TAIR: AT5G07350.1 TUDOR-SN protein 1; Swiss-Prot: sp\|Q8VZG7\|TSN1_ARATH Ribonuclease TUDOR 1; TrEMBL-Plants: tr\|I1KBV2\|I1KBV2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0331400	Domains Coil G3DSA:2.30.30.140 G3DSA:2.40.50.90 IPR002999 IPR016071 IPR016685 IPR035437 PF00565 PF00567 PIRSF017179 PS50304 PS50830 PTHR12302 PTHR12302:SF9 SM00318 SM00333 SSF50199 SSF63748 cd04508 mobidb-lite	20
LotjaGi1g1v0331400.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclease domain-containing protein 1; TAIR: AT5G07350.1 TUDOR-SN protein 1; Swiss-Prot: sp\|Q8VZG7\|TSN1_ARATH Ribonuclease TUDOR 1; TrEMBL-Plants: tr\|I1KBV2\|I1KBV2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0331400	Domains Coil G3DSA:2.30.30.140 G3DSA:2.40.50.90 IPR002999 IPR016071 IPR016685 IPR035437 PF00565 PF00567 PIRSF017179 PS50304 PS50830 PTHR12302 PTHR12302:SF9 SM00318 SM00333 SSF50199 SSF63748 cd04508 mobidb-lite	20
LotjaGi1g1v0331400.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclease domain-containing protein 1; TAIR: AT5G07350.1 TUDOR-SN protein 1; Swiss-Prot: sp\|Q8VZG7\|TSN1_ARATH Ribonuclease TUDOR 1; TrEMBL-Plants: tr\|I1KBV2\|I1KBV2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0331400	Domains Coil G3DSA:2.30.30.140 G3DSA:2.40.50.90 IPR002999 IPR016071 IPR016685 IPR035437 PF00565 PF00567 PIRSF017179 PS50304 PS50830 PTHR12302 PTHR12302:SF9 SM00318 SM00333 SSF50199 SSF63748 cd04508 mobidb-lite	20
LotjaGi1g1v0331400.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclease domain-containing protein 1; TAIR: AT5G07350.1 TUDOR-SN protein 1; Swiss-Prot: sp\|Q8VZG7\|TSN1_ARATH Ribonuclease TUDOR 1; TrEMBL-Plants: tr\|I1KBV2\|I1KBV2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0331400	Domains Coil G3DSA:2.30.30.140 G3DSA:2.40.50.90 IPR002999 IPR016071 IPR016685 IPR035437 PF00565 PF00567 PIRSF017179 PS50304 PS50830 PTHR12302 PTHR12302:SF9 SM00318 SM00333 SSF50199 SSF63748 cd04508 mobidb-lite	20
LotjaGi1g1v0331400.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclease domain-containing protein 1; TAIR: AT5G07350.1 TUDOR-SN protein 1; Swiss-Prot: sp\|Q8VZG7\|TSN1_ARATH Ribonuclease TUDOR 1; TrEMBL-Plants: tr\|I1KBV2\|I1KBV2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0331400	Domains Coil G3DSA:2.30.30.140 G3DSA:2.40.50.90 IPR002999 IPR016071 IPR016685 IPR035437 PF00565 PF00567 PIRSF017179 PS50304 PS50830 PTHR12302 PTHR12302:SF9 SM00318 SM00333 SSF50199 SSF63748 cd04508 mobidb-lite	20
LotjaGi1g1v0331400.8 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclease domain-containing protein 1; TAIR: AT5G07350.1 TUDOR-SN protein 1; Swiss-Prot: sp\|Q8VZG7\|TSN1_ARATH Ribonuclease TUDOR 1; TrEMBL-Plants: tr\|I1KBV2\|I1KBV2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0331400	Domains Coil G3DSA:2.30.30.140 G3DSA:2.40.50.90 IPR002999 IPR016071 IPR016685 IPR035437 PF00565 PF00567 PIRSF017179 PS50304 PS50830 PTHR12302 PTHR12302:SF9 SM00318 SM00333 SSF50199 SSF63748 cd04508 mobidb-lite	20
LotjaGi4g1v0001700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Survival of motor neuron-related-splicing factor 30; TAIR: AT2G02570.1 nucleic acid binding/RNA binding protein; Swiss-Prot: sp\|Q6DEY1\|SPF30_XENTR Survival of motor neuron-related-splicing factor 30; TrEMBL-Plants: tr\|I3SL72\|I3SL72_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0001700	Domains G3DSA:2.30.30.140 IPR002999 IPR010304 PF06003 PS50304 PTHR13681 PTHR13681:SF26 SM00333 SSF63748 cd04508 mobidb-lite	11
LotjaGi4g1v0001700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Survival of motor neuron-related-splicing factor 30; TAIR: AT2G02570.1 nucleic acid binding/RNA binding protein; Swiss-Prot: sp\|Q6DEY1\|SPF30_XENTR Survival of motor neuron-related-splicing factor 30; TrEMBL-Plants: tr\|I3SL72\|I3SL72_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0001700	Domains G3DSA:2.30.30.140 IPR002999 IPR010304 PF06003 PS50304 PTHR13681 PTHR13681:SF26 SM00333 SSF63748 cd04508 mobidb-lite	11
LotjaGi4g1v0416800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclease domain-containing protein 1; TAIR: AT5G07350.1 TUDOR-SN protein 1; Swiss-Prot: sp\|Q8VZG7\|TSN1_ARATH Ribonuclease TUDOR 1; TrEMBL-Plants: tr\|I1KP14\|I1KP14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0416800	Domains Coil G3DSA:2.30.30.140 G3DSA:2.40.50.90 IPR002999 IPR016071 IPR016685 IPR035437 PF00565 PF00567 PIRSF017179 PS50304 PS50830 PTHR12302 PTHR12302:SF9 SM00318 SM00333 SSF50199 SSF63748 cd04508 mobidb-lite	20

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	6.25