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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0190800 |
| Transcript ID | LotjaGi5g1v0190800.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pre-mRNA-splicing factor SLU7; TAIR: AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor; Swiss-Prot: sp|Q9SHY8|SLU7A_ARATH Pre-mRNA-splicing factor SLU7-A; TrEMBL-Plants: tr|A0A0A0LFN9|A0A0A0LFN9_CUCSA Uncharacterized protein; Found in the gene: LotjaGi5g1v0190800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:48331695..48341424) extracted from Lotus japonicus Gifu genome v1.2.
AAAGAAACATCGAGAGTGTTCCGTAGCGTAGGGCATCGCCATCGTCGTCTCTGTGTTCCTCTCCCCTTCTCGCATTCTCT GATTACCTGTGATGGCTACTGCATCAGGTTCTTCTTTTCCCAAACTTCCATGCTTTTTCCTTCTTTTCCTTGAATGCAAT TCAGATTTCAATGAATAACATTTGCGTTCAATTGCATGTAAACTGTTTACCCAGAAAAACCACCTTGCATTTGATTGTGA AAATAGAAAGCATCTTTATATTTTTTTGTTGAAGAAAGTACATTTGAGTCCTGTTACTTTGTGTCAATTCCCCGGCCTAA GGTTTCGGTTGAGTCTTGTGTCTGGAAAAAACTCGGCTGCAGAGCTAGCCTCAATGTAATGTTAGATGTTCCCGACTCGA ACTTGATTGTCTCGTACATGTGTTTAGACAGAAAAAAAAATCCTCTTACTTTGTAGACTAGGTAGGACAATTTTAATATT TCAGTTGTGAATATTTTTGTGGAGGGTAGTGTGTGTGATTTCTGTTGTTTGGTGTTTGAAAATATTTTAGTAGTTCATGA AATGGCTCTATTAGGAAACAGGTTATCTTTCAAGATATACTCACAGCTTCTATTCAATCACTGCTACACCCATAAATATC TGCCATTTGAATGGATTTTTTATCCATCCATGTAATGAATTTCTAACATGTAATTTGGGACAATGCGAAACGCCATTGAC ATTGAAGCATATTTATGGGAGGCTCTTGTATTTATTGTATAAAGGCAGGGAGAAAATCAACATCAGCTAACAGAACAAGG GAGCAAAAATAAGACAGAAGAACCTGAATGATCACTGTGACTTTGCTTGTAATCCAATGGCAAAATTTCCTTTGAGAATC TCCCAAACCATGTACAAGGAGCTTTAGTCCACACTAAGTTTTCTTTAATTTGCACGTATTCTTTCCTCCTCTTTCGAGCT CGTAACCTAATGGAATCTCCTTATAAACTTCCACGAAGGAAGGAATTTTTCACATCAAATTGTTGCAACTCCCATCCGTA GTGAGCACTGAGCAGTACGATAGTATTCTGACCGTGTTCATCTTCGCCACTAGTGCAAATGTCTCCTAGCAGTCAATTCC TTATGTCTGAGTGTACTATTTTACTTACGTTTTATAGCTATCTAAGGTCCCAGGCTTTGGGTTAACAATGTAAAGGAAAC AGATAACATATGAAGTTACATAAGTATCATCATTTCACGTGACTCAATATATATTTCCAAGAGTTATAACACTCTTATTC TCATGGATCTATGTCTCAAATTTTAATTGTGATGATCTGAAATATTGCTCTATGAACATTCAAAGTAATCATCACAATAC TATTTGAATAAATGTGTGCAACTTTTCCTTGTGGGTAAGGCTGCAATTTAGCTACAAAGGAAAATTTTAGATATGATTAA GCATAGTTTAATCCTAAATTGATGTTCTTTTAGAATTTGAAAAATAAAACTACAAAAAAAAATCAAAATATTAATAATGA AAAAATTGCCAACATAATTGAATAGTTAGATTGTGGAAGGACACAGGACCATCTGAAAACTGATAACTAAGTGATGGTAA GCCATTGTTAGATAAGTTTTATAATAAGAAAGATTATGATGATAAAATTGTTAATGTTAGCTGAGTGGTTGTGCAATCAC TCTTACATGGCCTTCAGTGTAGTTTTGTTTATCTTGCATTGCATGTGAAGACACTACATGATGCTTAAGAAAATAAATGT GCTTATAAACACCTGCTTTGATGTTGCAGCAACCTTTAAATCTAGGGAGGACCACAGAAAACAGATTGAATTGGAAGAGG CACGTAAAGCTGGGCTTGCACCAGCTGAGGTAGATGAAGATGGGAAAGAGATTAACCCTCATATCCCCCAATATATGTCT TCTGCTCCATGGTATCTGAATGCTGAGAAACCTGTAAGCTTCACAACTTTCTACTACCTTCCTTCTTCTGTTCCTCTAGC CAGCCCCTATTTGTTATGACAGTAAAGTTCTGTATTCTGAGCCGCTTTTTCTATTTTTTCTTGGTAGAGTCTAAAACATC AAAGGAAATGGAAATCTGATCCGAATTATACGAAGTCTTGGTACGACAGAGGAGCAAAAACATTTCAGGCTGACAATTAC AGGAAGGGAGCATGTGAAAAGTAAGTGGGCTTTGTTGTTTTTGTCAAGATTTTCAAATCCTTGTATGTCTCTGTTTATCT GTTTTGGGAACGGTGTCTTGCTACATGAAGATTTGAACTGTAAAACGAGTACAGGTTGGTTTTCTTTAGTTGCAATGATA AACATGGATTAGATATGGAGTTATTATGCTGGTAAACTCATGTAATGATAATATTCAATTGTTGAACTTATCCTATTAAT TATGTCCCTTAGTACATAGTTTTGTGATGCTATTTTAATCAGATCAAAATGCTGGGCCAGGCATGATTAGTTTTATTTAT TCTATTATAAATTCTTATACGAGAAATCATTTTATTTTTTCTTGAGGTTTACATTGATGAATTAAAGCCGACTTAGTTAC TCATAAGTCATATTGTCATAACCATAGACTTGTTGTTTAGGTGTCTTGTGCAAATTAAAATAACAGATGTATAGCCTCAT TTGTTATTGCCAAACATCCTGCTGTGCTATTTAGTTTAGCTCTCTCTTATGCAAAGTCAATCAAATTCTTTCCTGGACTC GTTTCTTCCGACTCAAATGTGCTTATGAAGATGGATGTGTGATAGAACTGGACGAATTTAAGGTAAAGATGCACTTTCTA TTGGTAGCATGATATGAATACAGGATATCCTTCTCCAGCTATCTGAGAAAGCTGAGCTCTCCCTCCCAATTTTCACTCAA TGACCCAAAATTCATCTCCATTATTTGCCTCCTGGTATTTATATCTTCTGATTTCTCTCTTTACCTATCTCTAAATGATG ATTGGGGATCTGCAAAAAATGTGTTGCTTATGAAGTTCACTTTTAAAGCTAGCATCTATCATACCATTTCATGTCTGCGA GAAATCTAGTCATAATATTTTACGTAGTTAGTGTTAGAAATATAATCACATGGTAGGTGGACATGTGCAGTATCCACGGT TCAAGCCCAAGTGGGTTCTTGCGCTGCGTGAGGGGGCATGTTAGAAATATAACCACTCATGTACCCTTACCCAATAGCTT AAGCTTTTGGGATTTTGGTTCATGACAATTGGGTTATGTAGAAATGCTCACCTTTTTTAGCTCAGGATATTGTGTAGCGT TTCTGATATACTCGTATTGTGATCTTGTCATCATGAGAATCTAGTTATCTTTATCTCGTTTCTGTGATCAAGAAGTGGGT GTTGTAAATTTTAGGTATCAATCACAGAATGGTTAAATCAAAGAAATGGTTCTTAAAGAAAAGCAAGCTTGCCTATATTT AGGGGTTTTTTTTTCCTTGCACTCCTTTTCTTCTTTGCTCTTTTTTTTTGTTATGTGGGCGGGGTTGCTTTTCTGATATC AATTGATAAAATTTAAAGATATGATAGTTTTATTTCAAGCGGCGTGAATAATTTTATTTAATATTTTAAGTTAAACTTGT TTTTTCTTGAATTTTTATTTGACTTATTTCGTTAGTTGTTAAGATTGGCATTATTTTTCACCCATTAATTTTTGGCTTAT ATTTGTTCTGAAGCTGTGGTGCAATGACACATAATACAAAATCATGCGTGGAGAGGCCTCGGAAGCTTGGAGCAAAATGG ACCAACATGCATATCGCTCCTGATGAAAAGATAGAAACATTTGAACTTGATTATGATGGCAAGAGAGATCGATGGAATGG TTATGATCCAGCCACCTATGCTCGTGTCATTGAAAGATATGAGGCAAGGGAAGAGGCTCGGAGGAAGTATTTAAAAGAAC AGCAATTAAAGAAACTGGAGAAGAAAAACAAAAAGCAAAGAGGGGAAAATGAGTCTAGTGATGATGATGAATATGAAGAT GAAGATGCTCATGCTCTAAAGGTTGATGAAGCCAAGGTTGATGAGAGCAAACAGGCGGACTTTGCCAAGGTTGAAAAGCG TGTTAGAACAACAGGAGGTGGTAGTACAGGAACTGTAAGGTGTGCTGCTTTACTGTTTGTATTTGTATTCCTATTTGTTT GTTATGTATGTAGCACATCAGAATCAGTGTCTCACGCAAATAGCTTCACCCAAAACAATGTCGTATTATGTGATTATTAT TCTGATTCTATTTGTTTGCTTCAGAAACTTGCGTATCCGAGAGGACACTGCAAAATACCTTCTGAATCTTGATGTCAATT CTCCTTATTATGATCCAAAAACCCATTCTATGCGAGAGGATCCCCTTCCTGATGCTGATCCTAATGAGAAGTTCTATGGA GTGAGTATCATGGAAGATTTTATTTGGTTGTTAGATCTGTAAAACATTGGAAATGCTTTACTTAATGTGCTTACTTTTGT CCTGACAGGGAGACAACCAGTATAGAATGAGTGGACAAGCTTTGGAGTTCAAGCAACTTAACATTCATGCCTGGGAAGCA TTTGAGAAAGGCCAGGATGTCCACATACAAGCTGCACCTTCCCAAGCTGAATTACTATATAAGAATTTTAAGATAATGAA AGAGAAGTTGAAGTCACAAACAAAAGATGCCATAATACAGAAGTATGGAAATGCAGCAGCCCAAGAAGAGCTTCCAAAGG AGCTTCTTTTGGGGCAAACTGAGAGACAAGTCGAATATGATCGCGCTGGCAGAATTATAAAAGGCCTGGTATTATTCAAT ATGAAAATCATGTCATTTTTGTTTTCTTTATATGGATGAAACATATTTAATTTAATTTTTATGCTTTATGGTTTTGTTTC CAGGCCTTTACTTACCATTAGGTTTTAGTATGATATTCCATTTATTAGGCTTATCAGTGAGAAAATATAGGAGAGTCTGA TATGATGTCTTTTAGATTTTGGTGATCTTGCATGTGATCATTTGACATGTTTTTCTTTGATTTCTGAATTTAGAACGTAC AATGCTATGGGAGGATTAAATAAGTTACTAGAATCATATTCCTTAGTTTGAATGCATTTTAAACTACAACTGATCAATTG TAGTTTTCTCTGTGCAGTACCCATGTTTGAATGAAGTGGTGTATACTTTTTTTCTTTTTTGAAATTGTGCAAATTTTCTA CTGCGATAAAGTTGTAGACTAGTTTTCAACTTTGTCACTTAATCATCATAATGCTTCAAATGGTGGAAACTTTTTCTCTT CTGGTGATTAATATTTTGGTTTTATACTTGCAGGAGGCATCCCTTCCAAAAAGCAAGTATGAAGAGGATGTGTACATTAA TAATCACACAAGCATATGGGGTTCATGGTGGAATGATCATCAATGGGGATACAAATGTTGCAAGCAAACTATACGGAACA GTTACTGCACTGGCGCAGCAGGAATTGAGGCTGCTGAGGCAGCAGCGGATTTAATGAAGGCAAACATTGATCGTAAAGTA GCATCTGAAGGCAAGTCTTCCTATTTAACCATTTTTAGAATATTCTTTGGGCTGTCATTCTTTATTTGAAATTGCTTCTA TATGATTTATATGGCATTCTGTTTATTTTATCTTCGTCAATGCTGTTGTTTTCCATTAACTTTGTTTGGACACACCTTGA TTTTTTTTTTTGAAAATAAACATGAATATTATTATGGGCCAACCGGCCTAGAAGCAATTACATCCAAGTTTACCAAGCCA ATAACGGCATCAGGAACTTCTTCCACCCATACAGAATTCGCATAAGTGGAAGCGTTCTTAGCCAAAAAGTCAGCAACCAC ATTACCAGAGCGTCTAACAAAGGACAAAGAAAATAAATCAAACAGCGGAACATAAGAACGACAATCTCTAATAATATTAT CCAAATAGGAATGACCCACCACCTCCTTCTGCCACCACTGAAATAACTGGAGACAATCTGATAGAAACCAGAAATTGTAG ATGTATTATTGAAGAACCCTAATCCCTAATTTGGGAATTAGAGCAAGTTACATGGAAGAGATGCCAAACACTCTTCCCAA ACCTAGAGAGAAACCCAATGTTCTCCCTAAACCCCAATTCCAAACTGAATACAAAAGATACCCCTAATGTTCACTAACCT CTCTTATTTATAGGCAACATGCCTTATAACTGTCTAACTAACTTCCTAACAACTAACAATTCATAACTAACCCTGCATTC CTATCACAATCTGTCTCTAAACAAACTCGCCTGAAGCCAAGCTCAGTCGCCAGCTGCATCGTCCACCTCAAACCACACAC CTCCGCCAAAAGAGATGAAAGAATGGGCACCGGGTAGGAGGTAGCAGCTGCCATGATCTCGCCTTGATGGTTGCGAGCCA CCATACCCAGCCCCGCCACCTTACCGTCCACAAATGAAGCATCAAAATTCAGCTTAACCACTCTTTCTTGAGGCCTTCGC CACACAGATATGCTCGTCGATGTCCCCTCACGGGCCTTCGAAGGAAGCACCCTTGCCATCCCCATCACGCGGTCAATGAC CTCTGCAACCACCAGCCTACCATTACGAAACAAGACCCTATTCCTCACCTCCCAAATCTGATAAATCAGTGTTTGTGCCA TGGCTACCACCTCGGGCTGTTGCTCTTGCAGAATCGACGTCCACATCGCTTGGAAAGAAGGCACGTTCTCGACTCTAAGG GAGAGGGGAGAAGCGTACCAAATCGCCATTGCCGCCGGACACCGCATGAAGATGTGTTCCGTAGACTCGCTATCATGTCC ACAAAGAACGCAGTCTGGGTCTGTGTCTACATGTCGCCGGAAAAGTTGTTCACGAACCGGAAGGAAGCCTCTGATAGCTC TCCAAGTTGTCTCCTTGCATCTAGGAAGTGCGCCGGTAGCCCAAAACTTTCGCCACAAATTTGGAAGCAAAGTCAACCTC ATCGAGGAAGATGACGAAGCCACCTCCAAGGCTAGTAAGCCACAAATGTAATTGTACCCTGTTTTTGATGTATATTGACC ATCAGAAGTGTAAGGCCAAGATAAAACATCTTCACCCCCGTGCAAATCCAAAGGAATGGCTAGTATATGCGATGCTGTTG CTGGATGGAAAATTTCCTCAATCCATTCTCGGTTCCAACGTTTTGGACCTTCCACAATCATGTCTGAAACACGAGCAATG CCAAGAGCTTCCGCCACATCAATACGATAGGTGAGCAGGACTCCATTTGGCAGCCACTTATCTGTCCATGCCTGGACCTT TGAGCCATCTCCTATGTGCCATAAGCCACCTCTTTCAAAGATCCAACTAGTTTTAAGGATACTAGACCAAGCGTAGCTAG GGCGATAACCCTTCCGGGCTCCCCAAATCGACCCTCTCGGAAAATAAACCCCCTTGAAAACCTTTGCCAGTAAGGTATCC GGATGAGGACACACCTTGAATTTGTTATGACATATGTTTGTTGACTATTTATGTGCTTTCCATATTGTATGATCTAATCT GATATAAGAATAATAACAACTGCTTGTATCATCAATTTCTCATTGCATGTGTTTCATTTCAACAAAATGCAGATACTCCT GCTCCAGCAGAGGAAAAAAGGCTTGCTACTTGGGGAACTGATGTACCTGATGATCTGGTCCTGGACCAGAAAAAACTTGA TGAGGCCCTTAGAAAGGTAACTTTTTATTATTATTTTTTTTCCAATTTTCTTTTTCCTTTCGAATATTCATTTCTTATTT AGATATCATGTGAAATTGTGAATCACTACATTGCCTAATTTGGAGCTTTACAGTTCGAAGATATGTCGGATATGAATAAT CATTTGGTTATCTTAATTTGTTAAACAAACCATTTCTGTTTGATCAGGAGGATGAAAGGAAGAGGGAGGAAAAAGATGAA AGGAAACGCAAGTATAATGTTAGATGGAATGATGAGGTAGTGTTTTTGTTTAGCAATTTTGTTCACCTGTAATGTAATTC ATAACACATCAATTATGTTGGGAAGATCAAGATTGTGTTGACACTATAATGCTTTTTGCAGGTCACTCCTGAAGAGATGG AGGCATATCGCGTGAAAAAGATTCATCATGATGATCCCATGAAAGATTTTCTGCATTAGCTGTCTTTTTCTTTCTTTTGT TACTGGGATAGGACTGTGCATATCTTTGGTCCATGGGTTGGAAGCACCAGCAAGCGCCACCCTAGAATGTATATTGCTTG TAAAGGATCCTTTTAGATTGTGGCTTCCCCAACCCCATTTAGTCTTCAATTAAGATATTTTCTTTGTGAGGTCTATAAAC TCCTGCTTACTATTTGTCTACAGATATTAAGTGAAAGTCCTAATCTGCAACTATATTTTGAGGAAAAGGTAAAATATGTA CTTGGATTTCGGTTGAACTTTGCGTTGAGTCAAACGGCAAACCAAATTGTTGAGTCAAACAGAATGTCAAACATACACCT AATAAATGGATGAAACACATTGTGTTGCACACTGAAAAACAAGAACAATAATGCTCTTTCTGACTTATATTACATTGTTT ACAAACTGAGTTGATCAGAGTAAAATAAATCCACAATTGAGTATTTCCTGTGAGCTAAGAATGAAGAATTAAATTTAAAA CCAGGCAAAGGAAAAATAATTCCTTAAAAAAATCCAAGATATCTTGTCATAACTTCCTTGCAAATCCACTCCATGTGATA ACCCAAGATGAAGCACTAGAAAAGCAATCCCAATCAACCATGTACCATGTTACTATGAATCACATACGATGTGGTAGAGA GAATAGATAGTGGGAATCAAGTTTCTTTCAGCCATTTCGATCTAGCCTTTCCTGTGATTCCAGCAGAGACCTCTCTTTCT GAATCCTCATATCTTGATGAAACTTGGAGATGAACTCCTCTGCTTTCTCATCCACCTGAAGCTGAGGTGACTTAGACTCC CTTGTTTTCTCATCTACCTGCAGCTTAGGTGACTTAGCAACTACAATCTTCCATGCATCCTCAATAGTTTCTATACCACT GCTCCCACCTCCCATGTCTTCCTCATCCTCTTCCATGCCAACCGGCGCTACCTCTTTCCCTCTGCTTGTTTCCCCTCTTG CATGATGGCCCTTGTTGGCATCCAGATGGATGGAAGAAGAAGCATGCTCAGCAAAGAGGTCATCGATGCGTACAGCAGGG ATGTTCTTTTTGCTATGCCTATGAACATGGTGGTTAGAAGCAGCATGTGGTGTTGTTCTAGAAGTGAGGGAATGCAAGGT CACAAGGAGCTGTTTATAGGTGGATTTGATGGCTTTAGGAATGTTGACCTTGTGTACTCTTGATTGCAGTCTGGTGGAGA AGCTCTTCCATGCTCTCTTAGCAGGTTGAAGCTTCTTTCCTAGCCTTAGACTTGACATCCTAGCAATCAATGGCTTTTTG GTTGGATAAGGGAGGGAGAGTTGGAAAGGGAAGTAATGGAATGGATTGGAGGAAGGTCCACTAAAGCTGGCGGAGGGCTA CAACTTAATTAGAAATGTTCTAGTGATGAAGGAAGCTTTGATGCAGTACTAATTTTATATAATTTCTTTCTTCTCAAACT CAAGTCCCAACTATATTTATGGTGTCACATTGGCACGTCATTTGTCAAGAGAATTACTGGAGTACCATTGGTTTGAATTA CTTTTTTCATGAATAAAAGTTTGGGTGCGTTTAGTTTCCCTCACCATCAT
CDS sequence (LotjaGi5g1v0190800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTACTGCATCAGCAACCTTTAAATCTAGGGAGGACCACAGAAAACAGATTGAATTGGAAGAGGCACGTAAAGCTGG GCTTGCACCAGCTGAGGTAGATGAAGATGGGAAAGAGATTAACCCTCATATCCCCCAATATATGTCTTCTGCTCCATGGT ATCTGAATGCTGAGAAACCTAGTCTAAAACATCAAAGGAAATGGAAATCTGATCCGAATTATACGAAGTCTTGGTACGAC AGAGGAGCAAAAACATTTCAGGCTGACAATTACAGGAAGGGAGCATGTGAAAACTGTGGTGCAATGACACATAATACAAA ATCATGCGTGGAGAGGCCTCGGAAGCTTGGAGCAAAATGGACCAACATGCATATCGCTCCTGATGAAAAGATAGAAACAT TTGAACTTGATTATGATGGCAAGAGAGATCGATGGAATGGTTATGATCCAGCCACCTATGCTCGTGTCATTGAAAGATAT GAGGCAAGGGAAGAGGCTCGGAGGAAGTATTTAAAAGAACAGCAATTAAAGAAACTGGAGAAGAAAAACAAAAAGCAAAG AGGGGAAAATGAGTCTAGTGATGATGATGAATATGAAGATGAAGATGCTCATGCTCTAAAGGTTGATGAAGCCAAGGTTG ATGAGAGCAAACAGGCGGACTTTGCCAAGGTTGAAAAGCGTGTTAGAACAACAGGAGGTGGTAGTACAGGAACTGTAAGA AACTTGCGTATCCGAGAGGACACTGCAAAATACCTTCTGAATCTTGATGTCAATTCTCCTTATTATGATCCAAAAACCCA TTCTATGCGAGAGGATCCCCTTCCTGATGCTGATCCTAATGAGAAGTTCTATGGAGGAGACAACCAGTATAGAATGAGTG GACAAGCTTTGGAGTTCAAGCAACTTAACATTCATGCCTGGGAAGCATTTGAGAAAGGCCAGGATGTCCACATACAAGCT GCACCTTCCCAAGCTGAATTACTATATAAGAATTTTAAGATAATGAAAGAGAAGTTGAAGTCACAAACAAAAGATGCCAT AATACAGAAGTATGGAAATGCAGCAGCCCAAGAAGAGCTTCCAAAGGAGCTTCTTTTGGGGCAAACTGAGAGACAAGTCG AATATGATCGCGCTGGCAGAATTATAAAAGGCCTGGAGGCATCCCTTCCAAAAAGCAAGTATGAAGAGGATGTGTACATT AATAATCACACAAGCATATGGGGTTCATGGTGGAATGATCATCAATGGGGATACAAATGTTGCAAGCAAACTATACGGAA CAGTTACTGCACTGGCGCAGCAGGAATTGAGGCTGCTGAGGCAGCAGCGGATTTAATGAAGGCAAACATTGATCGTAAAG TAGCATCTGAAGGCAAGTCTTCCTATTTAACCATTTTTAGAATACTCCTGCTCCAGCAGAGGAAAAAAGGCTTGCTACTT GGGGAACTGATGTACCTGATGATCTGGTCCTGGACCAGAAAAAACTTGATGAGGCCCTTAGAAAGGAGGATGAAAGGAAG AGGGAGGAAAAAGATGAAAGGAAACGCAAGTATAATGTTAGATGGAATGATGAGGTCACTCCTGAAGAGATGGAGGCATA TCGCGTGA
Protein sequence (LotjaGi5g1v0190800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATASATFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAEKPSLKHQRKWKSDPNYTKSWYD RGAKTFQADNYRKGACENCGAMTHNTKSCVERPRKLGAKWTNMHIAPDEKIETFELDYDGKRDRWNGYDPATYARVIERY EAREEARRKYLKEQQLKKLEKKNKKQRGENESSDDDEYEDEDAHALKVDEAKVDESKQADFAKVEKRVRTTGGGSTGTVR NLRIREDTAKYLLNLDVNSPYYDPKTHSMREDPLPDADPNEKFYGGDNQYRMSGQALEFKQLNIHAWEAFEKGQDVHIQA APSQAELLYKNFKIMKEKLKSQTKDAIIQKYGNAAAQEELPKELLLGQTERQVEYDRAGRIIKGLEASLPKSKYEEDVYI NNHTSIWGSWWNDHQWGYKCCKQTIRNSYCTGAAGIEAAEAAADLMKANIDRKVASEGKSSYLTIFRILLLQQRKKGLLL GELMYLMIWSWTRKNLMRPLERRMKGRGRKKMKGNASIMLDGMMRSLLKRWRHIA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 459 | 454 | 1.3E-204 | ||
| MobiDBLite | 22 | 42 | 21 | - | – | |
| MobiDBLite | 22 | 41 | 20 | - | – | |
| Pfam | 136 | 409 | 274 | 2.4E-94 | ||
| Coils | 162 | 196 | 35 | - | – | |
| MobiDBLite | 179 | 203 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Second spliceosomal transesterification activity | Catalysis of the second transesterification reaction of spliceosomal mRNA splicing. Ligation of the two exons occurs via a transesterification reaction where the free 3'-hydroxyl group of the 5' exon is the nucleophile attacking the 3' splice site. Non-expressed sequences are now detached from the exons. In cis splicing, the intron is in a lariat structure. | ||
| Biological process | MRNA splicing, via spliceosome | The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. | ||
| Molecular function | Pre-mRNA 3'-splice site binding | Interacting selectively and non-covalently with the pre-mRNA 3' splice site sequence. |
Expression pattern of LotjaGi5g1v0190800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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