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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Second spliceosomal transesterification activity | Catalysis of the second transesterification reaction of spliceosomal mRNA splicing. Ligation of the two exons occurs via a transesterification reaction where the free 3'-hydroxyl group of the 5' exon is the nucleophile attacking the 3' splice site. Non-expressed sequences are now detached from the exons. In cis splicing, the intron is in a lariat structure. | ||
| Biological process | MRNA splicing, via spliceosome | The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. | ||
| Molecular function | Pre-mRNA 3'-splice site binding | Interacting selectively and non-covalently with the pre-mRNA 3' splice site sequence. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: pre-mRNA-splicing factor SLU7-A-like [Glycine max] gi|356567955|ref|XP_003552180.1| | 6 | ||
| – | PREDICTED: pre-mRNA-splicing factor SLU7-like [Cucumis sativus] gi|449482878|ref|XP_004156430.1| | 6 | ||
| – | Pre-mRNA-splicing factor SLU7-like protein; TAIR: AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor; Swiss-Prot: sp|Q9SHY8|SLU7A_ARATH Pre-mRNA-splicing factor SLU7-A; TrEMBL-Plants: tr|A0A072UDN9|A0A072UDN9_MEDTR Pre-mRNA-splicing factor SLU7-like protein; Found in the gene: LotjaGi1g1v0210600 | 6 | ||
| – | Pre-mRNA-splicing factor SLU7-like protein; TAIR: AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor; Swiss-Prot: sp|Q9SHY8|SLU7A_ARATH Pre-mRNA-splicing factor SLU7-A; TrEMBL-Plants: tr|I1N2J3|I1N2J3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0210600 | 6 | ||
| – | Pre-mRNA-splicing factor SLU7; TAIR: AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor; Swiss-Prot: sp|Q9SHY8|SLU7A_ARATH Pre-mRNA-splicing factor SLU7-A; TrEMBL-Plants: tr|A0A0A0LFN9|A0A0A0LFN9_CUCSA Uncharacterized protein; Found in the gene: LotjaGi5g1v0190800 | 6 | ||
| – | Pre-mRNA-splicing factor SLU7-like protein; TAIR: AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor; Swiss-Prot: sp|A2YQU8|SLU7_ORYSI Pre-mRNA-splicing factor SLU7; TrEMBL-Plants: tr|A0A0A0LFN9|A0A0A0LFN9_CUCSA Uncharacterized protein; Found in the gene: LotjaGi5g1v0190800 | 6 | ||
| – | Pre-mRNA-splicing factor SLU7; TAIR: AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor; Swiss-Prot: sp|A2YQU8|SLU7_ORYSI Pre-mRNA-splicing factor SLU7; TrEMBL-Plants: tr|A0A0A0LFN9|A0A0A0LFN9_CUCSA Uncharacterized protein; Found in the gene: LotjaGi5g1v0190800 | 6 | ||
| – | Pre-mRNA-splicing factor SLU7; TAIR: AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor; Swiss-Prot: sp|Q9SHY8|SLU7A_ARATH Pre-mRNA-splicing factor SLU7-A; TrEMBL-Plants: tr|A0A0A0LFN9|A0A0A0LFN9_CUCSA Uncharacterized protein; Found in the gene: LotjaGi5g1v0190800 | 6 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 12.50 |