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LotjaGi1g1v0794600.3

Overview

Field Value
Gene ID LotjaGi1g1v0794600
Transcript ID LotjaGi1g1v0794600.3
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Bifunctional fucokinase/fucose pyrophosphorylase; TAIR: AT1G01220.1 L-fucokinase/GDP-L-fucose pyrophosphorylase; Swiss-Prot: sp|Q9LNJ9|FKGP_ARATH Bifunctional fucokinase/fucose pyrophosphorylase; TrEMBL-Plants: tr|G7L443|G7L443_MEDTR L-fucokinase/GDP-L-fucose pyrophosphorylase; Found in the gene: LotjaGi1g1v0794600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:136570389..136575905) extracted from Lotus japonicus Gifu genome v1.2.

ACTCGAAGAAGAAAGAGATGGAAAGAAGGGCGAAACAGAAGGAGGACTTGACCTCCCTTCTTCGCAAATCATGGTACCAT CTCAGGTTATCTGTCCGTCACCCATCTAGGGTTCCGACATGGGATGCCATCGTCCTCACCGCCGCTAGCCCCGATCAAGC TCACCTCTACACCTGGCAGCTCAACCGGGCCAAGCGCTTGGGTCGGATCGCCCCATCCACTGTCACCCTCGCCGTCCCCG ACCCTCTTGGTTGCCGCATCGGCTCCGGCGCTGCCACCCTCAATGCCATTCACGCCCTCGCTCTCCATTACCACACCACC ACCCAGGTACCCTTCATTTCCTATTTCTCAGATTTCAACTAACTCAAAAAGGAATTTCAAATCTATAATCATTTATCACT GTTTTTTACTTACAGGTGTCAACTACCAATGGCACTGATGATTCTCTTCTTCTCCCAATGGCTACCTTGCTGGCCAATAA GCATATACTATTGCTCCATGCTGGAGGTGATTCTAAAAGAGTGCCTTGGGCTAATCCTATGGGGAAAGTGTTTCTTCCTC TTCCCTACTTGGCATCAGATGAGCCTGATGGCCCAGTTCCCCTGCTCTTTGATCACATACTTGCCATTGCTTCTTGTGCA AGACAAGCTTTTGGGGATCAAGGTTGTTTTCTTCATATATGCATTCATTCAAGTTAAATTTTATTGTTTGTTCTAGCCCT TTTCCCTGTCCTTTGTATATGACAGAACATAACTTCAAGTGTTTTAAATATCAAATTTTCAAACTTGTCCTGTATTTTAT CCCCTTTCCATATGTTAGGGAATTCTGTATATGGATATATATTCATTATTCAATATGGCATTAGTGATAAAAATTTAATT TAACCAAACACTTAACAACATTATCATTGTTCTTTCTCAATGGGATTTATTTGCTGTCTTTTTCTCTGGGGTTACCTGCT GCTGATGTTTGCATAAAAATTCATTCAATCCTCTCACAGGTGGAATGTTGACCATGACTGGTGATGTTCTTCCATGTTTT GACGCCTCTGTGATGATTCTTCCTAATGACACTTCGTGCATCATCACCGTTCCGATCACCCTTGATGTTGCTTCAAACCA TGGAGTTATTGTTGCAGCTGAAACTGAACGTTCAACTAAGAGTTATGCAGTCAGTTTAGTAGATAATCTCCTCCAGAAAC CTACTTTAGAAGAGCTAGTTGAAAATAAGGCTGTTCTAGCTGATGGTAGAACACTTCTTGATACCGGAATAATAGCAGTT AGAGGTAAGGCATGGTTGGAGCTTGTTACACTTGCATGTTCCTGTCAGCCAATGATTTCAGAGCTCCTAGAAAGCAAAAA GGAGGTACACTACATTGTTTGGTTTTTATGGGTGGAAAAGAAACGAAATGAAAGTATTAAATAATTAAATTCGTTGTTAT GCTTTTGTATATAGGGAATGAGAACAAATTGCTAAAACCAAGTTTATTTGATTGAAGTCAAGATTGTCATTTAATATATA AAATAGATATATATTTTGATATTCTATGCAGGACTTAAAATATGGTGCAGCAGCTTCCATCCAAATCTGTCCACTTATAG ACAAAATGGACTTTTTTTGGGGGAGGGGTGTTTCATTTCATCACTTTATAAAGTAACATACGGAGAAAGATAGGTTGCTT TACGGTCATTGCACACAATTCCATTCAACCATACAAATCATGAATTTTATATGTTATGAGTGCCATGCCAGTAATATCTT TGACGAGCTTACTTTGAGTGCTCTTATAAGCCATGTTTAGTAAAACATCTTTGTAAAATACACAAATGAACTGATATCAT GAGACCTCTATTCATCGTTTTAAGTAACAACTAATGGTAACATTGCCTCAGTTAGGTCCTACTGCAGCTACTTTGGTTGA CCTTGCATGTAATAAAAGATCACTTTTCTGATTTAAGGAAACTTTATATATTTTGGTGTGTGCCCATGCTGATATTTTTG TTATCCCACTTTTCCTTCTTTCTAACTTGATTACTATTCATGTTGTTAAGTTTTCTTCAATTTGAGTGTAAATTTCAATT AACAAAAGAATTTTTGTTATATAAATACCTACAAAGTCTGCCCATGTAAATAGCTACCAAAGCACGAAATGCTCTTGTTT GTTTGAAGAACAATGAAAGTATTTTATCTAAGAATAAATGCTTTGTGCTGTGCAGATGAGTTTATATGAAGATCTGGTTG CTGCCTGGGTACCTGCAAAGCATGAATGGTTGAGAAAGCGCCCTTTGGGTGAAGAACTAGTTAATAAATTGGGAAAGCAT AAGATGTTCAGCTACTGTGCCTGTATGTCAAGCTCAATTGCAATCTTCTCTCTGTATCTGCAATTCTGCACAGTCCTCTA TCTATCTGTACAAACATTGATTCTCTCATATATTATGCCATTGCAGATGATTTGTTGTTCTTGCATTTTGGGACCTCAAG TGAAGTACTAGATCACCTCAGTGGCGCGGGTTCAGAATTGGTTGGTAGAAGACACATGTGTTCTATTCCAGCTACCACTG CATCTGACATTACAGCATCTGCTATTATTCTTTCTAGTGAAATTGCACCTGGTGTCTCAATTGGGGAAGATTCTCTCATA TATGATTCGTCTATTTCTGCTGGAATACATATTGGCTCCCTGTGTATAGTGGTCGGAGTCAACATCTCTCTAGATGACTA TATATGCACTGAAGATTCAATCAAGTTTATGCTTCCAGATCGCCATTGTCTTTGGGAGGTTCCCTTGGTTGGAAGTAGTG AGCGAGTTCTTGTATATTCTGGTCTTCATGATAACCCCAAAAGTTCTCTTTCTAAAGATGGTACGTTTTGTGGGAAACCC TGGAAGAAAGTTTTGAATGACTTGGGCATTCAAGAAAGTGACTTGTGGGGGTCCTCAGGCACCCATGAAAAGTGTTTATG GAATTCAAGAATCTTCCCCATACTTCCTTATGCTCAAATGCTTAAGGTTGCAATGTGGCTGGTGGGCTTAGCTAAACATA AAAGTGAATACTTTTCTTTGTGGATATCTGCCCCGCGCATCAGTCTGGAGGAATTGCATAGATCAATTGATTTCTCCACA ATGTGCATAGGTTCACGTAATCATCAAGCTGATCTCGCAGCAGGAATTGCAAAAGCATGCATTAGGTATGGAATGCTGGG GCGCAATTTGTCTCAACTATGTGAAGAAATTCTTCAAAAGGAGGGTTCTGGAGTTGAAATATGTAAGGATTTCCTAGCTA TGTGTCCAAAAGTTCAGGAGGAAAACTCTAATATACTTCCCGAGAGCAGAGCATACCAGGTGCAAGTTGATCTTCTTCGA GCTTGCAATGACGAAGCGACAGCATGCGAGTTGGAGCACAAAGTTTGGGCTGCGGTGGCTGATGAAACTGCTTCAGCAGT AAGATATGGCTTTAAAGGTACATGCTTTAATCATGGTCATGCCCCAAGATGCCATCTTCATGAAAAAACAAATTGCAAAC AGTTCAGTGCTGCTGGCATTTTTTTTTAAGGTGTGGTGGTGACTATTGAAAGAATTAACTTTAAGGTTGAGCGATTGAAA ACCAAAGTTTTCTGTGAAGATAAATTATTGAGATATTATAGCATCTCTATGTGATTGATGGTGGGTAGTATTAGTTTCTC ATAGTATTATCTCTCTATAATCAACTCTCAAAATACAGACTTAGAAAAAGAGTTATCTATGATTAACGATTAACGCCATT TAGAATTCATTTGACCTCAAGAGTAGTTACAACTAGCTATCTAAGTGTTTTGTTTTTAAATCTTACATATCACATTCTCC ATTCCTATATTTGAAGGAATGGACAATTGCTTCTAAATATTCATGTAAAAAATTAGAGAACTGATTTTCTTATAGCTGAA TTCGTTCTCTTTCTGTAGAACATTTATCAGAGTCTCCTGGTAGCCTCTCATGTCAGGAGTACCAAAGTAACCGTCATGAT GGGCGCACTCGTCAACCTCTCCATCCTAAAAGAGTAAAAGTAGAATTACCAGTTCGCGTAGATTTTGTTGGTGGTTGGAG TGATACCCCTCCATGGAGCATTGAACGTGCTGGGTGTGTTCTCAACATGGCAATAAGCTTGGAAGGTTCTCTTCCAATTG GCACCATCATAGAGACGGCTGAAACAACAGGAGTATTAATTACTGATGACACAGACAACCATTTATACATTGAAGATTAT AAATCTATATGTACACCATTCAATGGCGATGATCTATTTCGGCTTGTCAAATCCGCATTACTTGTGACTGGCATTATTCA TGATAACATCCTTGCAGATATGGGCATGCACATTAAGACATGGGCTAATGTTCCCCGTGGTAGTGGATTGGGTACTTCTA GTATTTTAGCTGCAGCTGTGGTGAAAGGGCTTCTTCAGATAATTGATGGAGATGACAGCACTGAGAATGTTGCGAGACTT GTTTTGGTGTTAGAACAACTCATGGGGACAGGAGGTGGCTGGCAAGACCAAATTGGGGGTTTGTATCCAGGGATTAAATG TACTTCAAGCTTTCCTGGAATTCCATTGCGGCTTCAAGTGGTCCCCCTGTTGGCTTCACCAGAGTTGATTTCTGAATTGC AGCAACGGCTTCTTGTGGTATTTACCGGTCAAGTAAGTATTTGTTTGTTCATATGAAAATGCATTTTGCGTTCCTCCATG CACCACCAATTATTGCCTAAAAGCTTGTAGTGTACGCTTTGGATCAACATTATTTTTCCTCATAATCAATTTTACACCGC CACGCACCAAAGTTTCTCCTCATAATTGAATTTGGCTTTAGAATCAACTGTAGAAATATTTCCAAATATGCACAAGGACA GGAATTAAAGCTCCTGGGGAAAAGCTTCAATATTGGACAAATCGCAAATTAGCAATAGTTTCCAGATTAAAATTTCAGGA GATATGTTGTTCACGTTTTGTTTTGAATTTTTGTTTCTTTTTTAACATATATAATTACACATCTTATTTAATGTTGTCAT TTTGAAGCTAGTGCGGCCATTCACTAAATTCAACATCCTATATTACTAACTTTGATTTTGGATTTACATGGAAATGTTTT GCAGGTTCGGCTTGCAAAGAAGGTGCTGCAAAAGGTGGTAACTAGATATATTCGGCGGGATAATCTTTTGGTATCAAGTA TCAAGCGCCTTGTTGAGCTGGCAAAGATTGGGAGAGAAGCTTTGATGAACTGTGAGATTGATGAATTTGGGGAGATAATG TTGGAAGCTTGGAGATTGCATCAGGAACTTGACCCTTTCTGCAGTAATGAGTCTGTTGACAGGCTATTTTCTTTTGCTAG TCCCTACTGCTGTGGTTACAAACTGGTTGGTGCTGGTGGCGGAGGCTTTGCCCTCTTACTTGCCAGAGACAAACAGCGAG CCAAGGAACTCAGACAGAGGCTACAAGATGAGAAACATCTTGAAGTCAAAATCTATGATTGGCATATATCTCTATAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0794600.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAAGAAGGGCGAAACAGAAGGAGGACTTGACCTCCCTTCTTCGCAAATCATGGTACCATCTCAGGTTATCTGTCCG TCACCCATCTAGGGTTCCGACATGGGATGCCATCGTCCTCACCGCCGCTAGCCCCGATCAAGCTCACCTCTACACCTGGC AGCTCAACCGGGCCAAGCGCTTGGGTCGGATCGCCCCATCCACTGTCACCCTCGCCGTCCCCGACCCTCTTGGTTGCCGC ATCGGCTCCGGCGCTGCCACCCTCAATGCCATTCACGCCCTCGCTCTCCATTACCACACCACCACCCAGTTGCTGGCCAA TAAGCATATACTATTGCTCCATGCTGGAGGTGATTCTAAAAGAGTGCCTTGGGCTAATCCTATGGGGAAAGTGTTTCTTC CTCTTCCCTACTTGGCATCAGATGAGCCTGATGGCCCAGTTCCCCTGCTCTTTGATCACATACTTGCCATTGCTTCTTGT GCAAGACAAGCTTTTGGGGATCAAGGTGGAATGTTGACCATGACTGGTGATGTTCTTCCATGTTTTGACGCCTCTGTGAT GATTCTTCCTAATGACACTTCGTGCATCATCACCGTTCCGATCACCCTTGATGTTGCTTCAAACCATGGAGTTATTGTTG CAGCTGAAACTGAACGTTCAACTAAGAGTTATGCAGTCAGTTTAGTAGATAATCTCCTCCAGAAACCTACTTTAGAAGAG CTAGTTGAAAATAAGGCTGTTCTAGCTGATGGTAGAACACTTCTTGATACCGGAATAATAGCAGTTAGAGGTAAGGCATG GTTGGAGCTTGTTACACTTGCATGTTCCTGTCAGCCAATGATTTCAGAGCTCCTAGAAAGCAAAAAGGAGATGAGTTTAT ATGAAGATCTGGTTGCTGCCTGGGTACCTGCAAAGCATGAATGGTTGAGAAAGCGCCCTTTGGGTGAAGAACTAGTTAAT AAATTGGGAAAGCATAAGATGTTCAGCTACTGTGCCTATGATTTGTTGTTCTTGCATTTTGGGACCTCAAGTGAAGTACT AGATCACCTCAGTGGCGCGGGTTCAGAATTGGTTGGTAGAAGACACATGTGTTCTATTCCAGCTACCACTGCATCTGACA TTACAGCATCTGCTATTATTCTTTCTAGTGAAATTGCACCTGGTGTCTCAATTGGGGAAGATTCTCTCATATATGATTCG TCTATTTCTGCTGGAATACATATTGGCTCCCTGTGTATAGTGGTCGGAGTCAACATCTCTCTAGATGACTATATATGCAC TGAAGATTCAATCAAGTTTATGCTTCCAGATCGCCATTGTCTTTGGGAGGTTCCCTTGGTTGGAAGTAGTGAGCGAGTTC TTGTATATTCTGGTCTTCATGATAACCCCAAAAGTTCTCTTTCTAAAGATGGTACGTTTTGTGGGAAACCCTGGAAGAAA GTTTTGAATGACTTGGGCATTCAAGAAAGTGACTTGTGGGGGTCCTCAGGCACCCATGAAAAGTGTTTATGGAATTCAAG AATCTTCCCCATACTTCCTTATGCTCAAATGCTTAAGGTTGCAATGTGGCTGGTGGGCTTAGCTAAACATAAAAGTGAAT ACTTTTCTTTGTGGATATCTGCCCCGCGCATCAGTCTGGAGGAATTGCATAGATCAATTGATTTCTCCACAATGTGCATA GGTTCACGTAATCATCAAGCTGATCTCGCAGCAGGAATTGCAAAAGCATGCATTAGGTATGGAATGCTGGGGCGCAATTT GTCTCAACTATGTGAAGAAATTCTTCAAAAGGAGGGTTCTGGAGTTGAAATATGTAAGGATTTCCTAGCTATGTGTCCAA AAGTTCAGGAGGAAAACTCTAATATACTTCCCGAGAGCAGAGCATACCAGGTGCAAGTTGATCTTCTTCGAGCTTGCAAT GACGAAGCGACAGCATGCGAGTTGGAGCACAAAGTTTGGGCTGCGGTGGCTGATGAAACTGCTTCAGCAGTAAGATATGG CTTTAAAGAACATTTATCAGAGTCTCCTGGTAGCCTCTCATGTCAGGAGTACCAAAGTAACCGTCATGATGGGCGCACTC GTCAACCTCTCCATCCTAAAAGAGTAAAAGTAGAATTACCAGTTCGCGTAGATTTTGTTGGTGGTTGGAGTGATACCCCT CCATGGAGCATTGAACGTGCTGGGTGTGTTCTCAACATGGCAATAAGCTTGGAAGGTTCTCTTCCAATTGGCACCATCAT AGAGACGGCTGAAACAACAGGAGTATTAATTACTGATGACACAGACAACCATTTATACATTGAAGATTATAAATCTATAT GTACACCATTCAATGGCGATGATCTATTTCGGCTTGTCAAATCCGCATTACTTGTGACTGGCATTATTCATGATAACATC CTTGCAGATATGGGCATGCACATTAAGACATGGGCTAATGTTCCCCGTGGTAGTGGATTGGGTACTTCTAGTATTTTAGC TGCAGCTGTGGTGAAAGGGCTTCTTCAGATAATTGATGGAGATGACAGCACTGAGAATGTTGCGAGACTTGTTTTGGTGT TAGAACAACTCATGGGGACAGGAGGTGGCTGGCAAGACCAAATTGGGGGTTTGTATCCAGGGATTAAATGTACTTCAAGC TTTCCTGGAATTCCATTGCGGCTTCAAGTGGTCCCCCTGTTGGCTTCACCAGAGTTGATTTCTGAATTGCAGCAACGGCT TCTTGTGGTATTTACCGGTCAAGTTCGGCTTGCAAAGAAGGTGCTGCAAAAGGTGGTAACTAGATATATTCGGCGGGATA ATCTTTTGGTATCAAGTATCAAGCGCCTTGTTGAGCTGGCAAAGATTGGGAGAGAAGCTTTGATGAACTGTGAGATTGAT GAATTTGGGGAGATAATGTTGGAAGCTTGGAGATTGCATCAGGAACTTGACCCTTTCTGCAGTAATGAGTCTGTTGACAG GCTATTTTCTTTTGCTAGTCCCTACTGCTGTGGTTACAAACTGGTTGGTGCTGGTGGCGGAGGCTTTGCCCTCTTACTTG CCAGAGACAAACAGCGAGCCAAGGAACTCAGACAGAGGCTACAAGATGAGAAACATCTTGAAGTCAAAATCTATGATTGG CATATATCTCTATAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0794600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MERRAKQKEDLTSLLRKSWYHLRLSVRHPSRVPTWDAIVLTAASPDQAHLYTWQLNRAKRLGRIAPSTVTLAVPDPLGCR IGSGAATLNAIHALALHYHTTTQLLANKHILLLHAGGDSKRVPWANPMGKVFLPLPYLASDEPDGPVPLLFDHILAIASC ARQAFGDQGGMLTMTGDVLPCFDASVMILPNDTSCIITVPITLDVASNHGVIVAAETERSTKSYAVSLVDNLLQKPTLEE LVENKAVLADGRTLLDTGIIAVRGKAWLELVTLACSCQPMISELLESKKEMSLYEDLVAAWVPAKHEWLRKRPLGEELVN KLGKHKMFSYCAYDLLFLHFGTSSEVLDHLSGAGSELVGRRHMCSIPATTASDITASAIILSSEIAPGVSIGEDSLIYDS SISAGIHIGSLCIVVGVNISLDDYICTEDSIKFMLPDRHCLWEVPLVGSSERVLVYSGLHDNPKSSLSKDGTFCGKPWKK VLNDLGIQESDLWGSSGTHEKCLWNSRIFPILPYAQMLKVAMWLVGLAKHKSEYFSLWISAPRISLEELHRSIDFSTMCI GSRNHQADLAAGIAKACIRYGMLGRNLSQLCEEILQKEGSGVEICKDFLAMCPKVQEENSNILPESRAYQVQVDLLRACN DEATACELEHKVWAAVADETASAVRYGFKEHLSESPGSLSCQEYQSNRHDGRTRQPLHPKRVKVELPVRVDFVGGWSDTP PWSIERAGCVLNMAISLEGSLPIGTIIETAETTGVLITDDTDNHLYIEDYKSICTPFNGDDLFRLVKSALLVTGIIHDNI LADMGMHIKTWANVPRGSGLGTSSILAAAVVKGLLQIIDGDDSTENVARLVLVLEQLMGTGGGWQDQIGGLYPGIKCTSS FPGIPLRLQVVPLLASPELISELQQRLLVVFTGQVRLAKKVLQKVVTRYIRRDNLLVSSIKRLVELAKIGREALMNCEID EFGEIMLEAWRLHQELDPFCSNESVDRLFSFASPYCCGYKLVGAGGGGFALLLARDKQRAKELRQRLQDEKHLEVKIYDW HISL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR32463
25 1043 1019 0.0 –
Pfam
PF07959
115 512 398 4.8E-116
IPR012887
MobiDBLite
mobidb-lite
675 695 21 - –
SUPERFAMILY
SSF54211
700 883 184 4.48E-22
IPR020568
Gene3D
G3DSA:3.30.230.120
701 1042 342 3.0E-90 –
Pfam
PF00288
807 869 63 1.1E-8
IPR006204
PRINTS
PR00959
812 834 23 3.0E-8 –
SUPERFAMILY
SSF55060
902 1030 129 2.4E-22
IPR036554
Pfam
PF08544
954 1029 76 8.5E-8
IPR013750
PRINTS
PR00959
998 1015 18 3.0E-8 –
Coils
Coil
1010 1033 24 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0016772
Molecular function Transferase activity, transferring phosphorus-containing groups Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0794600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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