Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi2g1v0458600 |
Transcript ID | LotjaGi2g1v0458600.3 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Protein kinase; TAIR: AT4G21390.1 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120; TrEMBL-Plants: tr|G7K104|G7K104_MEDTR Cysteine-rich receptor-kinase-like protein; Found in the gene: LotjaGi2g1v0458600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:95216060..95218465) extracted from Lotus japonicus Gifu genome v1.2.
ACAGGTGCAGCAGTGAAGATGCAATGATATGGTATGAGTTTTGCCAAGTTCGGTACTCCTTTCAGATGTTTTTCTCACGC TCAGTTTATACTGGAAAATATCCACAGCAGAATGATCAGGAGAAGAATGTCTCAGATCCTATTCGATTTGAACAACACGT GACTTATTTAATGAACAATCTCTCAGATGAAGCTGCTTTTAATCCTGCCAAAAACATGTTTGCAGCTGGGGAAATTAGGT CTCCAGGGAAAAGGACAATAGTTTATGGGCTTGTCCAATGTACCAGGGACATGTCTGGAACAGACTGCAGTAGTTGTTTA AGTTCTGCATTAACAGAACTTACAACATGCTGCTCGAGAAGAGAAGGAGGGATTATTGTCAGTAGAAATTGCAATGTTAG GTTTGATTTGTCCAAGTTCTTCAACACTTCATCAGCATACTTGTTGACTTATCCAACATCCAAAGGTATAGTAAGGCTTT TCCATCTGAAAATGTGTGTGTGTGTGTTTGTATTTCAAGAAGGAACTAATATAAGCTTCTCTTGATTTACAAGGAGGAGG GAAATGGAAGCCCTGGATGTTTGTGTTGACTATATGTGGCTCAATTTTAATATTAGCAGTTGTTGTTGGGTTGTGCACTG CTTGCCTCAGGAGAAGAAATGATAGAGACAGAGGTAAACTTCTATAATTGAAATCCATTAGCTATATTCATAAGAACATA TCAGAACTCAGTTCTATTTTACTTAAATATGAAATGAATCAGATGAAGAAAAGAGTGAAAGGATGATATTGCAAGATTTA GTTAGCCCCAGACATGTAGCAATTACCCAAGAAGGTGAGTTGATTAGTTCTGATGAAATGTTGTTCATGACCTTAGCAAC CATTAAAGCAGCTACTGGTGACTTTTCTGATAGAAATAAGCTGGGACAAGGAGGGTTTGGTGAAGTATACAAGGTCATAC ACTCATGCATTTCACTAAAATAAAATTCCTTTTGGGATGTGTACTTGTAGGGCCTAGTTAACATGTTTGATTTCGTTGCA GGGTGTTCTGTCAGATGGTAATGAAATTGCAGTAAAAAGATTATCAAGGAAGTCTTGGCAAGGCATGGAGGAATTCAAAA ATGAGATCATGCTCATTGCCAAACTTCAACACAGGAATCTGGTGAGGCTGTTGGGTTGTGTCTTGGAGGGAGACGAAAGA ATGCTTGTATATGAGTTCATGTCAAACAAAAGCCTTGATCAATTTATCTTTGGTTTGTTCTGTTGCTCACTTTTCAATTT TCATAAAGCCTTCTACATGTATCTTATATTTGGCTCTTGTTCTTTGTAATTCAAGATGCAGGAAAACGTCCCAGACTTGA TTGGAAAACATGCCAAGGTATTATCAATGGCATAGCCAGAGGACTAGTTTATCTTCACGAGGAGTCTCGCCTTAAAATCA TTCACCGAGACCTAAAGCCAAATAATGTGTTGCTAGATCATGAACTGGTTGCTAAAATATCAGATTTTGGCATGGCCAGG ATATTTTCTGAGAATCAGAATGCAGCTAATACCAAAAGAGTTGTGGGAACATAGTAAGCCAACTTCCACTCACCCATCTT TTATTTCCCCTTTTAGTATTTTTATTCCAGATTATTTTCCATTAACTTGACTATGAATCCTGATGTATAAAACAGTGGAT ATATGGCTCCAGAGTATGCAATGGAGGGATTGTTCTCTGTAAAATCTGATGTCTTCAGCTTTGGTGTTATCTTGCTTGAA ATCATTAGTGGGAAAAGAAATAACGGCTTTTACTTAACCGAACTTGCCCCAACACTTCTTGCACATGTAATTTCATCAAC CAAACACTTGATTCAAGTCAGTAAATCTTCAAAATACATAATTCTGTTTATTCAAATTGTGACAGGCGTGGCAGCTGTGG AATGAAGGAAAAGAATCGGAATTTGTGGATCCCTTGTTACGGGAATCATGTCTTGCTTCTGAACCTGAAGTTCTGAGGTG CGTGCACATTGGACTTCTGTGCGTGCAGCAAGATCCAGAAGACAGACCCACCATGTCAGATGTGGTGGCTCTCCTGGGAA GTGAATCAACGGTTCTTCCCCAACCAAGCAAACCATCTTTTCCTTTGCGTAGGGTGCATCATGTAGATCCATCAGCATCA ACAAATCCTTCAGTGAGTGAGATGATGTGGTCTAGTGTTTTGCCACGATGATTGATCTTGTGACAATAGAGGGGTGCTAG CATTTTAATTACCACAACATTCTTGACAGTAGCATAGATAGAAACTAGAACAGACATGCTTTTATGGGTAGTAACACACC ATGACCATACCATATATATACTCGTGTGGGGAAATCATGTTATAATAAGATCCCAACTCAAGGCTTGTCTACTTGAAAGA AATCAA
CDS sequence (LotjaGi2g1v0458600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGTGTTGACTATATGTGGCTCAATTTTAATATTAGCAGTTGTTGTTGGGTTGTGCACTGCTTGCCTCAGGAGAAG AAATGATAGAGACAGAGATGAAGAAAAGAGTGAAAGGATGATATTGCAAGATTTAGTTAGCCCCAGACATGTAGCAATTA CCCAAGAAGGTGAGTTGATTAGTTCTGATGAAATGTTGTTCATGACCTTAGCAACCATTAAAGCAGCTACTGGTGACTTT TCTGATAGAAATAAGCTGGGACAAGGAGGGTTTGGTGAAGTATACAAGGGTGTTCTGTCAGATGGTAATGAAATTGCAGT AAAAAGATTATCAAGGAAGTCTTGGCAAGGCATGGAGGAATTCAAAAATGAGATCATGCTCATTGCCAAACTTCAACACA GGAATCTGGTGAGGCTGTTGGGTTGTGTCTTGGAGGGAGACGAAAGAATGCTTGTATATGAGTTCATGTCAAACAAAAGC CTTGATCAATTTATCTTTGATGCAGGAAAACGTCCCAGACTTGATTGGAAAACATGCCAAGGTATTATCAATGGCATAGC CAGAGGACTAGTTTATCTTCACGAGGAGTCTCGCCTTAAAATCATTCACCGAGACCTAAAGCCAAATAATGTGTTGCTAG ATCATGAACTGGTTGCTAAAATATCAGATTTTGGCATGGCCAGGATATTTTCTGAGAATCAGAATGCAGCTAATACCAAA AGAGTTGTGGGAACATATGGATATATGGCTCCAGAGTATGCAATGGAGGGATTGTTCTCTGTAAAATCTGATGTCTTCAG CTTTGGTGTTATCTTGCTTGAAATCATTAGTGGGAAAAGAAATAACGGCTTTTACTTAACCGAACTTGCCCCAACACTTC TTGCACATGCGTGGCAGCTGTGGAATGAAGGAAAAGAATCGGAATTTGTGGATCCCTTGTTACGGGAATCATGTCTTGCT TCTGAACCTGAAGTTCTGAGGTGCGTGCACATTGGACTTCTGTGCGTGCAGCAAGATCCAGAAGACAGACCCACCATGTC AGATGTGGTGGCTCTCCTGGGAAGTGAATCAACGGTTCTTCCCCAACCAAGCAAACCATCTTTTCCTTTGCGTAGGGTGC ATCATGTAGATCCATCAGCATCAACAAATCCTTCAGTGAGTGAGATGATGTGGTCTAGTGTTTTGCCACGATGA
Protein sequence (LotjaGi2g1v0458600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFVLTICGSILILAVVVGLCTACLRRRNDRDRDEEKSERMILQDLVSPRHVAITQEGELISSDEMLFMTLATIKAATGDF SDRNKLGQGGFGEVYKGVLSDGNEIAVKRLSRKSWQGMEEFKNEIMLIAKLQHRNLVRLLGCVLEGDERMLVYEFMSNKS LDQFIFDAGKRPRLDWKTCQGIINGIARGLVYLHEESRLKIIHRDLKPNNVLLDHELVAKISDFGMARIFSENQNAANTK RVVGTYGYMAPEYAMEGLFSVKSDVFSFGVILLEIISGKRNNGFYLTELAPTLLAHAWQLWNEGKESEFVDPLLRESCLA SEPEVLRCVHIGLLCVQQDPEDRPTMSDVVALLGSESTVLPQPSKPSFPLRRVHHVDPSASTNPSVSEMMWSSVLPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
SignalP_EUK | 1 | 22 | 22 | - | – | |
Phobius | 1 | 18 | 18 | - | – | |
Phobius | 1 | 1 | 1 | - | – | |
TMHMM | 2 | 24 | 23 | - | – | |
Phobius | 2 | 13 | 12 | - | – | |
Phobius | 14 | 18 | 5 | - | – | |
Phobius | 19 | 397 | 379 | - | – | |
Gene3D | 44 | 155 | 112 | 2.8E-37 | – | |
PANTHER | 56 | 366 | 311 | 9.6E-132 | – | |
PANTHER | 56 | 366 | 311 | 9.6E-132 | – | |
SUPERFAMILY | 61 | 353 | 293 | 1.89E-85 | ||
ProSiteProfiles | 80 | 360 | 281 | 40.782 | ||
SMART | 80 | 360 | 281 | 2.5E-41 | ||
Pfam | 84 | 352 | 269 | 7.0E-51 | ||
ProSitePatterns | 86 | 108 | 23 | - | ||
CDD | 86 | 353 | 268 | 2.03283E-97 | – | |
Gene3D | 156 | 361 | 206 | 2.6E-60 | – | |
ProSitePatterns | 201 | 213 | 13 | - | ||
MobiDBLite | 362 | 397 | 36 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0458600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…