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LotjaGi1g1v0438500.3

Overview

Field Value
Gene ID LotjaGi1g1v0438500
Transcript ID LotjaGi1g1v0438500.3
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Pentatricopeptide repeat-containing protein; TAIR: AT4G28010.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010; TrEMBL-Plants: tr|G7L6K3|G7L6K3_MEDTR TCP-1/cpn60 chaperonin family protein; Found in the gene: LotjaGi1g1v0438500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:93339862..93354291) extracted from Lotus japonicus Gifu genome v1.2.

CTCTCTCAGTCAGAAACAACAAACAGAGAACCATGATGCCTAAGCGCCTCCTTAACCATCCTCGCTCCACGTTCTCCGTT TCTGTTTCTCCCTTCCATGCTTCTTCTTCTTCTTCTTCTTCTTCAATCCCCAACGTTTCTGACAAGCCCAATCGTCCTCC CTCTCTCTCCGAAGCAGTTTCCCTCTTTCACCGTGCAGTTGATGATCCTTCTTCAGTGCCATCCGCATCGTCCTGCAACT CCCTCATTGACAGCCTGCGAAAGGCGAGACACCATGACCTGCTCTTGTCGGTTTATTCCAAGATGGTACGCGCTTCTGTT TTGCCCAGTTTTACTTCCCTCAGTGCTTTAATTGAGAGTTTTGTCAACACCCACAAGCCAAACTCGGCTTATGGGGTTCT GGGGTTGATGTTAAAGCGTGGTTTTGATGTTAATGTGTATAATTCCAACCTTGTGTTGAAGGGTTTTTGTCAAACTCGTG ATAATTGTGATAAGGCCATGGTTTTGTTTTGTCAAATGAAGAGGAATTGTGTTTTGCCTGATACCTTTAGTTACAATACC ATTATAAATGGACTTTGTAAAGCTAAGAGATTGGTAGAAGCTAGGGGTTTGTTTGAGGACATGAAGGCCGGGGAATGCCC GCCGAATTTGGTGACATTTAGTACTTTGATTGATGGTCTTTGTAAGAGTGGAGCGGTTGGCGAGGGTCTGGATTTGTTGG AGGAGATGAGGATGAAGGGTTTGGATGCAGATGTGTTTCTGTATAGTTCTCTCATTAGTGCCTTTTGCAGCATAGGTGAC ACTGAGAGGGGAAAACAACTCTTTAATGAGATGTTGGAAAAGAATGTTACTCCTAACGTGGTTACTTATAACTGTTTCAT GAAAGCTCTTTGCAAGGATGGGAAGTGGGAAGAAGCCTCCAAAATGTTGAATGATATGACGACTCGGGGAGTTCATCCTG ATGTTGTTGCTTATACAACTTTAGCTGATGGGCTGGGCAAAAATGGGAGGGCATCAGATGCAATGAAAGTATTGGATTTG ATGCTGCAAAAGGGGGAAGAGCCGAATACTGTAACATACAATGTCATCATAAATGGACTTTGTAAGGACGGTCGGGTTGA TGATGCACTTGGGATTTTAAAAATGATGGCGAAGAAGGGGAAGAAACCGGATGCCATTACCTACAACACGTTATTGAAAG GACTTTGTGGAGTTGGCCAAATTGATGAGGCAATGGACCTTTTCACACTGTTATTGAGCAAGGAGTTCCATATCAAGCCT GATGTCTTCACATTTAATTTTCTTATTCAGGGGCTTTGCAAGGAACGGCGTCTTCGTGATGCCGTAAAAGTCCATTCTAC AATGGTTCAAATGGGGTTTCCTGGTAACATAGTGACTTACAATATTTTGGTTGAGGGTTATCTAAATGTTGGAAAACTTA CTAAGGCATTGGAACTATGGAAATGTGCAGTAGACTTAGGATTTTCCCCCGACTCAATGACCTATAGTGTCATGATCAAT GGTCTTTGCAAAATGCAGATGCTAAGTATTGCAAAAGGACTTTTCAATAAAAGTAGAGCTTGTGGGGTTAGACCTGGAGT AAATGATTACAATGCACTGATGACATCCCTGTGCAGGGAAGGTAGTTTAGAGCAGGCTAGGAATTTATTTCGAGAAATGA GAAATATGAATCATGATCCTGATGTTGCCTCCTTTAATATAATAATTGATGGAACCCTCAAAGCAGGAGATCTTAAATCT GCCAAGGAATTGCTATTGGAGATGGTTCAATTCGATTTGGTCCCTGATGTTATTACCTTTTCTACGTTAATAAACAGATA TTCAAAACTTGGGCTGTTAGATGAGGCCATGTCGCTCTATGAGAGAATGGTCTCTTGTGGTCATGTACCAGATGCGGTTG TATTTGATTCTTTGCTGAAGTGTTATACTTTAAAGGGAGAGACTGAAAAAATCATTTCCTTGCTTCAACAAATGGCTGAT AAGGATGTTATCCTTGACTCAAAATTAACTTCTACCATATTGGAATGCCTTTGCAACTTTCCAAAAGGTCTTGATATAAA GAAGATTCTTCCAAAATTTTCCCAACAGACATCTAAAGGAGAAAGCATTAAATGCAACGAGCTCCTAATGAAACTGAATA AGGTTCATCCAGAGCTTCAATTATTTTCTGCATGAAAGTTCTTGTTTTCAAGAACATTACATCATGGAATGCTTAAGTAA GTTTTATATTATCTTTTGTCTAATTAGTTATGTTCCATACTTTGTTTACTTTTGTTGCTGAGGTTAAATAGCTAAAATTA TCAAGATGGTTTGGCTTCACTTCAGGTTGCTGTATCTCTTATGCTAGGACACACTTGTTCAGTCGCTGGTTTTGATCAGG TAAGACTTCCTGTCTATTTTATGCCTGCTTAGATCTGGGTTAATATACCATTGCTGGGTTTACTCTTGTATGTATAGAAT ATATTATTGGCTTAATTGCACTTTTAGGGTCACAAGCTCTGTCATTGACACATGTGAAGTGATATACTATTTGTGCTGGA GAGAATGTTTTATGCTCAGATTTGAGGTCTCAATTTGATGCTTTGGCTAATATTTTATTGCTGTTCAAAGGTTTGGAAAA GGAGTGGCAACTGAATAATATATTGCTGTCAATGTGACTTACTGAGGATAAAACGAGTTTTCTCGCTTTTGCTAAAGAAT CAGTGTGTGGTTTGTTTAGCTTCTCCATTTTCCTTATAGGCATTGTATGGAATTATTTCAGGCTCTTTTACCTTATGATT TTTATTTGCAAACTTCACATCCCATTAATATCATGGTTTCCACTTAACTATGGCTCAACCTTGATCAATTCTCCAGAGAT TTCATGAATATTAGGCTACCACAGCAAGGTCACAAGGTGCGAAACGCGTCCTGGACTCTTCCTAATGCAGGAATATGGAA GGTGAATGTTGATGGTGCAGCAAGGGGAAGTCCAGGCATTTGCGGGATTGGAGGAATTCTAAGAAATGCTAAAAATGAAA TTAGAGGGTTTTTCTCCAAGAACACGGGTGTGGGTTTTGCTTTTGAAGCAGAAGTTACGGCTATTTTTGAGGCTCTGTCA TTGTGTCATCAACATTGCATTCATATTATCATCATTGAGTGTGATTCTTCCTTAGCTGTTGGATGGGTAAATCGCAGGAA AAATAGGCCATGGAAGCTGTCTAATTTGCTAAATCAGATTGATTTTATCATTCCTTTGGTTAATTGCATGGAGGTGAGGC ATAGATTTCGTGAGGCTAACACAGAAGCAGATGCATTAGCAAAGCGTGGATCTAATAATACAAGGCCTCTTTACTACCTC AACAACGCCTCTTTACTACCTCAATAACTCTGTTTGTGCTTAAATTTACTGATATTGTTACGTCTTTGCTATCTACTGGT GTATTGCTATTGGTTCTGGAAGGGATAGTAAAGGCTGTGTTATTATGAGATGGGAAGATGAATGGGACAGTATATTGGTT TCAGTTTGGATGAGTGTAGCGGCATACTGTGCAACCCGAACGTGTTGAACGGCAGGATACATAGAACAGCCCATGTAATT TCTTTGTTCAGATACATGTTTGATATCTTTTTTAGCTTTGTTATTTGGTTCCCCAGTGCAATTGCTTCATGTTTATTTGG TGATTGGCTCTTGTTTGAGTACTCTTTTTCCTCCCTTGGTTTTTTCCACTGGGTTTTTCCTTGGAAGGTTTTAATGAGGC TCTTTCAAGAGTCGCCATAGGCACCAATACAGCAATGGGGACTTGAGGCCTTTGGCTTGAAGTAGTTGGGGTTGAGGCTT TTCCTTGTTTTGTATATTTTGTTTTTCATATCTACATGAGAGGATTGTTCTCATGAATATCTTCATTAATAAAGTTTCTA TTTGTTCGCAAAAAAAAAAACTATGGCTCAACCTCTGCTGCGAAGATACTCACTCTTAGTGCCGTCTATATTTTGTTTTT TTTAGGATGGATTGATAAAGTTTTAGGAGGCTATGCAAAATTTCCTTGGCAAAATTTAAAAGAAGTGTTATTGTTGTTGA CAGAGTTCTTTATGGATCGGATAATCTCCTATTTATTCTGAAATTGTAATCATTTTGTTCGCCTCTTTTTTTCCATTTTG CCAATTTCAAATTAACAAATTTCTTAAAAAGATAAGGAAAGCAGGAAACTTTGGTTGTCTCATCAAGCGATATATATCCT TGCAATTATTAGAATAAACTTACCTATATGTCTAAGTTGTACAAGAATAATATGAGAAATTTACTGCAATTTAGTGTTTA AAAATTGAGTTGTGGTTGAGGACTAACATTAGGCACAAGCATTAAAAAAATATCAACTCATTTTAACGAGGTATGATTGG CTGCGTAGAGTCATAGCAACTCATTATTTCCTGCTGATGTAGATAAAATTCTGCAAGCTGTGTGTTGCTTACTTGTTTAG TTCGAAAGTTAATGTTCAAAAAAAAAAATATCATGAGAAATTGTGTGTTTAGTTTAAGTCTTCAATTTTCCATTGCTTTT AATCTTGTTTGATGTAGTTTAAATCCATAGTTATTTGCATAATGTTTTAGTTCAACAGTATTGATCATTGTCTGTGCCTG GGTGCAGATGTTGGAGATCAGGAACTTTTCCTCTGTCGGATGGAAGTCGTGTAGGAATGTATGACCGAAATACTCAATGT TGCTTCTATTAATATAATTCATTTAGACATTAACACCGATGGCATAAAGTAATGGAAGTCAAGTGGTTTATAAGTGTGCA TGTCCCCATGGCATTGAATTTGAGTCAGTTAACTTCTGCAAACAGCATCCACAAGTAGCACTACCATCACCACTACTTGT AGAAGATTGTAGGGGTAGTTCACTTCAAGCTGCAGAGACTACAAAAGAGAAATACCAGGTGATGAGGTTGAGTTTCTGAT TATTTTATGAAGATGAAGATCTATTCGGAGCCTGAGATGGAGTGCAACATCATGAAATAAGGACAACATCACCCCCACTT TCATTTGCTTATTGACAGAATCCAGATGGAAGGGACAAAATTAATCGTGTCACTAACATTTGGGACTCAAATAATTTATT TTGACAATTGGGGGCAAATCCCGCAATGGCAATGATTAAGAACAAAAAAACAATTAAATCTAGTATTTGTTAGAAGAAAG CACACAATCAAAAACACCTTATTAGAGAGTTTTGAAAGCAACTATTTAGCAATATGTGTTCTTATGTTCATCGTTGATTC CTACTTCTCAACGAAGAGTTATTTTATCATTTTCGAATTTCGACTACTTAAGTCTTATACCTCGCACGAGTCACATTACT AGTATTGAATAAAAAAGAAATGAAAATTCAAAGTAAATAAAAAAATGTAGCCACAAACTAAATAACTTAATGTAAATAAT TACAAGTTTCTAACTAAAAAATTAGTGGTGTTAGTTTAGTTGTTACGATAGTTAATATATTTGATTAGTTTTTTTACAGC AACCATTATGTATTATATTTAATGAATGATTGTTTGTGGAGAATATTTTTAAAGTAAATTGATAAAAAAATTTTTTTTGA TACATCGGAAAAGATACTAGTAATGTGACTTGTGCGTGCATGAGGTGTATTTATTTTTCTATTGCATGAAATATTTCAAA ATTTGTGTTACTTTGATTACATTTATGAAAGAAAGTTTACGGATTAAAATAATAAAAATAAATTTAGAAATAAGAAAACA TACATTTGAAAGTTTTTTCTTGAGATGAACCCTATAGCATATAGCAAAAGAGAGGGGATCAACATTGAGTTACCACCTGG GCACAACGCAATAAAAGAACATCATTTAATTACAACACCCTCCTTCCTTCGCGATCAGAGCCCCCACAGGACGACATCAT CTCATATTCAGACTTTAAGACATCATCGAACCGGCAAACAACTAGAGAAATTTCTAGGACGAGTACCGCATCAGGAACAT CTTCAAGATCTGAAACATCAACAGACATGTAACCATCAAGAATAATTTATGGGAAAAGATCAGAAAACATACATCTCAAG GCCGCCGCATAAACCCTTGAGATCCCGGACATCATCCTTTTTTCATTGTCAGAGAAAGCCACCATATGCTGAACCACCGC TAATAGGAGAACGACATCGCTCCCACCGTTCGAGGATGAAGATGCCCATCTATCACCGACGATAACTTAGCTCCGGGCTC CTCCTCTCTCTGACCAACACTAACCTTTTTTTTGATAAACGACCAGCACTAACTTGTTGCGGAAACCTCGCTAGAGCCAC TAACAAGATCTAACCGCCCTAGACTTTTCTCTCCTCAACCCATATGTCTCTAACTCTTACCACTTAACCTATACTATGCT AATTAATCTCTTTTAATCCGTGTTTGAGATCAGAATTCATTCCCAAAGAAAAAAATGAACTGAAATTGGTTCCCTCCTCT ATTCCTTTCTATGCAAACACGACACATCCCAGCCAGCCACCGAAATCTCACCAGCAGAACCATGAAACCAAAACGCATCC TTGCCCCTCCTCGTACCAGGTTCTCTGCTCCGACCAGTGTATCTGCTTCTTCTTCAACGCCCCATGTAGAATCCCAGCGT AACAAACCCAATCCTCCTCTGTTGCTTTCTGTAGCCGTTTCTCTCTTTCAGCGTGCCATTCAGGACCCTGATTCATTGCC CTCAGTATCAGCCTGCAACTCCCTCATAGATAATCTCCGAAAGGCAAGACACTATGATCTTCTCTTGTCCGTTTATTCTA TGATGGTTGCCGCTTCTGTTTTGCCTGCTTTTACTTCCTTGAGTGCTTTGGTTGAAAGTTTTGTGAAGACCCACCAGCCA AATTTTGCGTTTGGGGTACTGGGTTTGATGATGAAGCGTGGTTTTGAGGTTAATGTGTATAACGCGAAGCTTGTGTTGAA GGGTTTTTGTCAAAGTGGTGACTATGACAGGGCCATGGTTTTGGTTTGCCAAATGAGGAGGAATTGTGTTTTGCCTGATG TCTTTAGTTACAATACCCTTATAAATGGACTTTGTAAAGCTAAGAGATTGGTAGAAGCTAGGGGTTTGTTTGAGGCCATG AAGGCCGGGGAGTGCCGGCCGAACTTGGTGACTTTTAGTGTTTTGATTAATTGTCTTTGTAAGAATGGGGCGGTTAAGGA GGGTTTGGATTTGTTCGAGGAGATGAAGAAGACTGGTTTGGATGCAGATGTGGTTGTGTATAGTGCTCTCATTAGTGCCT TTTGTAACAGTGGTGACATTGAGAGGGTTAAAGAACTCTTTAATGAGATGTTGGAAAAGAATGTTGCTCCCAATGTGGTT ACTTATAGTTGTTTGATGCAAGGTCTTTGCAAGAAAGGGAAGTTGGAAGAAGCCTCCAAAATGTTGAATGATATGACGAC CAGGGGAGTTCATCCTGATGTTGTTGCTTATACAATTTTAGCTGATGGGCTTGGCAAAAATGGGAGGGCATCCGATGCAT TGAAAGTGTTGGACTTGATGGTACAAAAGGGGAAAGAGCCAAATGCTTTAACATACAATGTCATTGTTAATGGACTTTGT AAGGAAGGTCGGGTAGATGATGCGCTCGGGATTCTAGAAATGATGGTAAAGAAGGGGAGGAAACCTGATGTGTTTACCTA CAGCACATTATTGAAAGGACTATGTGGCGTTGGCAAAATTGATGAGGCAATGGACCTTTGGAAGTTGTTGTTGAGCAAAG AATTCCATATGAAGCCTGATGTCTACACGTTTAATCTTCTAATCCAGGGACTTTGCAAGGAGCGGCGTCTTGATGATGCT GTAGGGATCTATTCTACCATGGTTAAAAGGGGGTTCCCTTGTAACATAGTAACTTACAATATTTTGATTCATGGTTATCT AAATGCTGGAAAGCTTACTAAGGCATTGGAACTATGGAAATCTGCAGTAGACTTGAAATTTTCCCCTAATTCAGTGACCT ATAGTGTCATGATTAGTGGTCTTTGCAAAATGCAGATGCTTCGTTTCGCAAGAGGGCTTTTCGTTAAAAGAAGATATTCT AGGATTAGACCCACAGTAATTGATTACAATGCACTAATGGCATCGTTGTGTAGAGAAGGTAGTTTGAAGCAGGCTAGGGA TTTGTTTCAAGAAATGAGAAATGTGAACTGTGATCCTGATGTTGTCTCCTTTAATATAATAATTGATGGAATCCTCAAAG GAGGAGATGTTGAATCTGCCAAGGAATTGCTATTAGGAATGCTTAACATGGATTTGGTCCCTGATGCTTTTACCTTTACT ATATTAATAAATAGGTTCTTCAAGCTTGGGAAGTTGGATGAGGCTATGTCTCTCTATGAGAGAATGGTCTCTTGTGGCCA TGTACCAGATGCTGTTCTGTTTGATTCTTTGCTAAAAGGCTATAGTGTGATCGGAGAGACAGAAAAAATCATTTCATTGC TTCAACAAATGGGTGACAAGGGTGTTGTTCTGAACTCAAGATTAACTTCTACCATCTTGGCTTGTCTTTGTAACATCACA GAAGATCTTGATATAAAGAAGATTCTCCCAAATTTTTCGCAACATACATCTAAAGGAGCAAACATTAAATGCAATGAACT ATTGATGAGACTGAATAAGGTTCATCCAGAGCTTCAATTATTTGCTGCGGGATAGCTTTTGTTTTAAAAGAAGTGATGTC GTGGCACTTTTAAGTAAGTCTATATTGTCTTTCATTAAATAAACTATGTTCCATGCTTTATCTACTTTTATTGCATAGGT TAAATAGCCAGACTTATCAAGTTGGTTTGGTTTTATTTCAGTTGCTGTGTCTAATGCTAGCGCAGACTTGTTCAGTCTTG GTTTTGATCAGGTAAGACACTTCCTATCTGCTTTGTGCCTGCTTAGATCTGGGTTACTTTTCCATTCATTTCTCTAGTAT ATGAATGTTAGATAATTTTATCAATCCTATGGAGATGTCATTGTTACCTCCTCATGTATTGAAAAAGATCTTCCAAAGCG AGCCTTTATGTAAAGTAAAGGTGTATCCACCTTTAAATTGTTGTAGGTCTAGGTCCAAGTTACGATGTTCTCCAAATTAA ATCAATGGTGGATTATTTGCTCACTTTGGAGACAATCCAATAGGAAACAAAGAAGAACAGTTCTAGAAATGAGTATTATT CCACTAAAGAGGAGCTCAAAGTTCTTGCAAGAAGAGAAAAAAAAGACTCACCCCATCCTAGAGCCTAGGTCTCTAACTAT TCTCAATGGTTTCCTTAATCCCTACTCTCCTCTCAGCATACGAATTTGGCCACGCCTCTAGTGAGCAGCTCCCTACACTA CCTTCTTTCTCCTTGATTAAACTATCCAAGTCTTGGGTCCGCTTGGACCATGGTCTCTTTGGCTTCACTAACATTAGAAC TCAGCTCGGCTCTATCATTACCAATAAGAGCCTTGTCCTCAAAAGGGTAAATTTGGAAATTGGCAGTGGATGATGAAGTG AACTCATCCTCCCAAGTAGTGTCATAAACAGATCTATTTTTCCCCTTAACCAGATATTGCTTATAAGCTCCCCCATGTCT AATCACATCTTTGCTCGACAGAACTGTTTAAGGTTCATCGCTGTCATCCAACTCAGCTTCTTTGTCCTTCCGATAAAGAA GCTTATGTTGTGCCTGTTCCAACAGCCTTCTTCAATTGTGAAATCTGGAAAAACAGGATGGATTAGGGAATTTGAACATT GTTGTCAAGATCGCTTCTTAATCATAAGATTGCACCATCATGGTCAGGTGGCTTCTCTGATCTAAATCGCAACCTCAGTT AAATTGCAGTTGGATCAGCGATCTTAAGCTTGAGATTGTGAGTTTTGAGCACTAGTTGTCTTGGTAAGACCGTAAGAATT ATCATGCTATACTTACTCTCGTTGATCATGACATTTCTTTCTGGGTGTTGGTGCAATTAGGCATTTTTTTTTTTTTCTTT TTGTTCCATTGAGTTTTCAGAAAATATGTTAGAACTGGTACCAAACAGAACAGAGAAACCGAACTAGTCTGGCTCTGGCC TAACCAAACAGTTTCGCACCCTCCCTTAGGAAAGCAGAAATGCACCCCCCTTTAGGAAAAGCAGAGTTGCAAGTTAAGAG ATAACTAGATAAGGAAAACTGGAAACGTTTATTAGAAATATCGCTCTTGAGAAGAATTACAAACTGGACACCAATAGCAG CCACCAAATCCTAATTCTCCTAAAAACTCCCGAATAGAGGTACAGCCAACTTATTTATACTAAACCAAATAACCTAATAA AATATAATAGTAAAATATAGTATCTAATGCTGACTGGATAAATTAAACTAATAAAAATATAAAATCCTAATTCTATTTGG CTAGGTTTTCAGCACACCACCTTGTGCTGTTTGGCTAGGGTTCAGCACAACCCCATCCCTATCTTGGTGCCTCACATAGA CCTTAGTTATAGGAGGTTTAGGTCTAAGCCTGTCAAATTATTGAATAGAAGTATACATAACTGTGTAGCCAGTGTTTGTT CTGAGTGGATTGCTCTCATGTTTATGGTCTCTCTTACAAGTGTTTCAAATGAATTACCTTTTTAAGTGTGCAAGAGGGTG GGCAGTATTGCTAGTGTCACATGTGTAATGGTTTGTTGATATTCCACAAAGTCATTAATATATTGTGTATTATTTGATCT GATATCAAATTTTGTGATAGTAAATTTTGTTCGGAAATTTGATTCTCATCTTGAGGCCAAGTCAAATTTCTCTCATGCCA ATGAAACTTATGCTAATGGTCTTTATCCTAGGAGTGTTGAAATGCCCTCTGACATAGCTGAAAATGGAGAAGATTGCGAA GGAATAGAGCCGTGAATATGTTTTTCTTATCGTTCTAGTGTTGTAGGAGTATTTTGATTAGCATGGAACTGGAGGGAATT GGATTGCTCTTCCTTAGAACGATGGTAAAATCACATCATCTGATAGGACACCGATCCTATCTACAGGGAGAATATTATAG AAGAAATGAAATGCATTAATCACTGAATGGAAATCAAGGAAATAACCAGAGCTAAGCTCGCAGCTATGGACGAATCTCCA TGCCCACGGCTTAGGCCAAAAAATTAACAAGCTAACATAATGCCCACATGAACTATCCCTCCACTAACATAAACATACAT TCTCTTTTCTCTAACTAACTATTTTTTCCCTCCTTTACTATTTTTGGTTTGGGTCAGTCTTTTGAGTCAAATGACCCACG ATACCGCCTCCCTTAAAAGTTTCTTTGTCCTCAAGGCAGAATCATAGAAGTCAGGATATTGCCCACGAACTCACGAAGCA CACCTTCTGCAACCCAAGTTGCTTCTACAGTAGGTTATACATCCACAAAATCAACCGCTCATGGATGCTCTTTCCCCAAT AGATGTTGGTTCGAGGAGCTAGATTTGCTTCTGGTTCCATTGGAATAGGCTCCTCTACCTCTAATCCATGAGGAACATCA TGTCTTACAACATGACTGCCAATCGCCTTTTTATTTTGAGAAGCATGGAACACTGGATGTATCTGGAATGTTTCTAGCAG CATCAAATTGTCAAGTTGCTGCATATTTCAATATATTGACGTGACAATATAAATTATAGAAAAGCACATCACACATTGGT CAAGGTTCATTAGTTTGGCCTAGTATGTTACTTTTGAACTCTGCATATAATGAACCTTTACCTAAAGAGTTTCTCTCAAA CATGCTGGTTGCTAAATAGCTACGGAAGCAAAGGGAAGACTAAGTTGGAACCTATCAAATTATATATAGAGAGATATATA AAAAATATGTGTGGCATGAGATTGATTAAATTTTGAGTCATTTTGATTGATTTTAAACTCTAGTATTTCAATAGAGAAAT TGGTGCAATGGATATAATAGATACAAGTCTCTTAACTTAATACCATTCATAGCATGTTGACCAAAATAAACATTGTTTGT GGTATGAAGAATAAACATTTCTATAGAGTAATGCAATGGCTATTTGGGTACATGAATCTTGTAAAAAAATTGGATCTGCT GTTTCTAGCAGCAAGCATGCAGGTTGTCCACAATCCTTGCAGCTGCAAAAAATGGCAAGCATATAAAGGTTAAAAAAAAC TGAGATGTCATTTCACTTTGCATCAAGTTTGTGCTGTTGTTATTTTACTTTGTGACCATGTAGTGGTCCAGCCATCCCAC TGTCATCAATTGGAAAGAAGCTTAATTTTTTTGATTTTAGTAGAGACAAGAATGATAACAGTTTATTGTCCTTAACATAT CATCAGATTTTTCCGACAACTCTTGGCATTATTTAGCATTCTATCAGATGGCTCTCTCTATTTCGGCTCATTGCTGCACT TGGTAGAACACTAGTTGTTTCTATTTCACTAAGTACCTTGTCATTGCAAGTGGTATTTGTGCTAGGAAATTTTACTGTGG CCAAAGGCAAGTCACTTATGACTTCTTAATTTTGCATACACCTTTTAGCTTAACATGTTATTTACAAACAACAAAGACAA ATTTGTATGAAACCAGTGTTAGTTACTTATATTACATGAACTTTAAACATTGTAAAATATCCTTTGCAACCAAATACAGA CTCTAGAATTGATGCACCTACATTTGGAAAACTACTTCTCATCTAGAGGTTTACATTATGAAGATTATTGGTATTGGATC TGCATTGGTTTTTGCTTGGGTTTTCTCTTCTCTTTAACCTTCTTTTCTTTACTGCATTGACATATTTGAATCGCATGTTA TATATTCTTTTAATTTTCAAGGCCTCTGATCGATTAAACTTTTCACTGTTGGTAACCATTTTAATGTTAGACCAAAATTT CAGATTTAGGAGATTCAGAAGCGGTCATTGCGGATGGAGGTCACAAGAAGAATGAAAGTCCATTATCTTGACAACCTTTA AATTGTCATCAATTGTAGGAGGAGAGCAGTCACACCATGGAAACGAGAAGAGACGAGGAGGAAAATGAATGTGTGAGAAA ACAGCGGTTGAAATTGTGGAACAACAAGGAAATAGGGATTTACTAAAGGGAGGCAAGTTCGTACCAGAGGTGGGGAGGAG GATGACGTCAGGCTCAAAGGAGGCACGTGAGGGTTTTTTGGAATTTGTTAATCTTAGCCATTAATCTTAATCCAAGGGTT AGAAATTGCCCCTCTCACTCTCGCATAAAAAACCTCCCTTTCACTAGATATGCTCCCTATACATAAGATGATGACTTTGA TATATGATTAGGTCTAAATAGATCATATAGATGTGGAAAAAGTTGCGGAGTGAGTTGGGTTCACTATCTCGGGGCCATCA CTGTTCTTGGACGAGGAAGACAATAATTTCTGTAGCCTTTAAGCTAACATTGGTAGCAGGTATACATTATTAGAACATTT TTATGCACTGTAGAGTATAGATATATAGCTACACCCACCAGTGATTTTGCTTCAACAATTTTTTTTGGCTCATCCTGACT TGCAATTAAATCTGAAATCATTTATCCAGACCAAGATTATTCACATGGACATTCTTTTACCCCTTTTCCTTCAATCAAGG ACGAATTTCTCTGGTGAAATTCATTAAAGGGTGTAAACATAATAACTATGAATTTTGACTACCATTTGTCATTATCTAGA ATCTGTCTTGTTTGGAAAGCTGATCTTCCACTTGGATGCCAAGTTTAGATCTAGCGACATCACCCACTCAGATGTTTGAC TGATGAAGACATTTATTTATTTTCCTTCACAATATTGCAGGTATTCAATGATAGCTGCTCAGTGGCCAGAAAGGACTGAC AATGATATCAAGATCTACTGGAACGCCAAACTAAAGAAGAAGCTCATGGATTTGTTTCCTGCATCTTATTAGATGAAACA AACTTATCGGTCTCTCCTCAAAACCCACTATTTCCTTCTCATTATAGAGACTATTGCAGCCCAACAGAAACCATGTCTTC AAGTGGCCTTGGACCGGTCTCCGATCCTTCAAGTGTTTAGACGGGCACAAGATGCAATATTTTGAAGTGAAGGACGTTGC AGTTTGATAGGTTGCTGTGTGAACAGTACCTGGGTTGCTTTAATTTAAATTAAGTCAGTTATGGACAGTTTGTGTTAGTT ATTAGTTACTACTTACTAGTTGTGGGTAGTTTTATGATTACAGCAGTTAGGTAATTGCTATGGTTTGAACTTAAATTTAA ATTATACAGGAGTAGTTATAAATAAGAGTTGTATCTTCTGTTAGGATTCATTCAGAAGTTGTGAGTTTAATGGGGAGAGA CTGGACTCTCGAAATTCCAGAATCTACTTGAGAAAGACTGGCTCTCGAACACGAATGTTGTATACTTATTCTATAAATAA ATTCTGTTCTTATCACAGTTCATATGATAG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0438500.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATGCCTAAGCGCCTCCTTAACCATCCTCGCTCCACGTTCTCCGTTTCTGTTTCTCCCTTCCATGCTTCTTCTTCTTC TTCTTCTTCTTCAATCCCCAACGTTTCTGACAAGCCCAATCGTCCTCCCTCTCTCTCCGAAGCAGTTTCCCTCTTTCACC GTGCAGTTGATGATCCTTCTTCAGTGCCATCCGCATCGTCCTGCAACTCCCTCATTGACAGCCTGCGAAAGGCGAGACAC CATGACCTGCTCTTGTCGGTTTATTCCAAGATGGTACGCGCTTCTGTTTTGCCCAGTTTTACTTCCCTCAGTGCTTTAAT TGAGAGTTTTGTCAACACCCACAAGCCAAACTCGGCTTATGGGGTTCTGGGGTTGATGTTAAAGCGTGGTTTTGATGTTA ATGTGTATAATTCCAACCTTGTGTTGAAGGGTTTTTGTCAAACTCGTGATAATTGTGATAAGGCCATGGTTTTGTTTTGT CAAATGAAGAGGAATTGTGTTTTGCCTGATACCTTTAGTTACAATACCATTATAAATGGACTTTGTAAAGCTAAGAGATT GGTAGAAGCTAGGGGTTTGTTTGAGGACATGAAGGCCGGGGAATGCCCGCCGAATTTGGTGACATTTAGTACTTTGATTG ATGGTCTTTGTAAGAGTGGAGCGGTTGGCGAGGGTCTGGATTTGTTGGAGGAGATGAGGATGAAGGGTTTGGATGCAGAT GTGTTTCTGTATAGTTCTCTCATTAGTGCCTTTTGCAGCATAGGTGACACTGAGAGGGGAAAACAACTCTTTAATGAGAT GTTGGAAAAGAATGTTACTCCTAACGTGGTTACTTATAACTGTTTCATGAAAGCTCTTTGCAAGGATGGGAAGTGGGAAG AAGCCTCCAAAATGTTGAATGATATGACGACTCGGGGAGTTCATCCTGATGTTGTTGCTTATACAACTTTAGCTGATGGG CTGGGCAAAAATGGGAGGGCATCAGATGCAATGAAAGTATTGGATTTGATGCTGCAAAAGGGGGAAGAGCCGAATACTGT AACATACAATGTCATCATAAATGGACTTTGTAAGGACGGTCGGGTTGATGATGCACTTGGGATTTTAAAAATGATGGCGA AGAAGGGGAAGAAACCGGATGCCATTACCTACAACACGTTATTGAAAGGACTTTGTGGAGTTGGCCAAATTGATGAGGCA ATGGACCTTTTCACACTGTTATTGAGCAAGGAGTTCCATATCAAGCCTGATGTCTTCACATTTAATTTTCTTATTCAGGG GCTTTGCAAGGAACGGCGTCTTCGTGATGCCGTAAAAGTCCATTCTACAATGGTTCAAATGGGGTTTCCTGGTAACATAG TGACTTACAATATTTTGGTTGAGGGTTATCTAAATGTTGGAAAACTTACTAAGGCATTGGAACTATGGAAATGTGCAGTA GACTTAGGATTTTCCCCCGACTCAATGACCTATAGTGTCATGATCAATGGTCTTTGCAAAATGCAGATGCTAAGTATTGC AAAAGGACTTTTCAATAAAAGTAGAGCTTGTGGGGTTAGACCTGGAGTAAATGATTACAATGCACTGATGACATCCCTGT GCAGGGAAGGTAGTTTAGAGCAGGCTAGGAATTTATTTCGAGAAATGAGAAATATGAATCATGATCCTGATGTTGCCTCC TTTAATATAATAATTGATGGAACCCTCAAAGCAGGAGATCTTAAATCTGCCAAGGAATTGCTATTGGAGATGGTTCAATT CGATTTGGTCCCTGATGTTATTACCTTTTCTACGTTAATAAACAGATATTCAAAACTTGGGCTGTTAGATGAGGCCATGT CGCTCTATGAGAGAATGGTCTCTTGTGGTCATGTACCAGATGCGGTTGTATTTGATTCTTTGCTGAAGTGTTATACTTTA AAGGGAGAGACTGAAAAAATCATTTCCTTGCTTCAACAAATGGCTGATAAGGATGTTATCCTTGACTCAAAATTAACTTC TACCATATTGGAATGCCTTTGCAACTTTCCAAAAGGTCTTGATATAAAGAAGATTCTTCCAAAATTTTCCCAACAGACAT CTAAAGGAGAAAGCATTAAATGCAACGAGCTCCTAATGAAACTGAATAAGGTTCATCCAGAGCTTCAATTATTTGCTGCG GGATAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0438500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MMPKRLLNHPRSTFSVSVSPFHASSSSSSSSIPNVSDKPNRPPSLSEAVSLFHRAVDDPSSVPSASSCNSLIDSLRKARH HDLLLSVYSKMVRASVLPSFTSLSALIESFVNTHKPNSAYGVLGLMLKRGFDVNVYNSNLVLKGFCQTRDNCDKAMVLFC QMKRNCVLPDTFSYNTIINGLCKAKRLVEARGLFEDMKAGECPPNLVTFSTLIDGLCKSGAVGEGLDLLEEMRMKGLDAD VFLYSSLISAFCSIGDTERGKQLFNEMLEKNVTPNVVTYNCFMKALCKDGKWEEASKMLNDMTTRGVHPDVVAYTTLADG LGKNGRASDAMKVLDLMLQKGEEPNTVTYNVIINGLCKDGRVDDALGILKMMAKKGKKPDAITYNTLLKGLCGVGQIDEA MDLFTLLLSKEFHIKPDVFTFNFLIQGLCKERRLRDAVKVHSTMVQMGFPGNIVTYNILVEGYLNVGKLTKALELWKCAV DLGFSPDSMTYSVMINGLCKMQMLSIAKGLFNKSRACGVRPGVNDYNALMTSLCREGSLEQARNLFREMRNMNHDPDVAS FNIIIDGTLKAGDLKSAKELLLEMVQFDLVPDVITFSTLINRYSKLGLLDEAMSLYERMVSCGHVPDAVVFDSLLKCYTL KGETEKIISLLQQMADKDVILDSKLTSTILECLCNFPKGLDIKKILPKFSQQTSKGESIKCNELLMKLNKVHPELQLFAA G
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Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP_GRAM_POSITIVE
SignalP-TM
1 23 23 - –
Phobius
SIGNAL_PEPTIDE_N_REGION
1 12 12 - –
Phobius
SIGNAL_PEPTIDE
1 29 29 - –
Phobius
SIGNAL_PEPTIDE_H_REGION
13 21 9 - –
Phobius
SIGNAL_PEPTIDE_C_REGION
22 29 8 - –
MobiDBLite
mobidb-lite
24 44 21 - –
MobiDBLite
mobidb-lite
24 43 20 - –
Phobius
NON_CYTOPLASMIC_DOMAIN
30 721 692 - –
Gene3D
G3DSA:1.25.40.10
35 185 151 3.4E-24
IPR011990
PANTHER
PTHR46128
56 233 178 6.0E-180 –
PANTHER
PTHR46128:SF1
56 233 178 6.0E-180 –
ProSiteProfiles
PS51375
64 98 35 8.966
IPR002885
Pfam
PF01535
67 94 28 0.23
IPR002885
TIGRFAM
TIGR00756
67 99 33 3.1E-4
IPR002885
ProSiteProfiles
PS51375
99 133 35 7.256
IPR002885
ProSiteProfiles
PS51375
134 169 36 8.923
IPR002885
PANTHER
PTHR46128:SF1
167 306 140 6.0E-180 –
PANTHER
PTHR46128
167 306 140 6.0E-180 –
Pfam
PF13041
169 218 50 1.3E-18
IPR002885
ProSiteProfiles
PS51375
170 204 35 12.814
IPR002885
SUPERFAMILY
SSF48452
171 410 240 8.91E-8
IPR011990
TIGRFAM
TIGR00756
172 205 34 9.4E-10
IPR002885
Gene3D
G3DSA:1.25.40.10
186 304 119 1.1E-38
IPR011990
ProSiteProfiles
PS51375
205 239 35 11.871
IPR002885
TIGRFAM
TIGR00756
207 240 34 2.9E-6
IPR002885
Pfam
PF12854
235 267 33 4.4E-7
IPR002885
ProSiteProfiles
PS51375
240 274 35 12.606
IPR002885
TIGRFAM
TIGR00756
243 276 34 9.2E-8
IPR002885
PANTHER
PTHR46128
271 408 138 6.0E-180 –
PANTHER
PTHR46128:SF1
271 408 138 6.0E-180 –
Pfam
PF13041
274 322 49 4.5E-17
IPR002885
ProSiteProfiles
PS51375
275 309 35 13.515
IPR002885
TIGRFAM
TIGR00756
277 311 35 2.1E-10
IPR002885
Gene3D
G3DSA:1.25.40.10
305 395 91 2.3E-31
IPR011990
PANTHER
PTHR46128
307 478 172 6.0E-180 –
PANTHER
PTHR46128:SF1
307 478 172 6.0E-180 –
ProSiteProfiles
PS51375
310 344 35 11.816
IPR002885
TIGRFAM
TIGR00756
312 346 35 1.9E-7
IPR002885
Pfam
PF13041
344 392 49 2.2E-18
IPR002885
ProSiteProfiles
PS51375
345 379 35 13.603
IPR002885
TIGRFAM
TIGR00756
347 381 35 1.1E-9
IPR002885
SUPERFAMILY
SSF81901
357 587 231 1.03E-10 –
ProSiteProfiles
PS51375
380 414 35 11.038
IPR002885
TIGRFAM
TIGR00756
382 412 31 2.6E-6
IPR002885
Gene3D
G3DSA:1.25.40.10
396 507 112 5.0E-29
IPR011990
PANTHER
PTHR46128
396 553 158 6.0E-180 –
PANTHER
PTHR46128:SF1
396 553 158 6.0E-180 –
Pfam
PF12854
413 444 32 3.0E-10
IPR002885
ProSiteProfiles
PS51375
417 451 35 11.444
IPR002885
TIGRFAM
TIGR00756
419 452 34 2.3E-5
IPR002885
Pfam
PF13041
452 500 49 1.9E-13
IPR002885
ProSiteProfiles
PS51375
452 486 35 11.213
IPR002885
TIGRFAM
TIGR00756
454 487 34 6.3E-5
IPR002885
PANTHER
PTHR46128:SF1
484 686 203 6.0E-180 –
PANTHER
PTHR46128
484 686 203 6.0E-180 –
ProSiteProfiles
PS51375
487 521 35 10.731
IPR002885
TIGRFAM
TIGR00756
490 522 33 1.6E-4
IPR002885
Gene3D
G3DSA:1.25.40.10
508 711 204 8.0E-41
IPR011990
Pfam
PF13041
521 567 47 8.9E-12
IPR002885
ProSiteProfiles
PS51375
522 556 35 11.553
IPR002885
TIGRFAM
TIGR00756
526 558 33 6.1E-8
IPR002885
ProSiteProfiles
PS51375
557 591 35 10.578
IPR002885
TIGRFAM
TIGR00756
560 593 34 1.7E-5
IPR002885
Pfam
PF13041
591 638 48 4.8E-9
IPR002885
ProSiteProfiles
PS51375
592 626 35 12.836
IPR002885
TIGRFAM
TIGR00756
594 628 35 2.9E-9
IPR002885
ProSiteProfiles
PS51375
627 661 35 8.649
IPR002885

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0438500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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