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Field | Value |
---|---|
Gene ID | LotjaGi6g1v0123700 |
Transcript ID | LotjaGi6g1v0123700.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q2RBN7|CLH1_ORYSJ Clathrin heavy chain 1; TrEMBL-Plants: tr|V7BP18|V7BP18_PHAVU Clathrin heavy chain; Found in the gene: LotjaGi6g1v0123700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:31595069..31607308) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAACACATTTTTAGAAAGGAACTTGATACTTGATAGTTCATTTCATTCCCATCACCACCTTCTCTCTCTGCTCATT CCACAACACTCTCCTTCTTCCTCTCCCCCTCTCTCTCTCTCATTGGCTTCGCTCACTGCTTCAGATCTCGCAGCGTAACA CTGCCTCTCCCCTTCCACCATGGCCGCAAACGCCCCCATTTCCATGAAAGAAGTCTTAACGGTGCGTCATTCCGCGTTTT CCGAGCTCTGATTTCGCCCCATCAGATCCCAATGTCACTCACCATTGTCACCGTTTCGTTTGATTCATCGACCTGTGGAT TCGATTTTTCATTTTTGTGATTGAAATTTTCATTTATTTTTTCTCCGATTTGGTGATCGTTTTTTTTTTTTTTTATCAAT GCAGCTGGGTAGCGTGGGAATCAACCCGCAATTCATCACGTTCACTCACGTGACGATGGAATCGGAGCAGTACATTTGCG TCAGGGAAACCGCTCCTCAGAACAGTGTTGTCATGATTGATATGAACATGCCCATGCAGCCTTTGAGACGCCCCATCACT GCTGATTCCGCTCTCATGAACCCTAACACCAGAATTCTCGCTCTCAAAGGTGAATTAACATTCTCTGATTTGTGTTACCT GTCAGCTCCTGGTCACAGATTCTGATAGTATTGATTCAATCATTGTGTTTGTTGATTGAAATTTCGGATCATGTCATTGT GATAGTTAATGGATTTGATAGCTGTAGGTAGTGTGCATATTTATATGTGTTTGGATTTTGGTTCCCCATTGAATGTGGTG TGGTGTTCTTCGTGCAGCTCAAGTTCCGGGCACTACTCAGGATCATTTGCAAGTGTTCAACATTGAAACGAAAACAAAGA TGAAATCATATCAAATGACCCAACAGGTGTGACTTTGTAGAATCTTCTTCCCGGATGATGGGTTGGATTGTATCTGTGAT TGTTAATTGTCTTGTGATTTGTCTCCTTTAGGTTGTTTTTTGGAAGTGGATAACCCCAAAGATGCTAGGTGTAGTCACTC AATCGTCTGTGTATCATTGGTCAATCGAAGGTAGAAAGTCTTTTTCTATTGTCCGTTTGTGTCTGTGATTCTATATAAAG TTGACAGTCGATCATCTTGTGCTTAGTTTGTACTCTAATTTGAATTTTTGTGAATTTAACGTTTTTACCATTTTTCATAT GTAGGTGATGGTGAGCCTGTCAAGGTGTTTGACCGAACAGCTAATATGGCAAATAACCAGATTATCAATTATCGTTGTGA TCCTAGTGAAAAGTGGCTGGTTTTGATTGGAATTGCTCCCGGTTCTCCTGAGGTGTGTGTTTCCTTTCGTATAGAAACTT TCCATCCCTTGCACTTTGTGGTATCACCAGTTCCCCTTACTGTATCTTTGTGTTTGTGTGTCAGCTCACTAAAAGGTAGC AAATTTTCTCAAATCCTATGCCATGGGTTGATTGTGACTATTTATCATGAGGAAATTTATATGAACTATTGAAATGTAGT CACTTAGTGCTATCCTTATATGTACACCTGGTATACCTAAATTACAGGATCGTAACAAACCTTTCCTATTCCTCTTTCTC ACCACAATATGTTACGCACTTGAATGACATTTGTGAAGGGTGCATGGATTTGTGATGTAAGTTGGTTGTTTCTAACTGAT ATTATGCCTAAATATATTATAGGATATATTATGCTTGTTTATGAAATACCTTCTGAATCACTCATGAGAAACAAAAATTT CATACTTCCTGTTGTGAATAATTTAATGATTTAGCCATTTTACTCTAATTGTCCTTTTTTTTATGTATACACAATATTGT GATATAAAAACATTGAAGTTTTTCTTATGATTATTTCAGTAAATTAGTCTCCCCTCCCTTGAGAGAAGCTTGAATTACAC TCCCCTCTTATTTCTAAATCTACACTGGCCTCCCCTAAGAGATAAATATATATATGCGCTTTAGTCCGTTTTAATATAAA TAGGCTTCTTATGGATATATTTTTTCTCTGTTTATGATTCTGTCATCATTAGTATATAGTTTTAAATCCTACTATAAATT ATGGGACATTTTAAAGATGAAATATATATTTCGGATGAAGTTTAGAAGCTGAAAAAAAAAAGTTTTAAACTTCATTTTAT CTTCTAAAATCAATATTCGTGTTTGAGCTCACCTTAAAATATTAAAGTGTGCAAAATTAGTTAGTGATGACAATGATTAT TGTAAAAGAAGAACAAATTTGCTAGGAGACATGTTCGTAGTTGTTCAAACCATTAAAAGATTCATTAATGCTAAAGTTTA CTAAATTGTTATATATATTATTATATTTAACTCTTATGAGAGGGGAGTGTATATTTTGGATTAAGACGGGATGGGAGTCT AATTCAAGCTTCTCTCAAGGGAGGGGAGAATAATTTACTCAAATAAATTTACTTGACCTTGTTTTCTAATTATTACGGGT GTGTTTGGGTTCAAGTTGAGATCAACTTGAAAGCACATTCAACCCAACGGAAATAAGGAGTTCCTTTCATTTTCGGGTTT TTTTGTAAAAATTGTCCCCTAACACTGTGAACTGAGAACCAGATACACACTCAATTGCTGGTTCAACTCTACATTTTCCT GAGTTTTTTTTTTTTCATTTATTACTTAATTTTTTTATTTTTGTTGTTTATATATAATCTTTTTCACTTTGAATTTTAGA AAATTTTCCTTACTGTGTTTACTAAATACAACGGTTTTTGACTTGTTGGTTCTCTTGCTTTTTTAGATATTTTAAATATA TTATCCTCCTTCAACTTTTTTTGCATACCTTATTAATGAAATCATTTTTTCTACATATGTTATGTAGTTATATTTTAAGA TTGGAAATTTTACAATTCTTTCTTTTTATGGTTTAAAATTCCCTGGTATTTCATCCTTTGACATGATTCGGATTGATTGC AGAAGATCAAACCTTCTGAAATGATTTATTACTGGATTAATGGTATTTTATATTGTTGGTTACAGAGGCCGCAACTAGTA AAAGGAAACATGCAACTCTTCTCTGTGGATCAACAACGGAGTCAGGCTCTTGAAGCGCATGCAGCCTCATTTGCCTCATT TAGAGTACTTGTCCCTTCTTTGTGATTTATTATTATGGATTTCAACTGTGTGGCTTGTAGGTTGAATGCTGTTTTTTTTT TGTAATTTATACAACATGTAGGTTACTGGCAATGATAAGGACTCGATTCTTATTTGTTTTGCATCAAAGAGCTTCAATGC TGGACAGGTTACATCGAAGATGCATGTCATTGAACTTGGTGCCCAGCCAGGTATGCATGGTTTTTTTTTTTTTTTTTTTT CTAAAAGTAGGTATGCATGGCTAGATTATCCTTTTTCAGCAAAAATACAGATTGTTAAGGATGATATTATTTTTTAGTAT TAATTTGATATATTAATAAAATAGGAGATAATGGGATATAAATCGGCGGAAGTTTACAATCTAATTACAAAACTTCCATT TGTTGTCAGGCAAGCCAACATTTACCAAAAAACAAGCAGATCTGTTCTTTCCTCCAGACTTTGCTGATGATTTTCCTGTG TCAATGCAGGTACAAGTTTAAACTTAAATTTGGATTCTCTATTCCCAATAGATATTATGTTAAATATTTGATTTGTTTTT ATTGTGCAGATTTCGAATAAATATGGCTTGATATATGTTATCACGAAACTTGGGCTTTTATTTGTCTATGATCTAGAGTC TGCCACTGCAGTTTACAGAAATCGAATCAGTCCGGATCCTATATTTTTGACCGCTGAAGCATCAACTGCAGGAGGCTTTT ATGCCATAAATAGACGTGGTCAGGTGTTGCTTGCTACTGTGAATGAGGCCACCATTGTGCCTTTTGTTAGCGGTCAGGTA TTTTACGTGTTACACCATTCTTGAATAGTTAGGAAAACTTTTTTTCGTACCTACTTCTAAATGTTTGTTTGGATATTGTG CAGTTAAATAATTTGGAACTTGCTGTTAATCTTGCTAAAAGAGGAAACCTCCCTGGTGCAGAGGAATTGGTAACTTGAGT TGCATTTGATTTATTATGTATTTTATTTATCTGTCATTTTAAAGTTTGTGTTCTGACCATGTACCAAAAAAAAGTTTGCG TTTTGATTATTGTTTCCAGAATTGGCTGACTCTCTGATGAGTCAGATAAATGCTTGACTAGAATTTTTTTTTCTATGCGT TCTGTCTCATAAATTGTAGTTGTCCTAAAAGCATCTCCGGAGTGTAATCTAGAGTAGAACAATTATCGTCAAGTCGATTA ACATAAAATACAAGAAAATGATGAACAATATATTATTTATTTTTGTGGCATCTGCTAGTACGATTTATTCTGTCAGAGAA TATCAGGATTGACACTCCACAGTTTGTAAGCTTACCACTACTTGTGGGAAATTTGGTCAAAAGAATACGAAAACCATGAT TTTTTTACCCTTTCATATAAATTTCATTAAAATTACTTTTGCATAAAGTTCGCCAAAACTGTGATGTTTTTCTTAGCTGA TTTCACCCATGGGAATCATTTTGCCCGTGATTGTAAGTTTCTGTCGATTTTCTTAGGTTGTTCAACGTTTTCAAGAGTTG TTTGCTCAGACCAAGTATAAGGAAGCTGCAGAGCTTGCTGCAGAATCACCACGGGGAATACTTCGTACTCCTGACACTGT TGCTAAATTTCAGGTATTATTTGCATTACATATGGTGGTCCATTCATATTTATTGGGTTTGTTAAGTTCATGCATTTGGT TTGTGGTGTGCTAATGAAATTGAGCCACCTTAATATGGAAATTTAATATGCTCTTCATGTCAAGTTCTTGATTCGCCCTT GTTAATTTTCTTCAGAGTGTTCCTGTGCAAGCTGGGCAAACGCCACCACTGTTGCAATACTTTGGAACTCTGTTAACCAG GGGAAAACTCAATGCTTTTGAATCGTTGGAACTGTCACGACTTGTCGTAAATCAGAACAAAAAGAATCTTTTGGAAAATT GGCTAGCAGAGGATAAGCTAGAATGCTGCGAGGAGCTTGGTGACCTTGTGAAGGTCCTGCAGAAATTTAATTTGTTTTCT CTTTTGTAATTGCACTTATTGATTTTTGTAGGTTTTTGGGAAGGAAATCTAAACTATCTTTTCTTTTCAAAGCAACTCAT TTCTGTTCCTTGATTTGTTTTTCATACTTCTTTCCTTTGTCTTTCAAATTATAATGAGACCGGCATATAATGCAGACGGT GGATAATGACCTTGCATTGAAAATCTACATCAAAGCTAGAGCCACACCAAAAGTTGTTGCAGCTTTTGCGGAGAGGAGGG AATTTGACAAGATCCTGATATATTCTAAGCAGGTAATTTTCTTATTTGGTTTAGTAGAATCACAAAAATAGTGATATGAA TCTTATATTGTATCTCATGTGTTGCTTGGCGTAATTTTGTATATAGTATATTTCTGATGCATTATTCTCTTTTTCTTTGC TGAAGGTTGGATACACACCTGATTACATGTTTCTTCTGCAAACAATTTTACGGACAGACCCACAGGTAAGCAGGTTATTT CTGAACATAATTTTGACTCACAAGTTACACTTCACTTCTGAATGGGTTCACTTTTGTGGTGCACAGTGCACTTATTTTTT TTCAAAGGTTTAAGCGTATCATTACTTAGAATTCGTTGCACCTCATGCATGGCTGTTAAATAGGTCCAAATGGAAATGGT TTCTTGATGCTTGTGATGTTTTCCTTTTAACAATATTTATATCGTGCTAATCTACTTTGAATTATTTATTTTTTTGAGCA TCTACATTGGTTTTTTTATTGGTGTGTAGCATAATACAAAACTTCCTTCATTGCAGGGTGCTGTAAATTTTGCTCTGATG ATGTCTCAAATGGAGGGAGGTTGCCCCGTTGACTACAACACAATAACTGATCTCTTTCTTCAGGTCTATTTGCAATTTAC TTTTTTTGTTTAATGGTACCTGGTTCGTTGTTCTCATACTATTTTTAACTTCGATGTAACTTAAAGAAGGCTGTATCATC GATCATGTACAAGTACAACATTTTTTTTCTCTCTCGTGGTGTTCATTCTGTTCTGTTTTCAAATTTTAAACTGAGAAAAG ATAATAATGATATGAAACCTAACCTCTCTTGAAAGTTGAAACTGGTTTTGGTATGCTTTTTGACAATTTTTGGCTAACAT CTTTTCCTATAATATCAATAACTGAGAATTATTTGTTAAAGCAAGAAACAATTTTACCCTTCTTTTTGTGTGGGCTGGAA CCTTTTCTTTATATTTTTCTTCTGCTACTTTTTAGAGAAATTTGATCCGTGAGGCAACAGCTTTTTTGTTGGATGTGCTG AAGCCAAATCTGCCTGAACATGGATATCTTCAAACAAAGGTTCTTTTATTTTATGCGCTGTTTATGTTTCCCTGAACTTA ACAGTATTGCATATAGTTTTTTTTAAAAGAAAAACATGATGATACTCAATATATTGTTTTAGGTTCTGGAAATTAATCTT GTGACGTTTCCAAATGTTGCTGATGCCATATTGGCCAATGGCATGTTTAGTCATTATGATCGCCCACGCATTGGACAACT CTGTGAAAAGGCGGGGCTGTTCATACGGGCTCTTCAGGTTCTTGACTTTTCTAATTGACTAATTCTGATGCAATACTGAC TGACTAAGTGGCGTTCCTTGTGAGAATAATTTCTTGAACCTTGTATTTGTTATGTGCAGCATTATTCTGAGTTGCCTGAT ATCAAACGTGTTATTGTGAATACACATGCCATTGAGCCACAGGTATGGATTGCAATTGCTCAAATGACCTAATCTATCAT AAAACCATTTTACATTCTGAATATATGATGCTTTGCAGGCTTTAGTTGAGTTCTTTGGAACCCTTTCCCGAGAATGGGCA CTTGAATGTATGAAAGATCTTTTATTGGTCAATCTTAGGGGCAATCTTCAAATAATTGTGCAGGTACTGTTTTTGATAAT GTTGCCATTAGGCAGTTTTTTATTCCATAAGTCGATTATTAGAGAATCTTATTTGCATTTTGCATGATTTTTAGACTGCT AAGGAATATTCTGAGCAGCTGGGAGTTGATGCATGTATTAAACTCTTTGAGAATTTCAAATCCTATGAAGGACTGTACTT TTTCTTGGGTGCATACTTGAGCTCCAGGTATTTCATATTAAAGAATGAGTTACCTTAGTTCACTTGACAGTCTGCTTTGG TTTTCTAGTTTTCTTTCAATTATTGTAATTTACCTTTTTATTCTTTCTTGTATAGTGAGGATCCTGATATTCACTTCAAG TACATTGAAGCTGCTGCTAAAACTGGACAACTTAAGGAGGTAGAGCGTGTGACTCGGGAATCGAATTTTTATGATGCTGA GAAGACAAAGAATTTTCTAATGGAAGCCAAGCTTCCAGATGCACGTCCACTAATTAATGTGTGCGATCGTTTTGGTTTTG TTCCGGATCTTACCCATTATCTTTATACTAACAACATGCTTCGCTATATTGAAGGTTATGTTCAAAAGGTAACTTTGTTT CAGGATTCTATTCAATTTTTGTGATTCATAGGATACGGGTGTGTTTTAAATCTAACAAAATTTTAAGACTAATATTTAAT TATTACACTTCTCGCTTTTAGGTCAATCCTGGAAATGCTCCTCTAGTTGTAGGACAGTTGTTAGATGATGAATGCCCTGA AGATTTCATTAAAGGTCTCATACTTTCAGTTCGTTCTCTTCTGCCAGTTGAGCCTTTAGTTGAAGAATGTGAGAAGAGGT GTGCTAGTTTTCTTTCTACCTTTCTTTTCCAAAGTCATTGCCATACTCTTTCTCATATCACTTGTTTTGCATAGGAATCG TCTCCGCTTACTGACTCAGTTCCTGGAGCATCTTGTAAGTGAAGGAAGTCAGGATGTACATGTACATAATGCGCTGGGTA AAATCATCATTGACAGCAACAACAATCCTGAGCATTTTCTCACAACCAACCCATATTATGACTCTCGAGTTGTTGGTAAA TATTGCGAGAAGCGGGATCCTACCCTTGCTGTTGTTGCTTATCGAAGAGGGCAATGTGATGATGAGCTAGTTAATGTAAC TAATAAAAATTCCTTGTTCAAACTCCAAGCAAGGTATGTATATTGTCCTTCATAAGGAAGATATCATTATGTTTTATAAT ACTAATTTGAGTCACTCGTGTTATTTTTTTTTTTCAGATATGTTGTGGAAAGGATGGACTCTGACCTCTGGGAGAAAGTT CTTAATCCTGAGAATGAGTTCAGAAGGTTGTTGATTGATCAAGTGGTGTCTACTGCTTTGCCTGAAAGCAAGAGTCCTGA ACAAGTTTCAGCTGCAGTGAAAGCTTTTATGACTGCCGACCTCCCACATGAGTTAATTGAGCTTCTTGAAAAGATTGTGC TACAAAATTCTGCTTTTAGTGGAAACTTTAATTTGCAAAATTTGCTGATCCTTACTGCAATCAAGGCAGATCCTTCTAGA GTTATGGATTACATAAACAGGTTGGACAACTTTGATGGGCCTGCAGTAGGGGAGGTGGCAGTGGAAGCACAGCTATATGA AGAAGCATTTGCTATTTTCAAGAAATTCAATTTGAATGTTCAGGCTGTTAATGTCCTGCTGGATAACCTTCAAACTATTG ATCGTGCTGTGGAATTTGCTTTCCGGGTTGAAGAGGATGCTGTTTGGACCCAGGTGGCCAAGGCGCAATTAAGAGAAGGA TTGGTGAGTGATGCTATTGAGTCCTTCATTCGTGCAGATGATGCAACTCATTTCTTAGAAGTTATAAAGGCTGCTGAAGA TGCAGATGTATACCATGACCTGGTAAAGTACCTTCTCATGGTTAGACAGAAGACCAAAGAGCCCAAGGTGGACAGTGAGC TCATTTATGCTTATGCTAAGATTGATCGGCTTGGAGAAATTGAAGAGTTCATACTTATGCCAAATGTTGCCAATTTGCCG AATGTTGGAGACCGCTTGTATGATGAGGCTCTTTATGAGGCTGCAAAAATTATATTTGCTTTTATATCTAACTGGGCTAA GTTAGCAGTAACATTAGTAAAGCTTAAACAGTTCCAGGGCGCTGTTGATGCTGCCCGGAAGGCAAACAGCGCAAAAACTT GGAAGGAAGTTTGTTTTGCTTGTGTTGATAATGAGGAGTTCCGCTTAGCTCAGATTTGTGGTCTCAATGTCATCATTCAG GTGACACTCTTTTCTTGTATATAAGTTGACATTTTGAATTTTTTTTCTCATGAAGATTGATTTCCGCCACTTCACTTCAA AAAATTTCTGTAATTTTTGTGATACATGGAAACGTTTAAATGCAAGTTAAATGATGCACTGCTGCTAAATACTTAAAACA AGTAGCTCACAAACTGTTGATTACTTTATCTAACTTTTTGAAGTTTTCTGATTACATACTGTATTGTTATGAAGGTGGAT GATTTGGAGGAGGTTAGTGAGTATTATCAGAACAGAGGATGCTTCAATGAGCTCATATCTCTAATGGAGAGTGGGCTAGG ATTGGAACGTGCTCATATGGGTATCTTTACTGAATTGGGAGTTCTTTATGCAAGATATCGTGAAGAGAAGCTAATGGAAC ACATTAAGTTGTTCTCAACTAGGCTTAACATTCCAAAGCTTATTCGGGCATGTGATGAACAACAACACTGGAAAGAACTT ACATACTTATACATCCAATATGATGAGTTTGATAATGCTGCTACCACTGTCATGAATCACTCTCCAGAATCTTGGGACCA TATGCAATTCAAAGATATCATAGTTAAAATTGCCAGTGTGGAACTCTACTATAAGGCTGTTCACTTCTACTTGCAAGAAC ATCCTGATGTAATAAATGATCTTCTAAATGTGATTGCTCTTCGTGTGGACCATACCCGTGTAGTAGATATAATGAGGAAG GTGTGCATGTCTTATTCCCTATAGCCAAATTCCTACTGTATAATCTTATTTTGTTAAATATCCAATTGGCTTTAAACATC TTTTATAATAACATTGTTTGTGATTTTTAATTTTTAGGCTGGCCACCTCAAATTAGTCAAGCCGTACATGGTTGCAGTCC AAAGCAATAATGTGTTTGCTGTGAATGAAGCTCTGAATGAAATATATGTTGAGGAAGAGGACTATGATAGACTTCGAGAA TCAACAGATCTGCATGACAATTTCGATCAGATAGGTCTTGCACAGAAGGTGAATCCTGTCTATCTTTTATCTTATTTAAA AAATTTAGTAAAAATTAAGATGTGGATGTTTCTGAGAAATCCAAAGTGTTTGTATATTATTAACTGGCTTCAACAATACA CTTGAGCAGATTGAGAAGCATGAACTTCTTGAGATGAGGCGTGTTGCTGCATACATTTATAAGAAAGCAGGAAGATGGAA GCAATCCATTGCTTTGTCAAAGAAAGACAATCTTTACAAGGACTGTATGGAGACTTGCTCTCAATCTGGGGATCGTGAAC TCTCCGAAGATTTGCTTGTCTACTTTATTGAGAAGGTGGTTATTTTCTTGTCCTTTTTTGTTAAGTTTTGAACTCCAGTA TTTAAGGATTAGATACTAAATAGGCTAGGCCCTTTTGGGACAGTGCAGTTTGACTCCTGCTTCACTTTAAAATAATTTTG TTTTTTTCTATCTAGAGCCCATTATTGGTTTCTTCCGCTTGCTTCCTGCACTAGTTCTTTTCCGTTAATTTTTACAAAGG AATATATTGATATTTCTGCAGGGGAAGAAAGAGTGTTTTGCATCATGCCTCTTTGTCTGTTATGATATCATACGGCCAGA TGTTGCTCTTGAGTTAGCTTGGATGAACAACATACTTGATTTCGCTTTCCCGTATCTTCTACAGGTATGTTTTTGTTTGG GTCCCTTAATTAAATTTATTGAAAAGAAATTTGTTCTTTTATTGTTAACTGTCTTTGCTTAATTCTTTGAAGTTTATTCG AGAGTATACAAGCAAGGTAGATGAGCTTATCAAGGACAAAATTGAGGCACAAAATGAGGAGAAAGCAAAGGAGAAGGAGG AAAAGGACGTAATTGCTCAACAGGTACCTGTTACTAATTTCCTTTTATAAGACCATCAGTTTTATATTCTGTTTGATTAT TCGATTAACATTTTTCAATGATCTCCAGAATATGTATTCCCAGTTGTTACCACTTGCTTTGCCAGCACCACCGATGCCAG GGATGCCAGGAATGGGGGGAGGATACGGCCCTCCACCACCTCCGCCAATGGGCGGAATGGGTGGAATGGGGATGCCGCCA ATGCCTCCTTTTGGCATGCCCCCAAGCTACTGAGTTGACAACCAAGGAGAGGAGTTCAGCATAAATTTTGCTGGTGAAGT TAGTTGAGAATGTTTCATTTTTGCATTCAGGGTTACTTCCTTAGGGTTAAAGAATTTCACGTGGTGGCACCAAGCATCTG CTGTCTGGCTTGCTACTACTTTCCAATGATTGCGGCTTTCTGCACTTAAAGTTTTGAGTTCTTATTCTTTTGCTTTCTTT CTCTTGTTGTTTGATCATTCTTGTGGGAGCCAAGGGTGGTCACTTGATCCTGGTGGATCTTTTTTATTCTTTGGCTTGGT TGTGACATGTATAGTTTATTTTCTCTAATTATTATTTGTTTACGTAGTGATGTAGTCATAAATGTATTCTGTCTAGGACT TAATTGTTCTTTATGGTATATAAACATTTACCTAATATTGAAATTGGTCTCTAATTAGGACTTGAATGTTCTGAATTCTG AATATATATTTTAATTCCACCACTCTAGTTCCATTATTATTCATGTTAAAACGTTAAAATACAGTTTAAGCAGAGTTTGG CCTAATCCAGAGGTTCCAATCTCAATCACTTAGCACTCTTTAGGTAGCAGAGAGGGGAGAAGCGAAGTAGGGTGGTTGAA GTCTATGTTAGGAGAAGGAAGGTAGAAATAGGGGTAAACTGAAAAGAAAAAAAAAAAGGCTTAAATAAGTTTTTGGTCCC TAACCTTTACCAAGTGCTTGGTTTTCGTCCCTCGTCGGAGCAAAGGTGGGTTTTAATCCCTAACCTTTGCCACAAGATTT GGTTTTCATCCCTCCGGAGCTCTGGGTCAACGCCGGAGCTCCGGTGGCCCATGTGGCATGGCCACGTGGGATTAATGAGC
CDS sequence (LotjaGi6g1v0123700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGCAAACGCCCCCATTTCCATGAAAGAAGTCTTAACGCTGGGTAGCGTGGGAATCAACCCGCAATTCATCACGTT CACTCACGTGACGATGGAATCGGAGCAGTACATTTGCGTCAGGGAAACCGCTCCTCAGAACAGTGTTGTCATGATTGATA TGAACATGCCCATGCAGCCTTTGAGACGCCCCATCACTGCTGATTCCGCTCTCATGAACCCTAACACCAGAATTCTCGCT CTCAAAGCTCAAGTTCCGGGCACTACTCAGGATCATTTGCAAGTGTTCAACATTGAAACGAAAACAAAGATGAAATCATA TCAAATGACCCAACAGGTTGTTTTTTGGAAGTGGATAACCCCAAAGATGCTAGGTGTAGTCACTCAATCGTCTGTGTATC ATTGGTCAATCGAAGGTGATGGTGAGCCTGTCAAGGTGTTTGACCGAACAGCTAATATGGCAAATAACCAGATTATCAAT TATCGTTGTGATCCTAGTGAAAAGTGGCTGGTTTTGATTGGAATTGCTCCCGGTTCTCCTGAGAGGCCGCAACTAGTAAA AGGAAACATGCAACTCTTCTCTGTGGATCAACAACGGAGTCAGGCTCTTGAAGCGCATGCAGCCTCATTTGCCTCATTTA GAGTTACTGGCAATGATAAGGACTCGATTCTTATTTGTTTTGCATCAAAGAGCTTCAATGCTGGACAGGTTACATCGAAG ATGCATGTCATTGAACTTGGTGCCCAGCCAGGCAAGCCAACATTTACCAAAAAACAAGCAGATCTGTTCTTTCCTCCAGA CTTTGCTGATGATTTTCCTGTGTCAATGCAGATTTCGAATAAATATGGCTTGATATATGTTATCACGAAACTTGGGCTTT TATTTGTCTATGATCTAGAGTCTGCCACTGCAGTTTACAGAAATCGAATCAGTCCGGATCCTATATTTTTGACCGCTGAA GCATCAACTGCAGGAGGCTTTTATGCCATAAATAGACGTGGTCAGGTGTTGCTTGCTACTGTGAATGAGGCCACCATTGT GCCTTTTGTTAGCGGTCAGTTAAATAATTTGGAACTTGCTGTTAATCTTGCTAAAAGAGGAAACCTCCCTGGTGCAGAGG AATTGGTTGTTCAACGTTTTCAAGAGTTGTTTGCTCAGACCAAGTATAAGGAAGCTGCAGAGCTTGCTGCAGAATCACCA CGGGGAATACTTCGTACTCCTGACACTGTTGCTAAATTTCAGAGTGTTCCTGTGCAAGCTGGGCAAACGCCACCACTGTT GCAATACTTTGGAACTCTGTTAACCAGGGGAAAACTCAATGCTTTTGAATCGTTGGAACTGTCACGACTTGTCGTAAATC AGAACAAAAAGAATCTTTTGGAAAATTGGCTAGCAGAGGATAAGCTAGAATGCTGCGAGGAGCTTGGTGACCTTGTGAAG ACGGTGGATAATGACCTTGCATTGAAAATCTACATCAAAGCTAGAGCCACACCAAAAGTTGTTGCAGCTTTTGCGGAGAG GAGGGAATTTGACAAGATCCTGATATATTCTAAGCAGGTTGGATACACACCTGATTACATGTTTCTTCTGCAAACAATTT TACGGACAGACCCACAGGGTGCTGTAAATTTTGCTCTGATGATGTCTCAAATGGAGGGAGGTTGCCCCGTTGACTACAAC ACAATAACTGATCTCTTTCTTCAGAGAAATTTGATCCGTGAGGCAACAGCTTTTTTGTTGGATGTGCTGAAGCCAAATCT GCCTGAACATGGATATCTTCAAACAAAGGTTCTGGAAATTAATCTTGTGACGTTTCCAAATGTTGCTGATGCCATATTGG CCAATGGCATGTTTAGTCATTATGATCGCCCACGCATTGGACAACTCTGTGAAAAGGCGGGGCTGTTCATACGGGCTCTT CAGCATTATTCTGAGTTGCCTGATATCAAACGTGTTATTGTGAATACACATGCCATTGAGCCACAGGCTTTAGTTGAGTT CTTTGGAACCCTTTCCCGAGAATGGGCACTTGAATGTATGAAAGATCTTTTATTGGTCAATCTTAGGGGCAATCTTCAAA TAATTGTGCAGACTGCTAAGGAATATTCTGAGCAGCTGGGAGTTGATGCATGTATTAAACTCTTTGAGAATTTCAAATCC TATGAAGGACTGTACTTTTTCTTGGGTGCATACTTGAGCTCCAGTGAGGATCCTGATATTCACTTCAAGTACATTGAAGC TGCTGCTAAAACTGGACAACTTAAGGAGGTAGAGCGTGTGACTCGGGAATCGAATTTTTATGATGCTGAGAAGACAAAGA ATTTTCTAATGGAAGCCAAGCTTCCAGATGCACGTCCACTAATTAATGTGTGCGATCGTTTTGGTTTTGTTCCGGATCTT ACCCATTATCTTTATACTAACAACATGCTTCGCTATATTGAAGGTTATGTTCAAAAGGTCAATCCTGGAAATGCTCCTCT AGTTGTAGGACAGTTGTTAGATGATGAATGCCCTGAAGATTTCATTAAAGGTCTCATACTTTCAGTTCGTTCTCTTCTGC CAGTTGAGCCTTTAGTTGAAGAATGTGAGAAGAGGAATCGTCTCCGCTTACTGACTCAGTTCCTGGAGCATCTTGTAAGT GAAGGAAGTCAGGATGTACATGTACATAATGCGCTGGGTAAAATCATCATTGACAGCAACAACAATCCTGAGCATTTTCT CACAACCAACCCATATTATGACTCTCGAGTTGTTGGTAAATATTGCGAGAAGCGGGATCCTACCCTTGCTGTTGTTGCTT ATCGAAGAGGGCAATGTGATGATGAGCTAGTTAATGTAACTAATAAAAATTCCTTGTTCAAACTCCAAGCAAGATATGTT GTGGAAAGGATGGACTCTGACCTCTGGGAGAAAGTTCTTAATCCTGAGAATGAGTTCAGAAGGTTGTTGATTGATCAAGT GGTGTCTACTGCTTTGCCTGAAAGCAAGAGTCCTGAACAAGTTTCAGCTGCAGTGAAAGCTTTTATGACTGCCGACCTCC CACATGAGTTAATTGAGCTTCTTGAAAAGATTGTGCTACAAAATTCTGCTTTTAGTGGAAACTTTAATTTGCAAAATTTG CTGATCCTTACTGCAATCAAGGCAGATCCTTCTAGAGTTATGGATTACATAAACAGGTTGGACAACTTTGATGGGCCTGC AGTAGGGGAGGTGGCAGTGGAAGCACAGCTATATGAAGAAGCATTTGCTATTTTCAAGAAATTCAATTTGAATGTTCAGG CTGTTAATGTCCTGCTGGATAACCTTCAAACTATTGATCGTGCTGTGGAATTTGCTTTCCGGGTTGAAGAGGATGCTGTT TGGACCCAGGTGGCCAAGGCGCAATTAAGAGAAGGATTGGTGAGTGATGCTATTGAGTCCTTCATTCGTGCAGATGATGC AACTCATTTCTTAGAAGTTATAAAGGCTGCTGAAGATGCAGATGTATACCATGACCTGGTAAAGTACCTTCTCATGGTTA GACAGAAGACCAAAGAGCCCAAGGTGGACAGTGAGCTCATTTATGCTTATGCTAAGATTGATCGGCTTGGAGAAATTGAA GAGTTCATACTTATGCCAAATGTTGCCAATTTGCCGAATGTTGGAGACCGCTTGTATGATGAGGCTCTTTATGAGGCTGC AAAAATTATATTTGCTTTTATATCTAACTGGGCTAAGTTAGCAGTAACATTAGTAAAGCTTAAACAGTTCCAGGGCGCTG TTGATGCTGCCCGGAAGGCAAACAGCGCAAAAACTTGGAAGGAAGTTTGTTTTGCTTGTGTTGATAATGAGGAGTTCCGC TTAGCTCAGATTTGTGGTCTCAATGTCATCATTCAGGTGGATGATTTGGAGGAGGTTAGTGAGTATTATCAGAACAGAGG ATGCTTCAATGAGCTCATATCTCTAATGGAGAGTGGGCTAGGATTGGAACGTGCTCATATGGGTATCTTTACTGAATTGG GAGTTCTTTATGCAAGATATCGTGAAGAGAAGCTAATGGAACACATTAAGTTGTTCTCAACTAGGCTTAACATTCCAAAG CTTATTCGGGCATGTGATGAACAACAACACTGGAAAGAACTTACATACTTATACATCCAATATGATGAGTTTGATAATGC TGCTACCACTGTCATGAATCACTCTCCAGAATCTTGGGACCATATGCAATTCAAAGATATCATAGTTAAAATTGCCAGTG TGGAACTCTACTATAAGGCTGTTCACTTCTACTTGCAAGAACATCCTGATGTAATAAATGATCTTCTAAATGTGATTGCT CTTCGTGTGGACCATACCCGTGTAGTAGATATAATGAGGAAGGCTGGCCACCTCAAATTAGTCAAGCCGTACATGGTTGC AGTCCAAAGCAATAATGTGTTTGCTGTGAATGAAGCTCTGAATGAAATATATGTTGAGGAAGAGGACTATGATAGACTTC GAGAATCAACAGATCTGCATGACAATTTCGATCAGATAGGTCTTGCACAGAAGATTGAGAAGCATGAACTTCTTGAGATG AGGCGTGTTGCTGCATACATTTATAAGAAAGCAGGAAGATGGAAGCAATCCATTGCTTTGTCAAAGAAAGACAATCTTTA CAAGGACTGTATGGAGACTTGCTCTCAATCTGGGGATCGTGAACTCTCCGAAGATTTGCTTGTCTACTTTATTGAGAAGG GGAAGAAAGAGTGTTTTGCATCATGCCTCTTTGTCTGTTATGATATCATACGGCCAGATGTTGCTCTTGAGTTAGCTTGG ATGAACAACATACTTGATTTCGCTTTCCCGTATCTTCTACAGTTTATTCGAGAGTATACAAGCAAGGTAGATGAGCTTAT CAAGGACAAAATTGAGGCACAAAATGAGGAGAAAGCAAAGGAGAAGGAGGAAAAGGACGTAATTGCTCAACAGAATATGT ATTCCCAGTTGTTACCACTTGCTTTGCCAGCACCACCGATGCCAGGGATGCCAGGAATGGGGGGAGGATACGGCCCTCCA CCACCTCCGCCAATGGGCGGAATGGGTGGAATGGGGATGCCGCCAATGCCTCCTTTTGGCATGCCCCCAAGCTACTGA
Protein sequence (LotjaGi6g1v0123700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAANAPISMKEVLTLGSVGINPQFITFTHVTMESEQYICVRETAPQNSVVMIDMNMPMQPLRRPITADSALMNPNTRILA LKAQVPGTTQDHLQVFNIETKTKMKSYQMTQQVVFWKWITPKMLGVVTQSSVYHWSIEGDGEPVKVFDRTANMANNQIIN YRCDPSEKWLVLIGIAPGSPERPQLVKGNMQLFSVDQQRSQALEAHAASFASFRVTGNDKDSILICFASKSFNAGQVTSK MHVIELGAQPGKPTFTKKQADLFFPPDFADDFPVSMQISNKYGLIYVITKLGLLFVYDLESATAVYRNRISPDPIFLTAE ASTAGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLELAVNLAKRGNLPGAEELVVQRFQELFAQTKYKEAAELAAESP RGILRTPDTVAKFQSVPVQAGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECCEELGDLVK TVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYMFLLQTILRTDPQGAVNFALMMSQMEGGCPVDYN TITDLFLQRNLIREATAFLLDVLKPNLPEHGYLQTKVLEINLVTFPNVADAILANGMFSHYDRPRIGQLCEKAGLFIRAL QHYSELPDIKRVIVNTHAIEPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQTAKEYSEQLGVDACIKLFENFKS YEGLYFFLGAYLSSSEDPDIHFKYIEAAAKTGQLKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDL THYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVS EGSQDVHVHNALGKIIIDSNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELVNVTNKNSLFKLQARYV VERMDSDLWEKVLNPENEFRRLLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNL LILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYEEAFAIFKKFNLNVQAVNVLLDNLQTIDRAVEFAFRVEEDAV WTQVAKAQLREGLVSDAIESFIRADDATHFLEVIKAAEDADVYHDLVKYLLMVRQKTKEPKVDSELIYAYAKIDRLGEIE EFILMPNVANLPNVGDRLYDEALYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAARKANSAKTWKEVCFACVDNEEFR LAQICGLNVIIQVDDLEEVSEYYQNRGCFNELISLMESGLGLERAHMGIFTELGVLYARYREEKLMEHIKLFSTRLNIPK LIRACDEQQHWKELTYLYIQYDEFDNAATTVMNHSPESWDHMQFKDIIVKIASVELYYKAVHFYLQEHPDVINDLLNVIA LRVDHTRVVDIMRKAGHLKLVKPYMVAVQSNNVFAVNEALNEIYVEEEDYDRLRESTDLHDNFDQIGLAQKIEKHELLEM RRVAAYIYKKAGRWKQSIALSKKDNLYKDCMETCSQSGDRELSEDLLVYFIEKGKKECFASCLFVCYDIIRPDVALELAW MNNILDFAFPYLLQFIREYTSKVDELIKDKIEAQNEEKAKEKEEKDVIAQQNMYSQLLPLALPAPPMPGMPGMGGGYGPP PPPPMGGMGGMGMPPMPPFGMPPSY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 1 | 376 | 376 | 6.2E-155 | ||
PIRSF | 2 | 1685 | 1684 | 0.0 | ||
PANTHER | 3 | 1703 | 1701 | 0.0 | – | |
PANTHER | 3 | 1703 | 1701 | 0.0 | – | |
SUPERFAMILY | 4 | 342 | 339 | 2.88E-128 | ||
Pfam | 19 | 55 | 37 | 1.9E-4 | ||
Pfam | 154 | 196 | 43 | 7.7E-10 | ||
Pfam | 343 | 366 | 24 | 1.1E-8 | ||
SUPERFAMILY | 344 | 499 | 156 | 7.48E-53 | ||
Pfam | 368 | 433 | 66 | 7.2E-30 | – | |
SUPERFAMILY | 456 | 792 | 337 | 1.29E-83 | ||
Gene3D | 458 | 788 | 331 | 4.2E-16 | ||
ProSiteProfiles | 550 | 696 | 147 | 36.229 | ||
SMART | 550 | 692 | 143 | 4.1E-34 | ||
Pfam | 556 | 689 | 134 | 5.6E-21 | ||
ProSiteProfiles | 699 | 841 | 143 | 33.766 | ||
SMART | 699 | 841 | 143 | 2.3E-38 | ||
Pfam | 700 | 839 | 140 | 9.0E-21 | ||
ProSiteProfiles | 846 | 985 | 140 | 37.674 | ||
SMART | 846 | 985 | 140 | 3.6E-42 | ||
Pfam | 849 | 974 | 126 | 1.4E-28 | ||
SUPERFAMILY | 900 | 1065 | 166 | 2.27E-36 | ||
Pfam | 992 | 1131 | 140 | 1.3E-31 | ||
SMART | 992 | 1137 | 146 | 2.4E-42 | ||
ProSiteProfiles | 992 | 1137 | 146 | 42.182 | ||
Gene3D | 1051 | 1195 | 145 | 1.3E-36 | ||
SUPERFAMILY | 1052 | 1194 | 143 | 4.6E-28 | ||
SMART | 1141 | 1282 | 142 | 1.5E-38 | ||
ProSiteProfiles | 1141 | 1282 | 142 | 35.901 | ||
Pfam | 1144 | 1280 | 137 | 8.7E-28 | ||
SUPERFAMILY | 1195 | 1530 | 336 | 1.38E-103 | ||
Gene3D | 1196 | 1535 | 340 | 5.0E-149 | ||
SMART | 1287 | 1433 | 147 | 5.2E-42 | ||
ProSiteProfiles | 1287 | 1433 | 147 | 41.525 | ||
Pfam | 1288 | 1430 | 143 | 5.2E-28 | ||
ProSiteProfiles | 1436 | 1579 | 144 | 37.683 | ||
SMART | 1436 | 1595 | 160 | 1.2E-42 | ||
Pfam | 1438 | 1578 | 141 | 1.6E-26 | ||
Coils | 1476 | 1496 | 21 | - | – | |
Gene3D | 1541 | 1640 | 100 | 9.7E-39 | – | |
Coils | 1616 | 1653 | 38 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Structural molecule activity | The action of a molecule that contributes to the structural integrity of a complex or its assembly within or outside a cell. | ||
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. | ||
Cellular component | Clathrin coat of trans-Golgi network vesicle | A clathrin coat found on a vesicle of the trans-Golgi network. | ||
Cellular component | Clathrin coat of coated pit | The coat found on coated pits and the coated vesicles derived from coated pits; comprises clathrin and the AP-2 adaptor complex. | ||
Molecular function | Clathrin light chain binding | Interacting selectively and non-covalently with a clathrin light chain. | ||
Cellular component | Clathrin complex | A protein complex that consists of three clathrin heavy chains and three clathrin light chains, organized into a symmetrical three-legged structure called a triskelion. In clathrin-coated vesicles clathrin is the main component of the coat and forms a polymeric mechanical scaffold on the vesicle surface. |
Expression pattern of LotjaGi6g1v0123700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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