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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0189700 |
| Transcript ID | LotjaGi2g1v0189700.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing family protein; TAIR: AT1G12700.1 RNA processing FACTOR; Swiss-Prot: sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial; TrEMBL-Plants: tr|A0A1J7IP46|A0A1J7IP46_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0189700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:62000259..62009650) extracted from Lotus japonicus Gifu genome v1.2.
GACCGCGGAACGAACGATAAGTCTTATGGCGGTTGGATGTGGTGACGAAAATAAAATAAAATTGAGAAGTGATAAAAAAC TGGCTTGAGCGTCGTCGTTTTTGCTGGTCTCACCATCTCAAATGCTCAACACGCCGTCCCTCCCTACCCTGGTTTGTAAA ACGAATGGAGCATGTTGCCGTCGTTCGGAGCAGCGCGTCACCGAAACATGAACACCATACTCCGCCATAGTCAAACCCGT TGCATCCCCACCTTCCTCACCCTTCTCCTCTATTCCCCTCGTCCAATCTCCACCTCCACCACCACCACCACCCCCGCCGC CGCAGTTTCCTCATTCCACCGCATGCTCAACTCGCACCCTCCCCCACGCATCCTCGAGTTCAACAAGCTCCTAACCACCC TCGTCAAATCAAAGCATTACCCCACCGCCATCTCACTCTGTTCCAAAATGGAGCTCAGAGGAATCACCCCTTGTGTCATC ACCCTCACCATCTTGATCACGTGCTTCTGTCACGTGGGTCGCGTGGCCCTCGCGTTCTCCGTGCTCGGGAAGATTCTCAA ACGGGGGTATTATCCATTTGATGCTGTGACCTTGAACGCGCTCATCAAAGGGATTTGTGTGAGTTGTGGGGTTTTGAGAG CGGTGAAGGTTCATGATGAACTGTTTTCGAAAGGGTTTCGGTTCAATGAGGTTACTTATGGGATTTTGATTGATGGGTTC TGTGAAGCGGGGCGAATAAGGGAAGCTATTGCGGTTCTGAGGGCAATAGAGACATGGGGTAGGGATGATTTAAGGCCTAA TGTTGTTATGTATAGCACCATTATTAATGGTTTGTGTAGAGATGGGTTTGTGAATGCGGCATGGGATTTGTATCGTGAAA TGGTTGCGAACAAGGTTTCTCCGAATGGTTTCACTTATGGGTCTTTGATTCATGGGTTGTGTGGTGCGGGGCGGCTGGAA GAAGCTATTGAATTGCTGGATGAGATGTTGCGGGAGGGCATACGCGTAAGTGTTCATATCGTCACTGTTTTGGTTGATGC ATTGTGTAAAAACGGGAGGGTGCTTGACGCACGGTATCTGTTTGATGAAATGATTCAAAGAGGTTATGAACCTAACATTG TTACTTTCACCGCTTTGATGCGCGGGTATTGTTTAAATAATGACGTGGATGAGGCAAGAAAGCTGTTTGATAAGGCTGTT CGGTGGGGTATTGTGCCTGATGTTCAGATTTTTACCGTCTTGATCGATGGATATTGCAAGGTTGAAAGATTAGGTGATGT GAAGAATCTCTTATGCGAAATGTACCGCAGGAACTTGGTTCCGAACCTTGTGACTTGGAATTCTCTGATTAATTGCTTTT GCAAATTGGAAGGAGTCTTGAGTGCTCGGGAGGTTCTTAAGGAAATGAATGCTAGAGGTCTGTCCCCTGATATTTTCACT TATACTACCTTATTAGATGCTTTATGCAAAAGCAAACATCTTGATACGGCGATAACATTATTCAACCAACTGATTAAAAG GGGTTTCTCACCTGATGTTTGGAGTTACACCATCATGATTAATGGATATTGCAAGAGTGAAAGGATAGATGATGCCATGA ATCTTTACAAAAAAATGCTTCAAAAACATTTGGTTCCTCATATTGTAACTTACACTTCTCTCATTGATGGCTTGTGCAGA TCTGGGGGAATCTCAGCTGCGTGGGAGCTTCTCAATAAGATGCACCATAATGGTCTGCCCCCTGATAATATCACGTACAG TATCTTGTTAGATGCTTTATGCAAAAGTGAACGTCTTGAACAGGCAATTTCATTGTTTAACCAAATGATCGAAAGGGGTT TGGCACCTGATGTTCGGAGTTATACCATCATGATTCATGGATATTGCAAGAGTGAAAGGATAGATGAAGCCATGAATCTT TTCAACGAAATGCTTCAAAAAAAATTGGTTCCTGATACAGTAACTTACATTTGTCTTGTTGATGGCTTGTGCAAATCTGG GAGAATCCCATATGCACGGCACCTTGTTAATGTGATGTATAACGATCGTCCACCCCCTGATGTTATCAATCACCTAGACG CACATCACACCAGTCATTACCTTGTTTCAGCGCATTGTTGAGGCTGACAGAGGAACTGCACTTAGCACCAGTCATTATGA GTATAGATAACTGTGCTTGCTGACAGTTTGTATGAAGTTGGAAACTGCATGTGATTTTCCAAACATCTTTTGATTAAAGG ATGTTGTCCTGTCCAGAAGTCCAAAAATTTGCCACCATTATCAACGGAGTCTGACAATAGAGATTGTTTTGATCAAGCAG TGGACCGGCTTTAAAAGGTCGGGAATAAAACGGTTGCTTCTGAAAGGGTATAACTTTTGGATAAAGTAAATCTTGCTATT CTGAAAATCAAAACAAGACTGAAAAGTGGAGAAACTTCTTCATGAAGTTGTTGTCAGAGGTCATGTAAGATGATAAAATG AGGTCAGTTTCTTTAGTTTTCATTTCAATTCTACTTATTTATGTTGGATTTGTTTGAATGTTTCGCAAATGTTTCTTTCC TTGGGTCAGATAAATTGGACCACAATGGTCTGACTATTATAGATGTGTGCTATTGACTTTTAGACTTTTAGTTGTTGCCA GTGGTTAACTTTGTAAATTTTGACATGACATTGATCTGTCTTCATTTGTTATGTATCACTCTTATACCTATGATTAATGT TTCTGCAATCAGAATAGAATGTAAATAACCTTTGTGTATCCTATAATTAAGTAATTAACCTATTTAATAATTCAACTAAC CAAGTGGAGTTTATTTTGCTTTTTTGTCTATTTTTTTCCAGCATATTTAATTTTTTCTTTACGTACTAGTTACTACCACT AAACTGGTTAAAACAGATGATTTTTATTGCAGTGGGCTGAACCTCATTAACCTGGACATTTACCACCCGGCCGGATTCCA CTCTTCAGTGCTGACTGGCTATGGAGCCTAAGACTCTCTTACGGTGCTAGAAGCTGAAAAACACAGTTAGATGAGGTGAA AAATCTGTTATTTTAGCTTTTAAACCCAATTCTTGTTTAATGTTTATGAAAAGAATAGGGGTCCATTTTGCAGGCACTCA CCATGAAGCCATTGAATAACTCATCAAAGCAGCTCATGTTGACAAGGGCTACCTAGTCTTTCCCTACCACCCCAATTCCA AATTTCTTGCAAAATCACAAGCTATTAATTATGCTCTATTCTACTCAAGTCCACAGGTAACGTTAAGTTAGCATTGGACT CCAACCTTAATAGGTTCTTTTATCTGTTTAGTTTCCTTTTGTGATTTATCTCTGAAGATATTTATTCTCACTTTTACTGA AAGTGGCTAACACTATATACTAGTCAGTTGGTGTAGATTAAAGCAGTGACGGATCCAAAAAATTAAAGTTGTATGAATGC ATCCGTCACAATATGAATGCATCCGCCCCTGGATTCAAGGGTGAAATTTTTTGTTAAATAATAGTTATGGGAAACAGGCA TCAATTTTTTTTTCTAAAATTCCATGTTGGCAAGAATAGAGTGTCATTACTATAGCATGTACTTTCTAGTGAAAACTTGA CTTTTCTTTCTTTAGCCTCTTCTTAATCTTTTAATATTACCTCCATTTCATATTAATTGTAGAAGAAATAAAAAACTGTT TATATATATGTCCACTTAGAATTTCAAGAGAGCATTAATTGATGTTTTTCCAAATAATGCCCTTATGAGAAGAATAAATG AGAAGAGATAAAACACATTTGAAACGGTAAAATAGGAAAACAAATAATATTTTCTGAAAGTTAACAAAATTAGTTGCATT TCTTAATATGTGTGGTATTTTTCTTTCTCTTAATATGAAACAAAGGTAAATAGTATGTTTGAATTTGTACATCGCTGCTT TATTTTGGAAAAAGAGCTTACAGTGCTTTATGTGTATTAATTACAGCTTGAGCCTCATGTTCAGGAGAAAGGACTGGGAA AGTTTCTAATGCGACTTTATTAAGCTTACGTCTCAAAAGGTGCTACATTGTTTTTCTCATCTTCCTCTCTGTCATTGATG AAAATAGAGAATTGGTGCAAAAGGGCACAGCTTGTAATCAGGGAAAAGACTCTGTACTGTTGAACGTTACAATCTTTTAA GTTTATAAATGATTAGTTTATAGTCTTCTTTTTTGAAAATTATTATTCTTGACAAGCATATGAATTTTTTGTGCATCGAG TACGGTTTCTGATCTAATTTTTGTTTGTTTTAATATCTGTTGTAGAAGAGCTGCATTGGTGCTTGCTATCATGCTAGCTG TTCAAAAGGAAAACTTACCAGATATGAATTTCAACATTAGTAAGCTGAGGTAATATTTTCAATCATGTATGTCATCATTG AAATATTATCCATTTATCCTATATAAAGACTACATATCAAGTTTGATAAGAATGAAATAGAATTTTTTTTTCCTATGACC CCTTGCTCCTGTTAGCCTTATTAATTGTGTTTCAACCTCAAGGCATTGCGTAAATATATTTCTGTCTGCTTTTGGGCAGG CATACCTGAGGTAAAACAAGACCGATATTTCTACTTCCTAGTCTTATTGCATATTGGCTTTCTGATACAGGTCGTCTGGA GGGAAATTTTTTTTTGTCAATAAATCTTGATGGAATGTGTAACCGAATGCATTAATATATATTAAAAAAGGATTAAACTT AAGTACAGTACTATAGTTGCTGTTATTACTGTTCTCCAATGAAAAATTGACACATGTTAATTTATTCCTAGTCACTAACT CCGTTGACGTTAAAAGAAATCCTTGTTCCTGTTTGCCCAAAAAAACATCCCCATCATGTTATCGACTCTGATTCTTCTCC CCTCTATCAAATCCCCCACCTGCACCCCTCAATTACTCACGTTCGTCTGCACCCTTTTAACTTCGCTTCATCAATTTTGT GTTTTCTTTTGAGAGAGAAAGAGAGAGAGAGGGAGAGAAGAGGATTAATGGGATGCAAGTGTTCTGCTTGTGCGCCAGGT TCAAGGGTTTCGTGGTGTCTTCTGGTGCGACGGTGGTGGAGGAAACCATAGCCGTCAGCGGTGGCTTTTATTCACCGGGG CGATGGTGGCGGAGGTCGACTTTCTAACGGCATGAGCGACGGTGGTGTGCATCGAAGATTCATGGGCGTGGGCAGAGGAG ATGATGATGAAGACCGAGGGAGAGAATCGATTTGTTTCGCAGGTGCTTCCAACCAGGTCCTTGGTGTTCACGATCTGTAT CGGCAATGGAGTATAAGATTGTTCCAGAACTGATTTTTTTTTTCCTTTGCAGATATGGAGGAAAAACTATGGTGCATTGG AGGAGAGGGAGACAGAGTGAGCAGTTAACTGAGAGTTAACGGAGGTAGTGAGAGTAAAATAACCCACATGTCATACTCTC ATTGGAGAACAGTAGTAACAGCACTTATAGTACTGTACTCAAGTTTTACCCATTAAAAAAACTGAAAAAAACGAGCCGAA AGCCAGAACTTGATATATTTTTTCAAGGAGAGGGTCAGTCACTCATTCTAAGTTTTAAGATCTACATACATATAGTAGAC TGCTATATAAGGGTATGTTTTCTCATGTAATGACATGCTTATTTGCGCAAATCCTGGACTTATCAATCACTTATATGATT TTAATTTCTAAATATATAGTGATAATCTTTGTTAGCTTGTTTGCTATCATGATTAAACATTTTTTTTTTGAAATGGCTTT CATGATTAAACATAAAGTAGGAACAATGTGGTCATTACAGTGCTTCCTATATCTATTAGTAAAAAGTTAAGGATATTTGC AGGTCATGCCACTGTTTTGAAGAGTGGTTATATAGGTAAGAGTTTATCCCTGTCCTAGCTATAGAACCAATGCAGTTAGA GTTAGCTCAAGGTCTGTTAGAGCCAGTTAGTTAGTTGGGCGGGTAACTGTCTCCTATGTGCAATCCTATGTGGTGGATGC GATTAGAGATAACTCAAGTCTGTTAGAGTCAGTTAGTTACTTGGGCGGGTAACCGTCTCCTATGTGCAATCCTACGCGGT GGTTAAATTGAAATGCTAGTGTGAGAAAGCCTTTACAAACAAGTAGCTAGTAGCTACAATGAACTCCTATATCAGGATCA ATTTTATTTATGATATTAAACACAGGGATATTGAATAAATGCAGAATTACTTGTAATGTCTTTGCTTTTGAATCACCAAT GAGGGGGTATGCTTCCTCCCAAAAAAAACAACGAGCATATCTTTGTTTGGCTTCCCTATTCGTTCTCTCGTAAAAAGTAA AGGAGAAATACTAATGCTGATCCAGATTGTCAAACTAATCACGTTCACGGAATTCTGCTACCATATGCTTGCCTAAAACC TCGTTTGAAAATAGCACCACGGGAACTCAAATCTCTTGGATGAAATGCCTCTTGTAACATTTTGAATCATCTACAATTTG CTGCTACCTTGATGTCAGCTTTGAACATTGCTCGTACAGGTCTATGATCCGAAAGCTTTGACTCACTCCTGCAGTATTGT GTTTGCTTCATTCCCTTTCCAAACCATATTATTCGATCACACCTGCAGTACCTTCTTGTGGTTAGAGTATCCCCTACTTG CTAATGGCTCATATGTAAACATTTGAAGTTGGATTTTTTATCATCTGTTTTCCTTAAAGATAATAACATTTCTAGTAGAG TATCCCCTACTTGCACAAGTAATGATTTTTCCATGTCTCCTTACCATGCAGGGGCACGTCTCTTTTTGCTCATGTGTTGC TGGTCACAACCTATGTAATCTTTAGAGTTCGGGTGGTACTTGTATGTAGGTGGAAACTCTATCGCTCCTTCATGCCAACC TCGGAATACATGGCCTTCCGTGAGCTCCTTCTTTAGCTATATATAATTTGCAAAGTATTATACCTTGAACTCCGAAAAAT ATGGTAACTAACTAATTAAACCAAAACTATTGCAATGCAAACCTGGTCTTGTTTCAACAAGGTTTCCCACTCTCTTCTCT TGATCAATGACTGTGTTTCAGAGTCTGGCATATAGATCCTGTAGTTCAAGTCGCCTAGCCAGACAACTCGGCTGCATGTG ACAGATACCCATTTCAGATGGAGTTCTATTGTATGTATTCAACTTGTGTAGTGTTTTATATAGTCGTAGTTTCCAATTAT GCACAATTGAATACACTTACTCATGGTCAATAATTTTTCGAGGCATGTCATGCAGAGTATCAGTAGAGAATCTTGTCCGC GACAAAATATCAGTTGCGTTAACGTTTCTCTGTCTTCGGTCTTCTTCTTTACCACCAGAAGCTAGATGACTGCATATAAA GCAGAAGCTTGTTTCATGCAAGCAAAATCTAATTGATATTGAACCCTGTATTTTAAAGATAAACAGAATGTTTAAAAATT CATTTACAATTTCAAAACTATCTGAATTCGCCGTTTAAAAAATAAACTGAAAATATGCGTTTGCACTTCTCTATAATGTG TGAAAACTTACCTTGTTTCCCAAACAACCCATGATTCCACAGCCAACAGATGAGACACTCAAGTGTCGGATAGATTGTAA GAGGTAAGACTGAACCCAAATGGTAATGAACACTCCCACCATTTGCTTGCTTCTGATGCACTGGAAATCTTGTTCATGCT CACCCTCTGCACAAATTTGTTTCTGCAGAGGGTATATCTTATGAGGTTCTGCTATTTTATCTTCTTCAACTCCCTTTATT GGTCTTCTATTGTTAAGGGCTGCCCCAATAAGAGAATTCCATTTCCTAGAATTTCTTCTGTTTCGGGGACATAGTATATT TGCTGCATTTAGAGGTACAATTTCTTGGAACCTGATATAACACAGATGTTTATGACATCAGATACTGGTCAATGAATGAA GTGAGATGGATCCAATAATTTAGAGTATATTAACATGTTTAGATCAACCATTTTCTCATAATCAATTATGGAAGCTACTC CCACAAACTTCTTCACATAATTGATTCTAGCTTCAGAAACAATTGTGGAAGAGTCTCAAACATGCACTTGAAAGTTGATT CTCACGTGTAATCCAAGTAATAGGAGAGTATTACCCTAGAACATAAATGTCTGCACAATTATTTCCTGCATCAAGCCAGT CTTCCATGTCCAAATTATTGGGTGGTTCAATGCCTCCAATATTCCAGGAACCAACAAATATCCTTGTGCAGAATAACATC CAAATCAGAGTTGCTTTTGAGATATAAGACAAAGCCAGAACAGATCAAAGTGATATAGAACAATTGTTTAAGAATGTCCA CTGTTAGGGCTCCCTTACCTTTTGGTTTGATGATAGAAGCATCTTCTTGCGTTTGCATATGCTTGATTCATACTAGAAGT TTCCTGCTTGGCATCTGATGAATTCTGGTTTCCCTCTTTGAAGTTACCAATGCTTAACATCTTTCTTAGGATCTTGCTTT CGTTCAGCTTGAAGCTCTGCATGATCTTTAGACAAAATATATAGTCATCAAGCATATAGAAAAAAAACACTTGAAATTAG AAAGACAGTGGAAGGGATACCCTACTTCTTGCACTCTTGGTCGCCAATGGTTTTCTTTACAGTGTAGAAGTGGCATGCCA AAGCTGAGAAAAGCTAGAAAAGAAAGGAACTCCGCATCAAGAGAATGGGTTAAGGGGGGAGGGGAAGGGGATTTATAAGC AGGCAGCTAGTTGAGTGCCATGATTGAGTTGATTAATAATTGGTTAAGGACAAGTAGCCATCAAGGGGACAACAGAAGAA ACCTGGAATCTCATGTGAATGTTTTGCCTCAACTTGATTGCATATATTTGTGTTTTCCCCTTTTTTTATTTAGCTCATAT TGAAAGCGACTGATTCTAGTTTTAATTTTCATTGTTTTCTATTGTTCAATTAATACCTTTTTTTCCTCAAAATGCTTTTT TGTTAAATAAGTGATTGTATGGGTGATGTATTTAGTGAAAGCTCTTTTATGAGAGAATGAAAGAAGTGAGTTTTGACCAT TGGACTATTCATCTATACTTAAATAATTAAGATTTAAAATTATTTAATAGTCACAAAAATAAGATATTCTTTCATCCAAA TTCCTACTATCTCCGTTCCTATTTAACTGTTTAAAGAGATAAGAAACACACATATTAAATAAAGCAATTAATTTTGTTAA TTTTCAGGAAAGTAGTATTTATTTTCCTATTTCACCCTTTAGAATGTATTATATCTTTCCTCATTTATTGTTACTGCAAG GGTATTTCTTAGAGCATTTTTAATGCAAATTCTTAATTTGTAATTCTTAGCACTATTCATGTGAGCTTGTACTGCCACAT GTGCTCTAAGTAACTCTCAAACAACTTTTGCA
CDS sequence (LotjaGi2g1v0189700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGCCGTCGTTCGGAGCAGCGCGTCACCGAAACATGAACACCATACTCCGCCATAGTCAAACCCGTTGCATCCCCAC CTTCCTCACCCTTCTCCTCTATTCCCCTCGTCCAATCTCCACCTCCACCACCACCACCACCCCCGCCGCCGCAGTTTCCT CATTCCACCGCATGCTCAACTCGCACCCTCCCCCACGCATCCTCGAGTTCAACAAGCTCCTAACCACCCTCGTCAAATCA AAGCATTACCCCACCGCCATCTCACTCTGTTCCAAAATGGAGCTCAGAGGAATCACCCCTTGTGTCATCACCCTCACCAT CTTGATCACGTGCTTCTGTCACGTGGGTCGCGTGGCCCTCGCGTTCTCCGTGCTCGGGAAGATTCTCAAACGGGGGTATT ATCCATTTGATGCTGTGACCTTGAACGCGCTCATCAAAGGGATTTGTGTGAGTTGTGGGGTTTTGAGAGCGGTGAAGGTT CATGATGAACTGTTTTCGAAAGGGTTTCGGTTCAATGAGGTTACTTATGGGATTTTGATTGATGGGTTCTGTGAAGCGGG GCGAATAAGGGAAGCTATTGCGGTTCTGAGGGCAATAGAGACATGGGGTAGGGATGATTTAAGGCCTAATGTTGTTATGT ATAGCACCATTATTAATGGTTTGTGTAGAGATGGGTTTGTGAATGCGGCATGGGATTTGTATCGTGAAATGGTTGCGAAC AAGGTTTCTCCGAATGGTTTCACTTATGGGTCTTTGATTCATGGGTTGTGTGGTGCGGGGCGGCTGGAAGAAGCTATTGA ATTGCTGGATGAGATGTTGCGGGAGGGCATACGCGTAAGTGTTCATATCGTCACTGTTTTGGTTGATGCATTGTGTAAAA ACGGGAGGGTGCTTGACGCACGGTATCTGTTTGATGAAATGATTCAAAGAGGTTATGAACCTAACATTGTTACTTTCACC GCTTTGATGCGCGGGTATTGTTTAAATAATGACGTGGATGAGGCAAGAAAGCTGTTTGATAAGGCTGTTCGGTGGGGTAT TGTGCCTGATGTTCAGATTTTTACCGTCTTGATCGATGGATATTGCAAGGTTGAAAGATTAGGTGATGTGAAGAATCTCT TATGCGAAATGTACCGCAGGAACTTGGTTCCGAACCTTGTGACTTGGAATTCTCTGATTAATTGCTTTTGCAAATTGGAA GGAGTCTTGAGTGCTCGGGAGGTTCTTAAGGAAATGAATGCTAGAGGTCTGTCCCCTGATATTTTCACTTATACTACCTT ATTAGATGCTTTATGCAAAAGCAAACATCTTGATACGGCGATAACATTATTCAACCAACTGATTAAAAGGGGTTTCTCAC CTGATGTTTGGAGTTACACCATCATGATTAATGGATATTGCAAGAGTGAAAGGATAGATGATGCCATGAATCTTTACAAA AAAATGCTTCAAAAACATTTGGTTCCTCATATTGTAACTTACACTTCTCTCATTGATGGCTTGTGCAGATCTGGGGGAAT CTCAGCTGCGTGGGAGCTTCTCAATAAGATGCACCATAATGGTCTGCCCCCTGATAATATCACGTACAGTATCTTGTTAG ATGCTTTATGCAAAAGTGAACGTCTTGAACAGGCAATTTCATTGTTTAACCAAATGATCGAAAGGGGTTTGGCACCTGAT GTTCGGAGTTATACCATCATGATTCATGGATATTGCAAGAGTGAAAGGATAGATGAAGCCATGAATCTTTTCAACGAAAT GCTTCAAAAAAAATTGGTTCCTGATACAGTAACTTACATTTGTCTTGTTGATGGCTTGTGCAAATCTGGGAGAATCCCAT ATGCACGGCACCTTGTTAATGTGATGTATAACGATCGTCCACCCCCTGATGTTATCAATCACCTAGACGCACATCACACC AGTCATTACCTTGTTTCAGCGCATTGTTGA
Protein sequence (LotjaGi2g1v0189700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLPSFGAARHRNMNTILRHSQTRCIPTFLTLLLYSPRPISTSTTTTTPAAAVSSFHRMLNSHPPPRILEFNKLLTTLVKS KHYPTAISLCSKMELRGITPCVITLTILITCFCHVGRVALAFSVLGKILKRGYYPFDAVTLNALIKGICVSCGVLRAVKV HDELFSKGFRFNEVTYGILIDGFCEAGRIREAIAVLRAIETWGRDDLRPNVVMYSTIINGLCRDGFVNAAWDLYREMVAN KVSPNGFTYGSLIHGLCGAGRLEEAIELLDEMLREGIRVSVHIVTVLVDALCKNGRVLDARYLFDEMIQRGYEPNIVTFT ALMRGYCLNNDVDEARKLFDKAVRWGIVPDVQIFTVLIDGYCKVERLGDVKNLLCEMYRRNLVPNLVTWNSLINCFCKLE GVLSAREVLKEMNARGLSPDIFTYTTLLDALCKSKHLDTAITLFNQLIKRGFSPDVWSYTIMINGYCKSERIDDAMNLYK KMLQKHLVPHIVTYTSLIDGLCRSGGISAAWELLNKMHHNGLPPDNITYSILLDALCKSERLEQAISLFNQMIERGLAPD VRSYTIMIHGYCKSERIDEAMNLFNEMLQKKLVPDTVTYICLVDGLCKSGRIPYARHLVNVMYNDRPPPDVINHLDAHHT SHYLVSAHC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 51 | 51 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 24 | 33 | 10 | - | – | |
| Phobius | 34 | 51 | 18 | - | – | |
| Gene3D | 39 | 153 | 115 | 7.2E-18 | ||
| PANTHER | 51 | 278 | 228 | 5.2E-170 | – | |
| PANTHER | 51 | 278 | 228 | 5.2E-170 | – | |
| Phobius | 52 | 649 | 598 | - | – | |
| ProSiteProfiles | 66 | 100 | 35 | 7.739 | ||
| Pfam | 89 | 147 | 59 | 0.0042 | ||
| ProSiteProfiles | 101 | 135 | 35 | 9.208 | ||
| TIGRFAM | 103 | 135 | 33 | 2.0E-4 | ||
| ProSiteProfiles | 137 | 171 | 35 | 8.364 | ||
| Gene3D | 154 | 295 | 142 | 2.6E-37 | ||
| Pfam | 167 | 197 | 31 | 2.6E-9 | ||
| ProSiteProfiles | 172 | 206 | 35 | 10.041 | ||
| TIGRFAM | 174 | 199 | 26 | 4.5E-5 | ||
| Pfam | 209 | 257 | 49 | 2.0E-17 | ||
| ProSiteProfiles | 210 | 244 | 35 | 12.299 | ||
| SUPERFAMILY | 211 | 498 | 288 | 1.48E-7 | ||
| TIGRFAM | 212 | 245 | 34 | 1.4E-9 | ||
| PANTHER | 227 | 482 | 256 | 5.2E-170 | – | |
| PANTHER | 227 | 482 | 256 | 5.2E-170 | – | |
| ProSiteProfiles | 245 | 279 | 35 | 13.252 | ||
| TIGRFAM | 247 | 280 | 34 | 1.6E-9 | ||
| Pfam | 279 | 307 | 29 | 4.7E-6 | ||
| ProSiteProfiles | 280 | 314 | 35 | 11.685 | ||
| TIGRFAM | 285 | 316 | 32 | 4.8E-9 | ||
| Gene3D | 296 | 413 | 118 | 2.3E-35 | ||
| Pfam | 314 | 363 | 50 | 2.2E-14 | ||
| ProSiteProfiles | 315 | 349 | 35 | 12.54 | ||
| TIGRFAM | 317 | 351 | 35 | 2.4E-9 | ||
| ProSiteProfiles | 350 | 384 | 35 | 10.578 | ||
| TIGRFAM | 353 | 385 | 33 | 6.0E-6 | ||
| Pfam | 384 | 433 | 50 | 2.1E-16 | ||
| ProSiteProfiles | 385 | 419 | 35 | 12.036 | ||
| TIGRFAM | 387 | 421 | 35 | 1.3E-6 | ||
| Gene3D | 414 | 484 | 71 | 5.4E-23 | ||
| ProSiteProfiles | 420 | 454 | 35 | 12.814 | ||
| TIGRFAM | 422 | 456 | 35 | 1.6E-9 | ||
| PANTHER | 436 | 632 | 197 | 5.2E-170 | – | |
| PANTHER | 436 | 632 | 197 | 5.2E-170 | – | |
| Pfam | 450 | 482 | 33 | 1.7E-11 | ||
| ProSiteProfiles | 455 | 489 | 35 | 13.121 | ||
| TIGRFAM | 458 | 489 | 32 | 1.4E-8 | ||
| Gene3D | 485 | 551 | 67 | 7.2E-22 | ||
| Pfam | 489 | 538 | 50 | 2.0E-18 | ||
| ProSiteProfiles | 490 | 524 | 35 | 12.408 | ||
| TIGRFAM | 492 | 525 | 34 | 2.8E-8 | ||
| ProSiteProfiles | 525 | 559 | 35 | 13.493 | ||
| TIGRFAM | 527 | 561 | 35 | 3.7E-10 | ||
| Gene3D | 552 | 625 | 74 | 5.0E-23 | ||
| Pfam | 559 | 608 | 50 | 1.7E-17 | ||
| ProSiteProfiles | 560 | 594 | 35 | 13.822 | ||
| TIGRFAM | 563 | 596 | 34 | 5.6E-11 | ||
| ProSiteProfiles | 595 | 629 | 35 | 9.679 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0189700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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