Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi1g1v0764100 |
Transcript ID | LotjaGi1g1v0764100.3 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Riboflavin kinase; TAIR: AT4G21470.1 riboflavin kinase/FMN hydrolase; Swiss-Prot: sp|Q84MD8|FHYRK_ARATH Bifunctional riboflavin kinase/FMN phosphatase; TrEMBL-Plants: tr|A0A0S3QZS5|A0A0S3QZS5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0764100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:133684905..133689590) extracted from Lotus japonicus Gifu genome v1.2.
TTTCTCCCAGCTTCACCAGCGCGCTTCATACCCAAAATCCCAAATGTTCCACCAAATATGAACCCTAATCCTCAAACTCC TCTGCTTGCCTTGCACTGTTCCTCGACAAATCCTAAGCCCTTACACATCGTTATTGAAAAATCTTCCTGGCTTCCTCACT TTCTCCCTGATTCAACTTACTTGGTAATTAAGTGGTTTTCAAACCTGAATTTACTTGATATGTGGAACTTATTGCATTGT AATGTAAATTTTTTGTTACTCAATTCTTTGCTGCTACCATGTTGTGGAACTTATATGCAGATGCTTGAGTACTATGCACA TAATCAAAAAGCCATATTTTGTATTTTGTCAAATACACACAAACACATAAAGGAGGAAATTTTAAATTTATCTGATTATG GACGGTTTTATCAGTTTGTGTGGCTGTCGTATTGCTTTCTGCAGAACATGAAGGAATTTCTTTGAAGGTCGCCAATTTAC AATCTTTATGTTGGCATAATTTCCAGATGCTTCACCCTTCACTTCTTGTGCCGAAAGCTCTCTGTTGTATTCTTGTGGTT TCTGAACCTTCATTTATTTCCAATGAGCAATTATTCTGTGTAGAGTGCTTCTTTGTTTAGTTTGAACAATTGTCTGAATT TATTTCATTATTTATTTATGTAACAGATTTTGGTCTGAGTGACAATATGTCGATTGCAAAGCCTTTTAGGAAGTGGATTA GTTGTGTTATCCTTGATTTAGATGGCACACTGCTCAACACAGGTCTGTTGTCCTGTTATCCGTCAACCCATCATGTCTCT GCTTTTGATTTTTGTATTTTCATTCCCTCAATTGAATAATAATAATAATCATCCAGTAGCTATATTTTCCTCATTCTAGT TGGCCGTTATTTCGTTACTAGTTCAATGATACTAGCAAGGGTGATTTAATTACAGATGGCGTTGTAGGCAATGTTTTGAA GTTCTCATTAGGAAAGTATGGAAAGGAATGGGATGGAAGAGAAGTTCTTAAAATTGTGGGGAAGACACCATTTGAAGCTG CTGCTGCAGTTGTAGAAGATTATGGACTTCCCTGTTCGACGACTGAATTTATTTCTGAGATTTCGCCTTTGTTCTCTGAT CAGTAATTATCTGTTGCATCATTCTTCTGAAGATTGTCTTTTTTTGTCTTTTTAAATGTGGACCATGCTTAGAGATATAT TTTCAATTAAATTTTGAATGTGAATACCGCTATATGCTTCCAATTATGGTTGAACTAACAATAACTGCTTAGTGCTTACT CTTTATGAATGTTTGGAGAAGGTGATTGAGGCCCTCTGGCTGCATTTGCTAGAGACTACCTTATCAAACAATAAAGTCTT GCATGTTATGTTTTAACCTTCCAAGTTGGTTTCTACTCTTCATGGTTAAAGAATGCACTTTCATAGCATATTTTGTGACG TTATACTATCTCCAGCGAAGCATCGCTTCAGAGTATTTATTTGAGGACACCCTGCTGTACCTTTAATTAGGGGGAGGTTA ACACTAGATTCGGCTACTATCTTCATTATTACCTTAGGAAATTTATTAACATATCAAGGCAATATATTGAAAATTTTGTC ACGTACCAATTAGTTTATGATCTGAAATCTTTGTGTATTATGTTTCGTATCGGAGATACAAGTATTTACTTGTTTAAAAA CATATATAGTGAATCATTTACTTGGTTGGTCCGTTCAATTGAATTCATAGTTCAAACTTCTGAGGAAGTTTCCCGCTAAA GTTTTTGCTCGATTCTCATTTTAGATGGTGCAACATTAAAGCACTTCCTGGTGCCAATCGGTTGATTAAACATTTGAAGA GTCATGGAGCTCCAATGGCTTTGGCATCAAACTCCCCAAGGGAAAACATTGAAGCCAAAATATCATTTCATGATGGTTGA TTTTTTTCGAGAACCTTAATCTTCTTATGCTCCTTTGCCTCTATGAATGTAAGTATGAGACTGTTTATTATTTTTTTCCC TGTCCATGCAGGATGGAAAGATTCTTTCTCTGTCATAATTGGTGGAGATGAAGTCAGAAAAGGGAAGCCTTCCCCTGAAA TGTGAGATTCCAAATGTATTGTTTGGCCTTGGTTACTTAGACTTTCTTGTGTTTCTTGTGTATAAGTCATATCTTTTGTC TTCTAAAATTATTGTGTTTTATTATTGCAGATTCGTTGAAGCGGCTAGGAGGTTAAGCATTGAACCTTCTTGCTGTCTTG TCATTGAAGACTCTATGTGAGTGTCTCTCTCCTGTTCTGACTCTGTCCTGTATATGGTTTCCTGTGCCAACTGAGTCTTC TTTGACTGTTACACTTTGTATTGGATTATTGTTTGCTTTTATATTCGCAATACCTCAGAATTTTTTTTTTTTTATCTCTG GATTTCTCATGAATTATATTTGTAATATATAACAATAGCCCCTCTTTTGGCCTCTTCGTGGAAAAAAAATTTAAAAAGTT CTGGAGAACCTTTAAACATCAGCCCCTAAGGGGTTCTGTTTGGATTTTGTAGTCTTTGAAATAAATCACCTAGTGGCTTA GGATGATTGTTATGTTGATAGCTTGGGTAGACAAAGTTACGTGCTGTGTACTTGGGATTAGTTTTTGGTTTTTTTTTTTA TAAGCAGGGGTTGGTTTTTGGTGAAGTGAAAATCTTTTTCTCGTAATTGATAAGTGCTTAATCAGGTGCAGGGTGGTGTG CGATTGACAGAGATAGAGTGATTGGGTGCATTTGGGACTTAGGGATTGTGATAAAAATTTGAGAGCATCCATATAATTTT TTTTTTCTCTCCTGGAAATTCCTACATAATATTCTTTTGAGTATATGTGTACAATTTGAATTACAATCTGCTCTTTGTAA TCATCATTTAAGCTTCCTTTTTGCAACATGTTCTTGCTTGCTTATTGATTTAGGCCTTGGCTTGTTACATCTTTCTGCAG AAGAACTGTTTTTCTGTATCCCATGAATGTTCTCTTTGATACTTTAAACTGGGGCTGTGGAATTATGTTAAAAGTCTAAC ATAATTTGAAAGGATTTTTATAGCACTTTCAAGTCGTTTGTATCTTTTCTTCTAGCATGATAGTCAAAATAATCCCCTTT CAATTCTGATTACATTTTGGTTAAACCCTCTCTGATTACAGTCTGCGGTGATGCCTACCTTGCATCTATCTTAGTCAGCA TACTTTACTTCAACTGAAGACTGCTTTCTTATTTTCTTCTAGGTTTTTATATAGACATGCTGATTTTTATCCTAGCCATT TTTCTTTATACCTGACTGCTGCCTTTCCTCTGTATCTTCTTTCTAAAAACATGTGTACATGGCTTCTTTAGACCAGGTGT TACTGCAGGTAAGGCTGCTGGAATGGAAGTGGTTGCTGTACCATCTCTTCCAAAACAGTCACATCTCTATACTGCAGCAG ATGAGGTGATCAATTCCCTGCTTGATTTGCAACTTGAAAAGTGGGGTCTACCTCCATTTGAAGATTGTAAACCTCTAATG CCTTAAGATAGTACCTTCTGTGCATATTGTGTTTCTTTTATCAGTATGCCATTTACATTTGAGCTAGTATTCTGAACTAT TGTAGGGGTTGAGGGAACTTTGCCCATAGATCCTTGGCATATTAGTGGTCCTGTCATCAAGGGATTTGGTCGTGGCTCAA AGGTCCTCGGAATCCCTACAGGTATGTTTCCACTTATTAATTGTGTAATATGACATGAAGCTGAAAAGTAGATAAGCGAA AAATAGGTGGTAGGTACGAGTATTTGTGGTTGCTTGTGATGTTTGTAACTTGTATTTCACTGAATATATTTGGATTATAC TATCTCAAAATAATTTCCGGCCTTTGATTATACCAACTGAATTTGTTGCATTATTTTCTTCCAGCTAATTTATCAGCAAA AGGCTATTCAGATCTCCTTGTGGAGCATCCTGCAGGAGTTTATTTTGGTTGGGCTGGATTACCTGGGAGAGGTATTTTTA AAATGGTTATGAGCATTGGTTGGAATCCATATTTCAACAACAAAGAAAAAACTATAGTAAGTTTTTTTATTAGAAACCTC TAGCTATTACTATTTGCCTCAGAATTTTCATATGATCTGTGTTTTTTCAATATAGGAACCATGGTTACTCCATGATTTCA GTGAGGATTTCTACGGGGAAGAACTGCGGCTTGTTATAGTTGGTTACATCCGTCCTGAGGTACAGCTGAATAAATATTTC TCCTCCAAGTTTTCTTCTCCATTTTCTTGAGTTTCGCTAAAATTGGGCACTCTTCATAACAGGCCAATTTTCCTTCCCTT GAAAGCTTGATAGCTAAGATTCATGCAGACCGTAGAGTTGCTGAGAGAGCTCTTGATCTTCCTTTGTATTCAAGTTATAA GAATGATCCATATTTGAGAACCTATTAGTACTGGTTCTAGTAATAATCACATGAAGAAACCCCTGCATTTCGACTGGGGG TTATTGATAGAGTACAAAATCCTCCTATTATTTGACATTAGCTCCATGATTCTAATTTTATCATAACTAAATTTGATTTG TAACACGCATAAATAGTAATAAAAAATAGCTATTAATTTCGTTTTAGTACTTTATTACGTGTCTGTTGGAAATTTGGGTC CTTATCAGAACTCCTGAATTGGGTTCAATTAAGATATGCAACACAA
CDS sequence (LotjaGi1g1v0764100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGATTGCAAAGCCTTTTAGGAAGTGGATTAGTTGTGTTATCCTTGATTTAGATGGCACACTGCTCAACACAGATGG CGTTGTAGGCAATGTTTTGAAGTTCTCATTAGGAAAGTATGGAAAGGAATGGGATGGAAGAGAAGTTCTTAAAATTGTGG GGAAGACACCATTTGAAGCTGCTGCTGCAGTTGTAGAAGATTATGGACTTCCCTGTTCGACGACTGAATTTATTTCTGAG ATTTCGCCTTTGTTCTCTGATCAATGGTGCAACATTAAAGCACTTCCTGGTGCCAATCGGTTGATTAAACATTTGAAGAG TCATGGAGCTCCAATGGCTTTGGCATCAAACTCCCCAAGGGAAAACATTGAAGCCAAAATATCATTTCATGATGGATGGA AAGATTCTTTCTCTGTCATAATTGGTGGAGATGAAGTCAGAAAAGGGAAGCCTTCCCCTGAAATATTCGTTGAAGCGGCT AGGAGGTTAAGCATTGAACCTTCTTGCTGTCTTGTCATTGAAGACTCTATACCAGGTGTTACTGCAGGTAAGGCTGCTGG AATGGAAGTGGTTGCTGTACCATCTCTTCCAAAACAGTCACATCTCTATACTGCAGCAGATGAGGTGATCAATTCCCTGC TTGATTTGCAACTTGAAAAGTGGGGTCTACCTCCATTTGAAGATTGGGTTGAGGGAACTTTGCCCATAGATCCTTGGCAT ATTAGTGGTCCTGTCATCAAGGGATTTGGTCGTGGCTCAAAGGTCCTCGGAATCCCTACAGCTAATTTATCAGCAAAAGG CTATTCAGATCTCCTTGTGGAGCATCCTGCAGGAGTTTATTTTGGTTGGGCTGGATTACCTGGGAGAGGTATTTTTAAAA TGGTTATGAGCATTGGTTGGAATCCATATTTCAACAACAAAGAAAAAACTATAGAACCATGGTTACTCCATGATTTCAGT GAGGATTTCTACGGGGAAGAACTGCGGCTTGTTATAGTTGGTTACATCCGTCCTGAGGCCAATTTTCCTTCCCTTGAAAG CTTGATAGCTAAGATTCATGCAGACCGTAGAGTTGCTGAGAGAGCTCTTGATCTTCCTTTGTATTCAAGTTATAAGAATG ATCCATATTTGAGAACCTATTAG
Protein sequence (LotjaGi1g1v0764100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSIAKPFRKWISCVILDLDGTLLNTDGVVGNVLKFSLGKYGKEWDGREVLKIVGKTPFEAAAAVVEDYGLPCSTTEFISE ISPLFSDQWCNIKALPGANRLIKHLKSHGAPMALASNSPRENIEAKISFHDGWKDSFSVIIGGDEVRKGKPSPEIFVEAA RRLSIEPSCCLVIEDSIPGVTAGKAAGMEVVAVPSLPKQSHLYTAADEVINSLLDLQLEKWGLPPFEDWVEGTLPIDPWH ISGPVIKGFGRGSKVLGIPTANLSAKGYSDLLVEHPAGVYFGWAGLPGRGIFKMVMSIGWNPYFNNKEKTIEPWLLHDFS EDFYGEELRLVIVGYIRPEANFPSLESLIAKIHADRRVAERALDLPLYSSYKNDPYLRTY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 5 | 378 | 374 | 1.7E-159 | ||
SUPERFAMILY | 11 | 216 | 206 | 7.34E-45 | ||
PRINTS | 11 | 22 | 12 | 3.1E-8 | ||
SFLD | 14 | 217 | 204 | 9.3E-27 | – | |
Gene3D | 14 | 213 | 200 | 5.0E-57 | ||
Pfam | 14 | 193 | 180 | 9.2E-26 | ||
SFLD | 14 | 217 | 204 | 9.3E-27 | – | |
Gene3D | 25 | 92 | 68 | 5.0E-57 | ||
TIGRFAM | 92 | 193 | 102 | 8.6E-16 | ||
PRINTS | 105 | 118 | 14 | 3.1E-8 | ||
PRINTS | 137 | 153 | 17 | 3.1E-8 | ||
PRINTS | 155 | 175 | 21 | 3.1E-8 | ||
Gene3D | 227 | 380 | 154 | 1.4E-56 | ||
SMART | 234 | 364 | 131 | 8.8E-39 | ||
SUPERFAMILY | 238 | 377 | 140 | 1.63E-43 | ||
Pfam | 238 | 362 | 125 | 2.0E-32 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Riboflavin kinase activity | Catalysis of the reaction: ATP + riboflavin = ADP + FMN + 2 H(+). | ||
Biological process | Riboflavin biosynthetic process | The chemical reactions and pathways resulting in the formation of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD). | ||
Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi1g1v0764100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…