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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0458600 |
| Transcript ID | LotjaGi2g1v0458600.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT4G21390.1 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120; TrEMBL-Plants: tr|G7K104|G7K104_MEDTR Cysteine-rich receptor-kinase-like protein; Found in the gene: LotjaGi2g1v0458600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:95216060..95218465) extracted from Lotus japonicus Gifu genome v1.2.
ACAGGTGCAGCAGTGAAGATGCAATGATATGGTATGAGTTTTGCCAAGTTCGGTACTCCTTTCAGATGTTTTTCTCACGC TCAGTTTATACTGGAAAATATCCACAGCAGAATGATCAGGAGAAGAATGTCTCAGATCCTATTCGATTTGAACAACACGT GACTTATTTAATGAACAATCTCTCAGATGAAGCTGCTTTTAATCCTGCCAAAAACATGTTTGCAGCTGGGGAAATTAGGT CTCCAGGGAAAAGGACAATAGTTTATGGGCTTGTCCAATGTACCAGGGACATGTCTGGAACAGACTGCAGTAGTTGTTTA AGTTCTGCATTAACAGAACTTACAACATGCTGCTCGAGAAGAGAAGGAGGGATTATTGTCAGTAGAAATTGCAATGTTAG GTTTGATTTGTCCAAGTTCTTCAACACTTCATCAGCATACTTGTTGACTTATCCAACATCCAAAGGTATAGTAAGGCTTT TCCATCTGAAAATGTGTGTGTGTGTGTTTGTATTTCAAGAAGGAACTAATATAAGCTTCTCTTGATTTACAAGGAGGAGG GAAATGGAAGCCCTGGATGTTTGTGTTGACTATATGTGGCTCAATTTTAATATTAGCAGTTGTTGTTGGGTTGTGCACTG CTTGCCTCAGGAGAAGAAATGATAGAGACAGAGGTAAACTTCTATAATTGAAATCCATTAGCTATATTCATAAGAACATA TCAGAACTCAGTTCTATTTTACTTAAATATGAAATGAATCAGATGAAGAAAAGAGTGAAAGGATGATATTGCAAGATTTA GTTAGCCCCAGACATGTAGCAATTACCCAAGAAGGTGAGTTGATTAGTTCTGATGAAATGTTGTTCATGACCTTAGCAAC CATTAAAGCAGCTACTGGTGACTTTTCTGATAGAAATAAGCTGGGACAAGGAGGGTTTGGTGAAGTATACAAGGTCATAC ACTCATGCATTTCACTAAAATAAAATTCCTTTTGGGATGTGTACTTGTAGGGCCTAGTTAACATGTTTGATTTCGTTGCA GGGTGTTCTGTCAGATGGTAATGAAATTGCAGTAAAAAGATTATCAAGGAAGTCTTGGCAAGGCATGGAGGAATTCAAAA ATGAGATCATGCTCATTGCCAAACTTCAACACAGGAATCTGGTGAGGCTGTTGGGTTGTGTCTTGGAGGGAGACGAAAGA ATGCTTGTATATGAGTTCATGTCAAACAAAAGCCTTGATCAATTTATCTTTGGTTTGTTCTGTTGCTCACTTTTCAATTT TCATAAAGCCTTCTACATGTATCTTATATTTGGCTCTTGTTCTTTGTAATTCAAGATGCAGGAAAACGTCCCAGACTTGA TTGGAAAACATGCCAAGGTATTATCAATGGCATAGCCAGAGGACTAGTTTATCTTCACGAGGAGTCTCGCCTTAAAATCA TTCACCGAGACCTAAAGCCAAATAATGTGTTGCTAGATCATGAACTGGTTGCTAAAATATCAGATTTTGGCATGGCCAGG ATATTTTCTGAGAATCAGAATGCAGCTAATACCAAAAGAGTTGTGGGAACATAGTAAGCCAACTTCCACTCACCCATCTT TTATTTCCCCTTTTAGTATTTTTATTCCAGATTATTTTCCATTAACTTGACTATGAATCCTGATGTATAAAACAGTGGAT ATATGGCTCCAGAGTATGCAATGGAGGGATTGTTCTCTGTAAAATCTGATGTCTTCAGCTTTGGTGTTATCTTGCTTGAA ATCATTAGTGGGAAAAGAAATAACGGCTTTTACTTAACCGAACTTGCCCCAACACTTCTTGCACATGTAATTTCATCAAC CAAACACTTGATTCAAGTCAGTAAATCTTCAAAATACATAATTCTGTTTATTCAAATTGTGACAGGCGTGGCAGCTGTGG AATGAAGGAAAAGAATCGGAATTTGTGGATCCCTTGTTACGGGAATCATGTCTTGCTTCTGAACCTGAAGTTCTGAGGTG CGTGCACATTGGACTTCTGTGCGTGCAGCAAGATCCAGAAGACAGACCCACCATGTCAGATGTGGTGGCTCTCCTGGGAA GTGAATCAACGGTTCTTCCCCAACCAAGCAAACCATCTTTTCCTTTGCGTAGGGTGCATCATGTAGATCCATCAGCATCA ACAAATCCTTCAGTGAGTGAGATGATGTGGTCTAGTGTTTTGCCACGATGATTGATCTTGTGACAATAGAGGGGTGCTAG CATTTTAATTACCACAACATTCTTGACAGTAGCATAGATAGAAACTAGAACAGACATGCTTTTATGGGTAGTAACACACC ATGACCATACCATATATATACTCGTGTGGGGAAATCATGTTATAATAAGATCCCAACTCAAGGCTTGTCTACTTGAAAGA AATCAA
CDS sequence (LotjaGi2g1v0458600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGTGTTGACTATATGTGGCTCAATTTTAATATTAGCAGTTGTTGTTGGGTTGTGCACTGCTTGCCTCAGGAGAAG AAATGATAGAGACAGAGATGAAGAAAAGAGTGAAAGGATGATATTGCAAGATTTAGTTAGCCCCAGACATGTAGCAATTA CCCAAGAAGGTGAGTTGATTAGTTCTGATGAAATGTTGTTCATGACCTTAGCAACCATTAAAGCAGCTACTGGTGACTTT TCTGATAGAAATAAGCTGGGACAAGGAGGGTTTGGTGAAGTATACAAGGGTGTTCTGTCAGATGGTAATGAAATTGCAGT AAAAAGATTATCAAGGAAGTCTTGGCAAGGCATGGAGGAATTCAAAAATGAGATCATGCTCATTGCCAAACTTCAACACA GGAATCTGGTGAGGCTGTTGGGTTGTGTCTTGGAGGGAGACGAAAGAATGCTTGTATATGAGTTCATGTCAAACAAAAGC CTTGATCAATTTATCTTTGATGCAGGAAAACGTCCCAGACTTGATTGGAAAACATGCCAAGGTATTATCAATGGCATAGC CAGAGGACTAGTTTATCTTCACGAGGAGTCTCGCCTTAAAATCATTCACCGAGACCTAAAGCCAAATAATGTGTTGCTAG ATCATGAACTGGTTGCTAAAATATCAGATTTTGGCATGGCCAGGATATTTTCTGAGAATCAGAATGCAGCTAATACCAAA AGAGTTGTGGGAACATATGGATATATGGCTCCAGAGTATGCAATGGAGGGATTGTTCTCTGTAAAATCTGATGTCTTCAG CTTTGGTGTTATCTTGCTTGAAATCATTAGTGGGAAAAGAAATAACGGCTTTTACTTAACCGAACTTGCCCCAACACTTC TTGCACATGCGTGGCAGCTGTGGAATGAAGGAAAAGAATCGGAATTTGTGGATCCCTTGTTACGGGAATCATGTCTTGCT TCTGAACCTGAAGTTCTGAGGTGCGTGCACATTGGACTTCTGTGCGTGCAGCAAGATCCAGAAGACAGACCCACCATGTC AGATGTGGTGGCTCTCCTGGGAAGTGAATCAACGGTTCTTCCCCAACCAAGCAAACCATCTTTTCCTTTGCGTAGGGTGC ATCATGTAGATCCATCAGCATCAACAAATCCTTCAGTGAGTGAGATGATGTGGTCTAGTGTTTTGCCACGATGA
Protein sequence (LotjaGi2g1v0458600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFVLTICGSILILAVVVGLCTACLRRRNDRDRDEEKSERMILQDLVSPRHVAITQEGELISSDEMLFMTLATIKAATGDF SDRNKLGQGGFGEVYKGVLSDGNEIAVKRLSRKSWQGMEEFKNEIMLIAKLQHRNLVRLLGCVLEGDERMLVYEFMSNKS LDQFIFDAGKRPRLDWKTCQGIINGIARGLVYLHEESRLKIIHRDLKPNNVLLDHELVAKISDFGMARIFSENQNAANTK RVVGTYGYMAPEYAMEGLFSVKSDVFSFGVILLEIISGKRNNGFYLTELAPTLLAHAWQLWNEGKESEFVDPLLRESCLA SEPEVLRCVHIGLLCVQQDPEDRPTMSDVVALLGSESTVLPQPSKPSFPLRRVHHVDPSASTNPSVSEMMWSSVLPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 18 | 18 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| TMHMM | 2 | 24 | 23 | - | – | |
| Phobius | 2 | 13 | 12 | - | – | |
| Phobius | 14 | 18 | 5 | - | – | |
| Phobius | 19 | 397 | 379 | - | – | |
| Gene3D | 44 | 155 | 112 | 2.8E-37 | – | |
| PANTHER | 56 | 366 | 311 | 9.6E-132 | – | |
| PANTHER | 56 | 366 | 311 | 9.6E-132 | – | |
| SUPERFAMILY | 61 | 353 | 293 | 1.89E-85 | ||
| ProSiteProfiles | 80 | 360 | 281 | 40.782 | ||
| SMART | 80 | 360 | 281 | 2.5E-41 | ||
| Pfam | 84 | 352 | 269 | 7.0E-51 | ||
| ProSitePatterns | 86 | 108 | 23 | - | ||
| CDD | 86 | 353 | 268 | 2.03283E-97 | – | |
| Gene3D | 156 | 361 | 206 | 2.6E-60 | – | |
| ProSitePatterns | 201 | 213 | 13 | - | ||
| MobiDBLite | 362 | 397 | 36 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0458600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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