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PIRSF002290

Source: PIRSF

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016192
Biological process Vesicle-mediated transport A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
Subterm of
GO:0032051
Molecular function Clathrin light chain binding Interacting selectively and non-covalently with a clathrin light chain.
Subterm of
GO:0071439
Cellular component Clathrin complex A protein complex that consists of three clathrin heavy chains and three clathrin light chains, organized into a symmetrical three-legged structure called a triskelion. In clathrin-coated vesicles clathrin is the main component of the coat and forms a polymeric mechanical scaffold on the vesicle surface.
Subterm of
Part of

Associated Lotus transcripts 16

Transcript Name Description Predicted domains Domain count
Lj0g3v0267479.1
– PREDICTED: clathrin heavy chain 1-like [Glycine max] gi|356495434|ref|XP_003516582.1|
Domains
20
Lj2g3v2771110.1
– PREDICTED: clathrin heavy chain 2-like [Cicer arietinum] gi|502097571|ref|XP_004491025.1|
Domains
21
Lj6g3v0497300.1
– PREDICTED: clathrin heavy chain 1-like [Glycine max] gi|356539985|ref|XP_003538472.1|
Domains
13
Lj6g3v0497300.2
– PREDICTED: clathrin heavy chain 1-like [Glycine max] gi|356539985|ref|XP_003538472.1|
Domains
22
LotjaGi1g1v0076400.1
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400
Domains
22
LotjaGi1g1v0076400.2
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400
Domains
21
LotjaGi1g1v0076400.3
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400
Domains
22
LotjaGi1g1v0076400.4
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400
Domains
22
LotjaGi1g1v0076400.5
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400
Domains
22
LotjaGi1g1v0076400.6
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400
Domains
22
LotjaGi1g1v0076400.7
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400
Domains
20
LotjaGi6g1v0076900.1
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|X4Z1M5|X4Z1M5_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi6g1v0076900
Domains
22
LotjaGi6g1v0076900.2
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|X4Z1M5|X4Z1M5_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi6g1v0076900
Domains
22
LotjaGi6g1v0076900.3
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|X4Z1M5|X4Z1M5_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi6g1v0076900
Domains
21
LotjaGi6g1v0123700.1
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q2RBN7|CLH1_ORYSJ Clathrin heavy chain 1; TrEMBL-Plants: tr|V7BP18|V7BP18_PHAVU Clathrin heavy chain; Found in the gene: LotjaGi6g1v0123700
Domains
22
LotjaGi6g1v0123700.2
– Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q2QYW2|CLH2_ORYSJ Clathrin heavy chain 2; TrEMBL-Plants: tr|V7BP18|V7BP18_PHAVU Clathrin heavy chain; Found in the gene: LotjaGi6g1v0123700
Domains
21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF50989 SUPERFAMILY 1 6.25