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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR018300
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 18 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.572s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0097809.1
n.a. branched amino acid transaminase [Vigna unguiculata] gi|457866473|dbj|BAM93581.1| chr0 41372969 41379192 +
2 domain predictions
1 GO term
Lj0g3v0334729.1
n.a. PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Glycine max] gi|356510642|ref|XP_003524046.1| chr0 175245986 175250863 +
2 domain predictions
1 GO term
Lj0g3v0334729.2
n.a. branched amino acid transaminase [Vigna unguiculata] gi|457866473|dbj|BAM93581.1| chr0 175247137 175250863 +
2 domain predictions
1 GO term
Lj2g3v1983990.1
n.a. Branched-chain-amino-acid aminotransferase [Medicago truncatula] gi|357482487|ref|XP_003611530.1| chr2 28891316 28897266 -
2 domain predictions
1 GO term
Lj4g3v0412790.1
n.a. PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like isoform X1 [Cicer arietinum] gi|502142305|ref|XP_004504892.1| chr4 5440131 5451484 -
2 domain predictions
1 GO term
Lj4g3v0412790.2
n.a. PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like isoform X1 [Cicer arietinum] gi|502142305|ref|XP_004504892.1| chr4 5440131 5457253 -
2 domain predictions
1 GO term
LotjaGi1g1v0364300.1
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 LjG1.1_chr1 84027691 84034012 -
2 domain predictions
1 GO term
LotjaGi1g1v0364300.2
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 LjG1.1_chr1 84027691 84034987 -
2 domain predictions
1 GO term
LotjaGi1g1v0364300.3
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V1K9|A0A072V1K9_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 LjG1.1_chr1 84029051 84034006 -
2 domain predictions
1 GO term
LotjaGi1g1v0364300.4
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V1K9|A0A072V1K9_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 LjG1.1_chr1 84029778 84032784 -
2 domain predictions
1 GO term
LotjaGi1g1v0364300.5
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 LjG1.1_chr1 84029778 84033127 -
2 domain predictions
1 GO term
LotjaGi1g1v0364300.6
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 LjG1.1_chr1 84029778 84034768 -
2 domain predictions
1 GO term
LotjaGi1g1v0364300.7
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V1K9|A0A072V1K9_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 LjG1.1_chr1 84029778 84034768 -
2 domain predictions
1 GO term
LotjaGi1g1v0364500.1
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364500 LjG1.1_chr1 84067303 84091043 -
2 domain predictions
1 GO term
LotjaGi1g1v0364500.2
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364500 LjG1.1_chr1 84069184 84074731 -
2 domain predictions
1 GO term
LotjaGi2g1v0412400.1
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT3G49680.1 branched-chain aminotransferase 3; Swiss-Prot: sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic; TrEMBL-Plants: tr|I3S9H6|I3S9H6_LOTJA Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi2g1v0412400 LjG1.1_chr2 90932364 90938724 -
2 domain predictions
1 GO term
LotjaGi4g1v0044400.1
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G50090.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotransferase 7; TrEMBL-Plants: tr|A0A151SI87|A0A151SI87_CAJCA Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi4g1v0044400 LjG1.1_chr4 5235187 5247016 -
2 domain predictions
1 GO term
LotjaGi4g1v0044400.2
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G50110.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6; TrEMBL-Plants: tr|A0A151SI87|A0A151SI87_CAJCA Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi4g1v0044400 LjG1.1_chr4 5235195 5243157 -
2 domain predictions
1 GO term