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Field | Value |
---|---|
Gene ID | LotjaGi6g1v0256100 |
Transcript ID | LotjaGi6g1v0256100.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Beta xylosidase; TAIR: AT5G49360.1 beta-xylosidase 1; Swiss-Prot: sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1; TrEMBL-Plants: tr|A0A1J7FUN8|A0A1J7FUN8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0256100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:56891640..56898048) extracted from Lotus japonicus Gifu genome v1.2.
TCACTATCTCCATCATCATTCATCACTAGTCCTCACTTCCCCTTCATCCATTCAAATTATTCACCAAAATGTCTATTGAT TGTTGCAATGGCAAAAAGTGCTTATGGGCTTTTGGGCTAGTGACATGTTTGGTTGCCATGTTAATAGGGGCAGGGGAAGC AAGGGTGCCATTTGCGTGTGACCCCCAAAAAGGGTTAACAAGGGGGTTCAAGTTTTGCAGAACAAACGTGCCAATCCATG TTAGGGTGCAGGACCTCATAGGGAGGCTCACATTGGCGGAGAAGATAAGACTGGTGGTGAACAATGCCATTGAGGTGCCA CGGCTCGGAATTCAAGGCTATGAGTGGTGGTCGGAGGCGTTGCACGGCGTTTCTAATGTGGGGCCAGGGACTAAGTTCGG TGGGGCCTTCCCCGCCGCCACCAGCTTCCCTCAGGTTATCACCACCGCTGCTTCATTCAATCAGTCGCTGTGGAAAGAAA TTGGACGGGTGAGATTAATTAATTCATTAATTATTGTTGTTCTTGCTTTTTCATCCATTGGTTTCATATAGATGATAAAT TATTTAAATAATTGAGAGGTGATTCTTTGGTTCTCCTTTTTGGGCGTTCTTGATGATAGTAATAATAAACTAATCATATA TCTACTCACGATGGATGCATCATATTCATAGCATATTATATGTGTTGCCTTTGGCATCCAGAATGGGTAAATAGCTTTTA TAACAAGAGGCTAAATTCAAGTACATGCACTACTTACCTTTCACTTTCATTCATGTATGTTTCTTTCATATGTTTGAAAT ATCCTAGAATTTTATCATATAAGATAAAGATCAAAACCACATTTCTTAGCTCTCACGACACTCGCGACACTTTATGTTTA ACATAGTTTCTGACACATACAAATTGCATAGTTTGTTAAAAAAAAATTATACGATTCGTAGCGATCAGAAACCGTTATAA GTTGTAAGTGTTACAGGTGCATGTCATCAGAAATAGAAATTTAGTATATATCAATTATAACTATTTTATTATATAAAAAT TATTTTATTTATCTTTTATTCATATATATATTGAACATCTGGAATCATATTATAAATTACGAATGAAAATCAATCTTTCT AGCTATAATAAATTAAATGAAATATATATTTACATGAAACTGTCAATTTTCATTTTAATTAATGAAACTGTTTATATCCA TGAAAATAATTTAATTTCTTGTCCTCAATTTTGATTAGTTTTAATCTTTAAACAATGTATAACCACTGTTTGTGTTTGAC TCACTGATAATATATGAGCTGACAATAAAAAAAATGAAAAGGTGTCTAGACATGGGCCTCAAGTTTTTATTTATAATTAC CAAAACATCTGAATGACGACGAGAATTTGTTTTTGTAAACAATAAATAACAATCAAACTATCAATTATTTGTATTTAATT ATCGTCCAATCATGTGAGCTGAAATTAATGATTCATTTTATTTGTCGCTGAACACTGGCGGAAGCACAGGGGTGACTTCC CTGTGCTTAGTCACCCCTGGCTTCTTGAAATTTCTAAAGAATTTTTTTAAGCAAAGCATTTAAAGGTAACTAGGCAAGAA GCAGAGAGAGTAACAGTGTGTGACAGTGTGAGCACCACTGTTTACACACACAGCACCGGCAGCTCCTCTTTTTATTTTAT TTTTCTTTTAATAATCACATGGAATGGGACCCACACATCCAAAGTTATAATATTTGAAAAACATAACATTAAGATAGTAG TGAAGCCGTGTTTTTCTAATGGAAGGAAACAGAAGCAGGAGAAATGAAAAAACAAGGCAAAGAGAAGAAAACTTATTGCC TTGTTTGGATTTGTTTAATTAAAGAAACAGCACAAAGAAAAAGAACGAGATTTTGCTTAGCTAGTACAATATTTTAGAAC CTCTCAATTTTCTCTCTTACTCTTCACTTTCTCATGTATGACTTTTTATGGATATTCAAATTTTCATGAGTTCAAACTAG AATTTATTGGTTCAATTCTCATTTTTGTTGCTTAATTGGTCTCATTATATGAGATTGAATTTGTGGTGTTTGTGTTTTGT GAAAAAAAAGTGATAAAAATTATGCACATCTACTGTTTGTAAAAAGTCTCCTATAAGATTCAGTGGACTTTTGTGTTGAT AATTTTTTGGTGCGGAAGAGATATTTTGTGGTTCTTCTCTTCAATTATCTACAAGATAGTCTTTTTTGTTCTCACCAGAA TACTTATCAGCCGGTTAGTATCTCTTGCACCCAAACTAATATGATATTTCTTATGCTTATATAAAATATCTCTTGCATTC AAACTAATTTTTTGTTCTCACTAATTTTTTTTTTCGCTTACCCAATTTTGGCAATTTTTATTTGATAAAAATTGAAATTT TCTTACAAAGATCTCAGTCCCCCCTTCTGAAATTCCTGGCTCCGCCCCTGGCTGAACATAAAAATAAAAAAGAGGAGAGA AAAATATGGTTGTTGTACCTGGCTACTTGTCACTTATTTTGTCTGTTAACATAGAAATTAAGTGGCAAAGTGTGTCCCAT GTGCCATGCATGCATTAATTGGAATATATTTATGAATAATGTCAATCAAGTCATTTTATATGTTTAGAAAATGGAAATTG AGGATGGTACGTAGTGTTGAAAATTCATCATAAACATGTTGATTGATTCGTCAGCTACAAGTGGCTAAAACAAAGTCCCT CACGCCATTATTTCATTAACTACGAAAGCAACTCATCTAGATATATGGTGGTTTTGTTTGGTTAATTGTCAATATTGTAG CACTTTCCACTAAGGTTTAATCACTCTCCACGTCATTAATTAATTATGTATGTATTAAGATTGGAATATTAATTAACTAA GCTTTCGGTGGCATCAATACATCCTTTCATTTCTTAAATTGTTATCTTCGGTTAATTAAATATAGGAATTAAGCAATTAT AGGCTATGTTTCCATATCATATATTAATTGTGGTTAGTAAAGCATAAAAACTAATCAACCAAATTTGTATGTTTGATGTT GTTCAGTGAAGTAAAAAAGAGTCTATCATCTTTTCAATCTTTTCTTGATTATTGTTTAGTGAATAATTGAACAAGCACTA GGTGTTTGATGTTGCCCCCACCAAACACCTCTACTTGCAAATGTCCTTCCTCTCACGGCTTCTTTTTTTCTTTTTTTTTT CTTTTTCAGTCCATGCATGCATGTATATACGTTAAATATTGAAAAGGAAAAATCCCTAAATTAAATATTTATTGGAAGAT ATTAATCAATTAGTTAGACTTCGTGAGGTTTGGATCCCAGAAAATGCATGTCAACATTAATGGAGTGTTCTGTTTGTTTC TTAGTGCTAAAAGTTATTCTTTTATTCCGGTTGGTAGTTTAACCAAATGACGTAGCTAGAGGTGAAAGGAAAAAATGACT ATGTTGATGAAAGAGAACAATTCTGAGTTTAATAGGGTATCCGCAATTAAAAATACAATAGAGTCCATTTTGAAATTACA TTTATATATTTACTTGCAGGTGGTGTCTGATGAGGCAAGAGCTATGTACAATGGTGGAGCAGCAGGATTGACGTATTGGA GCCCGAATGTGAACATTTTCCGTGACCCCCGGTGGGGCCGTGGCCAGGAAACTCCCGGTGAGGACCCAACCTTAGCTGCG AAATACGCCGCTAGCTATGTCCAGGGACTCCAAGGTGATGGTGCCGGTAACCGCCTCAAGGTTGCTGCTTGTTGCAAGCA CTACACTGCCTATGACCTTGATAACTGGAATGGTGTGGACAGGTTTCATTTCAATGCCAGGGTATGTATGTATGGGCCAA ATATTTTTATCTCTCATAGCTAGCTATATGGGACCATTTATTTTCTTGATTTAATACAGAAATTATATTTATTTTTATCA AATTTTATTTCATACACCTAATTGATTGAGCTATAATCCGAAGTGGTATAGGCTGTCAGTTGGTAAAATCATTGCTGGAA CTTTTCATGTGGCTTGTTGCTCGGTGACTTAAGCTGCGTGGACATACAAGTCATCTAATGCCTTGTGTGGATTTCTTTCT TGCTTTTGTCATTCTCTTTCCTTTGGATCAAATTAGTAGTTTCCATAAATGCAAGAAGTGATGTAGCAAGTTGTTGATAA AGACTTGTTACCACTTGCAATTGGTTAGGATAAGAGAAAAAGATGCCATCCAAACTACCAATTCGATCAGCTACCACTCA TGCACCATATACTAAATTAAAACCATTTATTTTCCTTTGCCATTATTATTTTTTGTGTCCTATATCGATGTGACCTTGAT GGAAAAGTAGGAATATAATCCATCCAAAAAAATGAAAATGTTTTTCCCTTTGTTTTTTTGCATTTAAGAATATGGATAAA GCAAAGACTCAAAGGCCCATGGGCTGAAACTAAAAATATTTGGGCTTTTGGGTTGTAACAGGTTAGCAAGCAGGACTTGG AGGACACATATAATGTACCATTCAAAGCCTGTGTGATGGAAGGCAAAGTAGCAAGTGTGATGTGCTCTTACAATCAGGTG AATGGAAAGCCTACATGTGCTGATTCTGATCTTCTTCGCAACACAATCCGTGGCCAGTGGCGTCTTAATGGGTAAAGCCC ATTATGATAACTATGCATTTTCCTTCATTATTATTTGTGTTTTTTTTATTTCATTTTTCACTAGCTAACATGGTGGCTTC TTTCTTATCTTATAAAATAGGTACATAGTCTCAGACTGTGACTCTGTTGGAGTATTCTATGACAACCAACACTACACCAG AACACCTGAAGAAGCAGCTGCAGAAGCAATTAAAGCTGGGCTGGATCTTGATTGCGGCCCATTCTTGGCCCTCCACACTG ATGCAGCCATTAAGAATGGGCTCATTACAGAAAATGATCTTAACCTTGCCTTGGCCAACCTTATTACTGTCCAGATGAGA TTGGGCATGTTCGACGGCGAGCCATCGGCCCATCCATACGGGAACTTGGGCCCGAGAGATGTCTGCACCCCGGCCCATAA CGAACTTGCCCTTGAAGCAGCTAGGCAGGGCATAGTTCTGCTAGAAAACAAAGGAAATGCCCTGCCATTATCCCCTACTC GACACCGCACTGTAGGAGTCATTGGACCTAATTCAGATGTTACTGTTACAATGATAGGAAACTATGCTGGTTAGTTATTT AGTAACCCAATTCATCATCATATCATATATATGTGAATATATCATGTTCATAGTTTATTTATATTGTACATTTTGTTTTG TTTTAGGTGTGGCATGTGGTTATACTACACCATTGCAAGGGATTGCTAGATATGTGAAGACCATTCATCAAGCAGGATGC AGGGACGTCAGTTGCCGCGGAACCGAACTATTTGGAAACGCAGAAATTGTGGCTAGGCAGTCTGATGCCACAGTGGTAGT GGTGGGCCTTGACCAGTCCATAGAAGCTGAGTTCAGAGACAGGGTTGGGCTTCTATTACCAGGCCACCAACAAGAGCTCG TGTCTAGAGTGGCCCGGGCCGCAAGAGGCCCGGTTGTGCTGGTCATCATGTCTGGTGGGCCTGTTGATGTCCAATTTGCT AAAGATGATCCTAAGATCAGTGCCATTTTGTGGGTTGGTTACCCTGGCCAAGCTGGAGGAACTGCCATTGCAGATGTGAT TTTTGGTAGAACAAACCCTGGTAAAGTACTCACACACTAGTATTATTAAATCATGAAAAACAGACAGACACTTCAAATGT TGTTACATGTGATCTAATTTATGTTTTTGGTTGGGCTTTTCTTGTAGGAGGAAGGCTACCCAACACATGGTACCCTCAGT CCTATGTGGCTAAACTACCCATGACAAACATGGACATGCGACCAAACCCAGCATCAGGGTACCCAGGAAGGACCTACAGA TTCTACAAGGGCCCAGTGGTGTTCCCATTTGGGCATGGACTGAGCTACAGTAGGTTCACACATACCTTAGCAGTTGCCCC AGAACAGGTTTCAGTCCCCATTGCAAGCCTCCAAGCCTTTAGAAACTCAACCATGTCAAGCAAAGCAGTGAAAGTGAGTC ATGCCAAGTGTGGTGCCTTGAAAATGGGATTCCATGTTGATGTGAAAAATGAAGGCTCCATGGATGGAACTCACACCCTT CTGATTTTCTCAACTCCACCACCTGGAAAATGGTCTGCAAGTAAACAATTGGTGAGCTTCCACAAGACATATGTTCCTGC TGGCTCAAAGCAAAGGGTCAATGTTGGTGTTCATGTGTGCAAGCATCTTTCAGTTGTGGATGAGAATGGGATTCGAAGAA TCCCAATGGGTGATCATGAACTCCATATTGGTGATGTCAAACACACAATTTCAGTCCAAACTCTGGAAGAACAAGATATC AAACATTAA
CDS sequence (LotjaGi6g1v0256100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACATGTTTGGTTGCCATGTTAATAGGGGCAGGGGAAGCAAGGGTGCCATTTGCGTGTGACCCCCAAAAAGGGTTAAC AAGGGGGTTCAAGTTTTGCAGAACAAACGTGCCAATCCATGTTAGGGTGCAGGACCTCATAGGGAGGCTCACATTGGCGG AGAAGATAAGACTGGTGGTGAACAATGCCATTGAGGTGCCACGGCTCGGAATTCAAGGCTATGAGTGGTGGTCGGAGGCG TTGCACGGCGTTTCTAATGTGGGGCCAGGGACTAAGTTCGGTGGGGCCTTCCCCGCCGCCACCAGCTTCCCTCAGGTTAT CACCACCGCTGCTTCATTCAATCAGTCGCTGTGGAAAGAAATTGGACGGGTGGTGTCTGATGAGGCAAGAGCTATGTACA ATGGTGGAGCAGCAGGATTGACGTATTGGAGCCCGAATGTGAACATTTTCCGTGACCCCCGGTGGGGCCGTGGCCAGGAA ACTCCCGGTGAGGACCCAACCTTAGCTGCGAAATACGCCGCTAGCTATGTCCAGGGACTCCAAGGTGATGGTGCCGGTAA CCGCCTCAAGGTTGCTGCTTGTTGCAAGCACTACACTGCCTATGACCTTGATAACTGGAATGGTGTGGACAGGTTTCATT TCAATGCCAGGGTTAGCAAGCAGGACTTGGAGGACACATATAATGTACCATTCAAAGCCTGTGTGATGGAAGGCAAAGTA GCAAGTGTGATGTGCTCTTACAATCAGGTGAATGGAAAGCCTACATGTGCTGATTCTGATCTTCTTCGCAACACAATCCG TGGCCAGTGGCGTCTTAATGGGTACATAGTCTCAGACTGTGACTCTGTTGGAGTATTCTATGACAACCAACACTACACCA GAACACCTGAAGAAGCAGCTGCAGAAGCAATTAAAGCTGGGCTGGATCTTGATTGCGGCCCATTCTTGGCCCTCCACACT GATGCAGCCATTAAGAATGGGCTCATTACAGAAAATGATCTTAACCTTGCCTTGGCCAACCTTATTACTGTCCAGATGAG ATTGGGCATGTTCGACGGCGAGCCATCGGCCCATCCATACGGGAACTTGGGCCCGAGAGATGTCTGCACCCCGGCCCATA ACGAACTTGCCCTTGAAGCAGCTAGGCAGGGCATAGTTCTGCTAGAAAACAAAGGAAATGCCCTGCCATTATCCCCTACT CGACACCGCACTGTAGGAGTCATTGGACCTAATTCAGATGTTACTGTTACAATGATAGGAAACTATGCTGGTGTGGCATG TGGTTATACTACACCATTGCAAGGGATTGCTAGATATGTGAAGACCATTCATCAAGCAGGATGCAGGGACGTCAGTTGCC GCGGAACCGAACTATTTGGAAACGCAGAAATTGTGGCTAGGCAGTCTGATGCCACAGTGGTAGTGGTGGGCCTTGACCAG TCCATAGAAGCTGAGTTCAGAGACAGGGTTGGGCTTCTATTACCAGGCCACCAACAAGAGCTCGTGTCTAGAGTGGCCCG GGCCGCAAGAGGCCCGGTTGTGCTGGTCATCATGTCTGGTGGGCCTGTTGATGTCCAATTTGCTAAAGATGATCCTAAGA TCAGTGCCATTTTGTGGGTTGGTTACCCTGGCCAAGCTGGAGGAACTGCCATTGCAGATGTGATTTTTGGTAGAACAAAC CCTGGAGGAAGGCTACCCAACACATGGTACCCTCAGTCCTATGTGGCTAAACTACCCATGACAAACATGGACATGCGACC AAACCCAGCATCAGGGTACCCAGGAAGGACCTACAGATTCTACAAGGGCCCAGTGGTGTTCCCATTTGGGCATGGACTGA GCTACAGTAGGTTCACACATACCTTAGCAGTTGCCCCAGAACAGGTTTCAGTCCCCATTGCAAGCCTCCAAGCCTTTAGA AACTCAACCATGTCAAGCAAAGCAGTGAAAGTGAGTCATGCCAAGTGTGGTGCCTTGAAAATGGGATTCCATGTTGATGT GAAAAATGAAGGCTCCATGGATGGAACTCACACCCTTCTGATTTTCTCAACTCCACCACCTGGAAAATGGTCTGCAAGTA AACAATTGGTGAGCTTCCACAAGACATATGTTCCTGCTGGCTCAAAGCAAAGGGTCAATGTTGGTGTTCATGTGTGCAAG CATCTTTCAGTTGTGGATGAGAATGGGATTCGAAGAATCCCAATGGGTGATCATGAACTCCATATTGGTGATGTCAAACA CACAATTTCAGTCCAAACTCTGGAAGAACAAGATATCAAACATTAA
Protein sequence (LotjaGi6g1v0256100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTCLVAMLIGAGEARVPFACDPQKGLTRGFKFCRTNVPIHVRVQDLIGRLTLAEKIRLVVNNAIEVPRLGIQGYEWWSEA LHGVSNVGPGTKFGGAFPAATSFPQVITTAASFNQSLWKEIGRVVSDEARAMYNGGAAGLTYWSPNVNIFRDPRWGRGQE TPGEDPTLAAKYAASYVQGLQGDGAGNRLKVAACCKHYTAYDLDNWNGVDRFHFNARVSKQDLEDTYNVPFKACVMEGKV ASVMCSYNQVNGKPTCADSDLLRNTIRGQWRLNGYIVSDCDSVGVFYDNQHYTRTPEEAAAEAIKAGLDLDCGPFLALHT DAAIKNGLITENDLNLALANLITVQMRLGMFDGEPSAHPYGNLGPRDVCTPAHNELALEAARQGIVLLENKGNALPLSPT RHRTVGVIGPNSDVTVTMIGNYAGVACGYTTPLQGIARYVKTIHQAGCRDVSCRGTELFGNAEIVARQSDATVVVVGLDQ SIEAEFRDRVGLLLPGHQQELVSRVARAARGPVVLVIMSGGPVDVQFAKDDPKISAILWVGYPGQAGGTAIADVIFGRTN PGGRLPNTWYPQSYVAKLPMTNMDMRPNPASGYPGRTYRFYKGPVVFPFGHGLSYSRFTHTLAVAPEQVSVPIASLQAFR NSTMSSKAVKVSHAKCGALKMGFHVDVKNEGSMDGTHTLLIFSTPPPGKWSASKQLVSFHKTYVPAGSKQRVNVGVHVCK HLSVVDENGIRRIPMGDHELHIGDVKHTISVQTLEEQDIKH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 14 | 14 | - | – | |
Phobius | 1 | 1 | 1 | - | – | |
Phobius | 2 | 9 | 8 | - | – | |
PANTHER | 9 | 755 | 747 | 0.0 | – | |
PANTHER | 9 | 755 | 747 | 0.0 | – | |
Phobius | 10 | 14 | 5 | - | – | |
Phobius | 15 | 761 | 747 | - | – | |
SUPERFAMILY | 31 | 384 | 354 | 4.53E-90 | ||
Gene3D | 40 | 360 | 321 | 2.4E-88 | ||
Pfam | 98 | 343 | 246 | 3.6E-39 | ||
PRINTS | 103 | 122 | 20 | 3.3E-6 | ||
PRINTS | 191 | 207 | 17 | 3.3E-6 | ||
PRINTS | 265 | 283 | 19 | 3.3E-6 | ||
Gene3D | 370 | 616 | 247 | 1.5E-63 | ||
Pfam | 385 | 615 | 231 | 2.7E-52 | ||
SUPERFAMILY | 385 | 618 | 234 | 1.83E-50 | ||
Gene3D | 629 | 756 | 128 | 6.3E-10 | ||
SMART | 677 | 746 | 70 | 1.2E-8 | ||
Pfam | 681 | 744 | 64 | 4.3E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi6g1v0256100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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