Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0256100 |
| Transcript ID | LotjaGi6g1v0256100.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta xylosidase; TAIR: AT5G49360.1 beta-xylosidase 1; Swiss-Prot: sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1; TrEMBL-Plants: tr|A0A1J7FUN8|A0A1J7FUN8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0256100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:56891640..56898048) extracted from Lotus japonicus Gifu genome v1.2.
TCACTATCTCCATCATCATTCATCACTAGTCCTCACTTCCCCTTCATCCATTCAAATTATTCACCAAAATGTCTATTGAT TGTTGCAATGGCAAAAAGTGCTTATGGGCTTTTGGGCTAGTGACATGTTTGGTTGCCATGTTAATAGGGGCAGGGGAAGC AAGGGTGCCATTTGCGTGTGACCCCCAAAAAGGGTTAACAAGGGGGTTCAAGTTTTGCAGAACAAACGTGCCAATCCATG TTAGGGTGCAGGACCTCATAGGGAGGCTCACATTGGCGGAGAAGATAAGACTGGTGGTGAACAATGCCATTGAGGTGCCA CGGCTCGGAATTCAAGGCTATGAGTGGTGGTCGGAGGCGTTGCACGGCGTTTCTAATGTGGGGCCAGGGACTAAGTTCGG TGGGGCCTTCCCCGCCGCCACCAGCTTCCCTCAGGTTATCACCACCGCTGCTTCATTCAATCAGTCGCTGTGGAAAGAAA TTGGACGGGTGAGATTAATTAATTCATTAATTATTGTTGTTCTTGCTTTTTCATCCATTGGTTTCATATAGATGATAAAT TATTTAAATAATTGAGAGGTGATTCTTTGGTTCTCCTTTTTGGGCGTTCTTGATGATAGTAATAATAAACTAATCATATA TCTACTCACGATGGATGCATCATATTCATAGCATATTATATGTGTTGCCTTTGGCATCCAGAATGGGTAAATAGCTTTTA TAACAAGAGGCTAAATTCAAGTACATGCACTACTTACCTTTCACTTTCATTCATGTATGTTTCTTTCATATGTTTGAAAT ATCCTAGAATTTTATCATATAAGATAAAGATCAAAACCACATTTCTTAGCTCTCACGACACTCGCGACACTTTATGTTTA ACATAGTTTCTGACACATACAAATTGCATAGTTTGTTAAAAAAAAATTATACGATTCGTAGCGATCAGAAACCGTTATAA GTTGTAAGTGTTACAGGTGCATGTCATCAGAAATAGAAATTTAGTATATATCAATTATAACTATTTTATTATATAAAAAT TATTTTATTTATCTTTTATTCATATATATATTGAACATCTGGAATCATATTATAAATTACGAATGAAAATCAATCTTTCT AGCTATAATAAATTAAATGAAATATATATTTACATGAAACTGTCAATTTTCATTTTAATTAATGAAACTGTTTATATCCA TGAAAATAATTTAATTTCTTGTCCTCAATTTTGATTAGTTTTAATCTTTAAACAATGTATAACCACTGTTTGTGTTTGAC TCACTGATAATATATGAGCTGACAATAAAAAAAATGAAAAGGTGTCTAGACATGGGCCTCAAGTTTTTATTTATAATTAC CAAAACATCTGAATGACGACGAGAATTTGTTTTTGTAAACAATAAATAACAATCAAACTATCAATTATTTGTATTTAATT ATCGTCCAATCATGTGAGCTGAAATTAATGATTCATTTTATTTGTCGCTGAACACTGGCGGAAGCACAGGGGTGACTTCC CTGTGCTTAGTCACCCCTGGCTTCTTGAAATTTCTAAAGAATTTTTTTAAGCAAAGCATTTAAAGGTAACTAGGCAAGAA GCAGAGAGAGTAACAGTGTGTGACAGTGTGAGCACCACTGTTTACACACACAGCACCGGCAGCTCCTCTTTTTATTTTAT TTTTCTTTTAATAATCACATGGAATGGGACCCACACATCCAAAGTTATAATATTTGAAAAACATAACATTAAGATAGTAG TGAAGCCGTGTTTTTCTAATGGAAGGAAACAGAAGCAGGAGAAATGAAAAAACAAGGCAAAGAGAAGAAAACTTATTGCC TTGTTTGGATTTGTTTAATTAAAGAAACAGCACAAAGAAAAAGAACGAGATTTTGCTTAGCTAGTACAATATTTTAGAAC CTCTCAATTTTCTCTCTTACTCTTCACTTTCTCATGTATGACTTTTTATGGATATTCAAATTTTCATGAGTTCAAACTAG AATTTATTGGTTCAATTCTCATTTTTGTTGCTTAATTGGTCTCATTATATGAGATTGAATTTGTGGTGTTTGTGTTTTGT GAAAAAAAAGTGATAAAAATTATGCACATCTACTGTTTGTAAAAAGTCTCCTATAAGATTCAGTGGACTTTTGTGTTGAT AATTTTTTGGTGCGGAAGAGATATTTTGTGGTTCTTCTCTTCAATTATCTACAAGATAGTCTTTTTTGTTCTCACCAGAA TACTTATCAGCCGGTTAGTATCTCTTGCACCCAAACTAATATGATATTTCTTATGCTTATATAAAATATCTCTTGCATTC AAACTAATTTTTTGTTCTCACTAATTTTTTTTTTCGCTTACCCAATTTTGGCAATTTTTATTTGATAAAAATTGAAATTT TCTTACAAAGATCTCAGTCCCCCCTTCTGAAATTCCTGGCTCCGCCCCTGGCTGAACATAAAAATAAAAAAGAGGAGAGA AAAATATGGTTGTTGTACCTGGCTACTTGTCACTTATTTTGTCTGTTAACATAGAAATTAAGTGGCAAAGTGTGTCCCAT GTGCCATGCATGCATTAATTGGAATATATTTATGAATAATGTCAATCAAGTCATTTTATATGTTTAGAAAATGGAAATTG AGGATGGTACGTAGTGTTGAAAATTCATCATAAACATGTTGATTGATTCGTCAGCTACAAGTGGCTAAAACAAAGTCCCT CACGCCATTATTTCATTAACTACGAAAGCAACTCATCTAGATATATGGTGGTTTTGTTTGGTTAATTGTCAATATTGTAG CACTTTCCACTAAGGTTTAATCACTCTCCACGTCATTAATTAATTATGTATGTATTAAGATTGGAATATTAATTAACTAA GCTTTCGGTGGCATCAATACATCCTTTCATTTCTTAAATTGTTATCTTCGGTTAATTAAATATAGGAATTAAGCAATTAT AGGCTATGTTTCCATATCATATATTAATTGTGGTTAGTAAAGCATAAAAACTAATCAACCAAATTTGTATGTTTGATGTT GTTCAGTGAAGTAAAAAAGAGTCTATCATCTTTTCAATCTTTTCTTGATTATTGTTTAGTGAATAATTGAACAAGCACTA GGTGTTTGATGTTGCCCCCACCAAACACCTCTACTTGCAAATGTCCTTCCTCTCACGGCTTCTTTTTTTCTTTTTTTTTT CTTTTTCAGTCCATGCATGCATGTATATACGTTAAATATTGAAAAGGAAAAATCCCTAAATTAAATATTTATTGGAAGAT ATTAATCAATTAGTTAGACTTCGTGAGGTTTGGATCCCAGAAAATGCATGTCAACATTAATGGAGTGTTCTGTTTGTTTC TTAGTGCTAAAAGTTATTCTTTTATTCCGGTTGGTAGTTTAACCAAATGACGTAGCTAGAGGTGAAAGGAAAAAATGACT ATGTTGATGAAAGAGAACAATTCTGAGTTTAATAGGGTATCCGCAATTAAAAATACAATAGAGTCCATTTTGAAATTACA TTTATATATTTACTTGCAGGTGGTGTCTGATGAGGCAAGAGCTATGTACAATGGTGGAGCAGCAGGATTGACGTATTGGA GCCCGAATGTGAACATTTTCCGTGACCCCCGGTGGGGCCGTGGCCAGGAAACTCCCGGTGAGGACCCAACCTTAGCTGCG AAATACGCCGCTAGCTATGTCCAGGGACTCCAAGGTGATGGTGCCGGTAACCGCCTCAAGGTTGCTGCTTGTTGCAAGCA CTACACTGCCTATGACCTTGATAACTGGAATGGTGTGGACAGGTTTCATTTCAATGCCAGGGTATGTATGTATGGGCCAA ATATTTTTATCTCTCATAGCTAGCTATATGGGACCATTTATTTTCTTGATTTAATACAGAAATTATATTTATTTTTATCA AATTTTATTTCATACACCTAATTGATTGAGCTATAATCCGAAGTGGTATAGGCTGTCAGTTGGTAAAATCATTGCTGGAA CTTTTCATGTGGCTTGTTGCTCGGTGACTTAAGCTGCGTGGACATACAAGTCATCTAATGCCTTGTGTGGATTTCTTTCT TGCTTTTGTCATTCTCTTTCCTTTGGATCAAATTAGTAGTTTCCATAAATGCAAGAAGTGATGTAGCAAGTTGTTGATAA AGACTTGTTACCACTTGCAATTGGTTAGGATAAGAGAAAAAGATGCCATCCAAACTACCAATTCGATCAGCTACCACTCA TGCACCATATACTAAATTAAAACCATTTATTTTCCTTTGCCATTATTATTTTTTGTGTCCTATATCGATGTGACCTTGAT GGAAAAGTAGGAATATAATCCATCCAAAAAAATGAAAATGTTTTTCCCTTTGTTTTTTTGCATTTAAGAATATGGATAAA GCAAAGACTCAAAGGCCCATGGGCTGAAACTAAAAATATTTGGGCTTTTGGGTTGTAACAGGTTAGCAAGCAGGACTTGG AGGACACATATAATGTACCATTCAAAGCCTGTGTGATGGAAGGCAAAGTAGCAAGTGTGATGTGCTCTTACAATCAGGTG AATGGAAAGCCTACATGTGCTGATTCTGATCTTCTTCGCAACACAATCCGTGGCCAGTGGCGTCTTAATGGGTAAAGCCC ATTATGATAACTATGCATTTTCCTTCATTATTATTTGTGTTTTTTTTATTTCATTTTTCACTAGCTAACATGGTGGCTTC TTTCTTATCTTATAAAATAGGTACATAGTCTCAGACTGTGACTCTGTTGGAGTATTCTATGACAACCAACACTACACCAG AACACCTGAAGAAGCAGCTGCAGAAGCAATTAAAGCTGGGCTGGATCTTGATTGCGGCCCATTCTTGGCCCTCCACACTG ATGCAGCCATTAAGAATGGGCTCATTACAGAAAATGATCTTAACCTTGCCTTGGCCAACCTTATTACTGTCCAGATGAGA TTGGGCATGTTCGACGGCGAGCCATCGGCCCATCCATACGGGAACTTGGGCCCGAGAGATGTCTGCACCCCGGCCCATAA CGAACTTGCCCTTGAAGCAGCTAGGCAGGGCATAGTTCTGCTAGAAAACAAAGGAAATGCCCTGCCATTATCCCCTACTC GACACCGCACTGTAGGAGTCATTGGACCTAATTCAGATGTTACTGTTACAATGATAGGAAACTATGCTGGTTAGTTATTT AGTAACCCAATTCATCATCATATCATATATATGTGAATATATCATGTTCATAGTTTATTTATATTGTACATTTTGTTTTG TTTTAGGTGTGGCATGTGGTTATACTACACCATTGCAAGGGATTGCTAGATATGTGAAGACCATTCATCAAGCAGGATGC AGGGACGTCAGTTGCCGCGGAACCGAACTATTTGGAAACGCAGAAATTGTGGCTAGGCAGTCTGATGCCACAGTGGTAGT GGTGGGCCTTGACCAGTCCATAGAAGCTGAGTTCAGAGACAGGGTTGGGCTTCTATTACCAGGCCACCAACAAGAGCTCG TGTCTAGAGTGGCCCGGGCCGCAAGAGGCCCGGTTGTGCTGGTCATCATGTCTGGTGGGCCTGTTGATGTCCAATTTGCT AAAGATGATCCTAAGATCAGTGCCATTTTGTGGGTTGGTTACCCTGGCCAAGCTGGAGGAACTGCCATTGCAGATGTGAT TTTTGGTAGAACAAACCCTGGTAAAGTACTCACACACTAGTATTATTAAATCATGAAAAACAGACAGACACTTCAAATGT TGTTACATGTGATCTAATTTATGTTTTTGGTTGGGCTTTTCTTGTAGGAGGAAGGCTACCCAACACATGGTACCCTCAGT CCTATGTGGCTAAACTACCCATGACAAACATGGACATGCGACCAAACCCAGCATCAGGGTACCCAGGAAGGACCTACAGA TTCTACAAGGGCCCAGTGGTGTTCCCATTTGGGCATGGACTGAGCTACAGTAGGTTCACACATACCTTAGCAGTTGCCCC AGAACAGGTTTCAGTCCCCATTGCAAGCCTCCAAGCCTTTAGAAACTCAACCATGTCAAGCAAAGCAGTGAAAGTGAGTC ATGCCAAGTGTGGTGCCTTGAAAATGGGATTCCATGTTGATGTGAAAAATGAAGGCTCCATGGATGGAACTCACACCCTT CTGATTTTCTCAACTCCACCACCTGGAAAATGGTCTGCAAGTAAACAATTGGTGAGCTTCCACAAGACATATGTTCCTGC TGGCTCAAAGCAAAGGGTCAATGTTGGTGTTCATGTGTGCAAGCATCTTTCAGTTGTGGATGAGAATGGGATTCGAAGAA TCCCAATGGGTGATCATGAACTCCATATTGGTGATGTCAAACACACAATTTCAGTCCAAACTCTGGAAGAACAAGATATC AAACATTAA
CDS sequence (LotjaGi6g1v0256100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACATGTTTGGTTGCCATGTTAATAGGGGCAGGGGAAGCAAGGGTGCCATTTGCGTGTGACCCCCAAAAAGGGTTAAC AAGGGGGTTCAAGTTTTGCAGAACAAACGTGCCAATCCATGTTAGGGTGCAGGACCTCATAGGGAGGCTCACATTGGCGG AGAAGATAAGACTGGTGGTGAACAATGCCATTGAGGTGCCACGGCTCGGAATTCAAGGCTATGAGTGGTGGTCGGAGGCG TTGCACGGCGTTTCTAATGTGGGGCCAGGGACTAAGTTCGGTGGGGCCTTCCCCGCCGCCACCAGCTTCCCTCAGGTTAT CACCACCGCTGCTTCATTCAATCAGTCGCTGTGGAAAGAAATTGGACGGGTGGTGTCTGATGAGGCAAGAGCTATGTACA ATGGTGGAGCAGCAGGATTGACGTATTGGAGCCCGAATGTGAACATTTTCCGTGACCCCCGGTGGGGCCGTGGCCAGGAA ACTCCCGGTGAGGACCCAACCTTAGCTGCGAAATACGCCGCTAGCTATGTCCAGGGACTCCAAGGTGATGGTGCCGGTAA CCGCCTCAAGGTTGCTGCTTGTTGCAAGCACTACACTGCCTATGACCTTGATAACTGGAATGGTGTGGACAGGTTTCATT TCAATGCCAGGGTTAGCAAGCAGGACTTGGAGGACACATATAATGTACCATTCAAAGCCTGTGTGATGGAAGGCAAAGTA GCAAGTGTGATGTGCTCTTACAATCAGGTGAATGGAAAGCCTACATGTGCTGATTCTGATCTTCTTCGCAACACAATCCG TGGCCAGTGGCGTCTTAATGGGTACATAGTCTCAGACTGTGACTCTGTTGGAGTATTCTATGACAACCAACACTACACCA GAACACCTGAAGAAGCAGCTGCAGAAGCAATTAAAGCTGGGCTGGATCTTGATTGCGGCCCATTCTTGGCCCTCCACACT GATGCAGCCATTAAGAATGGGCTCATTACAGAAAATGATCTTAACCTTGCCTTGGCCAACCTTATTACTGTCCAGATGAG ATTGGGCATGTTCGACGGCGAGCCATCGGCCCATCCATACGGGAACTTGGGCCCGAGAGATGTCTGCACCCCGGCCCATA ACGAACTTGCCCTTGAAGCAGCTAGGCAGGGCATAGTTCTGCTAGAAAACAAAGGAAATGCCCTGCCATTATCCCCTACT CGACACCGCACTGTAGGAGTCATTGGACCTAATTCAGATGTTACTGTTACAATGATAGGAAACTATGCTGGTGTGGCATG TGGTTATACTACACCATTGCAAGGGATTGCTAGATATGTGAAGACCATTCATCAAGCAGGATGCAGGGACGTCAGTTGCC GCGGAACCGAACTATTTGGAAACGCAGAAATTGTGGCTAGGCAGTCTGATGCCACAGTGGTAGTGGTGGGCCTTGACCAG TCCATAGAAGCTGAGTTCAGAGACAGGGTTGGGCTTCTATTACCAGGCCACCAACAAGAGCTCGTGTCTAGAGTGGCCCG GGCCGCAAGAGGCCCGGTTGTGCTGGTCATCATGTCTGGTGGGCCTGTTGATGTCCAATTTGCTAAAGATGATCCTAAGA TCAGTGCCATTTTGTGGGTTGGTTACCCTGGCCAAGCTGGAGGAACTGCCATTGCAGATGTGATTTTTGGTAGAACAAAC CCTGGAGGAAGGCTACCCAACACATGGTACCCTCAGTCCTATGTGGCTAAACTACCCATGACAAACATGGACATGCGACC AAACCCAGCATCAGGGTACCCAGGAAGGACCTACAGATTCTACAAGGGCCCAGTGGTGTTCCCATTTGGGCATGGACTGA GCTACAGTAGGTTCACACATACCTTAGCAGTTGCCCCAGAACAGGTTTCAGTCCCCATTGCAAGCCTCCAAGCCTTTAGA AACTCAACCATGTCAAGCAAAGCAGTGAAAGTGAGTCATGCCAAGTGTGGTGCCTTGAAAATGGGATTCCATGTTGATGT GAAAAATGAAGGCTCCATGGATGGAACTCACACCCTTCTGATTTTCTCAACTCCACCACCTGGAAAATGGTCTGCAAGTA AACAATTGGTGAGCTTCCACAAGACATATGTTCCTGCTGGCTCAAAGCAAAGGGTCAATGTTGGTGTTCATGTGTGCAAG CATCTTTCAGTTGTGGATGAGAATGGGATTCGAAGAATCCCAATGGGTGATCATGAACTCCATATTGGTGATGTCAAACA CACAATTTCAGTCCAAACTCTGGAAGAACAAGATATCAAACATTAA
Protein sequence (LotjaGi6g1v0256100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTCLVAMLIGAGEARVPFACDPQKGLTRGFKFCRTNVPIHVRVQDLIGRLTLAEKIRLVVNNAIEVPRLGIQGYEWWSEA LHGVSNVGPGTKFGGAFPAATSFPQVITTAASFNQSLWKEIGRVVSDEARAMYNGGAAGLTYWSPNVNIFRDPRWGRGQE TPGEDPTLAAKYAASYVQGLQGDGAGNRLKVAACCKHYTAYDLDNWNGVDRFHFNARVSKQDLEDTYNVPFKACVMEGKV ASVMCSYNQVNGKPTCADSDLLRNTIRGQWRLNGYIVSDCDSVGVFYDNQHYTRTPEEAAAEAIKAGLDLDCGPFLALHT DAAIKNGLITENDLNLALANLITVQMRLGMFDGEPSAHPYGNLGPRDVCTPAHNELALEAARQGIVLLENKGNALPLSPT RHRTVGVIGPNSDVTVTMIGNYAGVACGYTTPLQGIARYVKTIHQAGCRDVSCRGTELFGNAEIVARQSDATVVVVGLDQ SIEAEFRDRVGLLLPGHQQELVSRVARAARGPVVLVIMSGGPVDVQFAKDDPKISAILWVGYPGQAGGTAIADVIFGRTN PGGRLPNTWYPQSYVAKLPMTNMDMRPNPASGYPGRTYRFYKGPVVFPFGHGLSYSRFTHTLAVAPEQVSVPIASLQAFR NSTMSSKAVKVSHAKCGALKMGFHVDVKNEGSMDGTHTLLIFSTPPPGKWSASKQLVSFHKTYVPAGSKQRVNVGVHVCK HLSVVDENGIRRIPMGDHELHIGDVKHTISVQTLEEQDIKH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 14 | 14 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 2 | 9 | 8 | - | – | |
| PANTHER | 9 | 755 | 747 | 0.0 | – | |
| PANTHER | 9 | 755 | 747 | 0.0 | – | |
| Phobius | 10 | 14 | 5 | - | – | |
| Phobius | 15 | 761 | 747 | - | – | |
| SUPERFAMILY | 31 | 384 | 354 | 4.53E-90 | ||
| Gene3D | 40 | 360 | 321 | 2.4E-88 | ||
| Pfam | 98 | 343 | 246 | 3.6E-39 | ||
| PRINTS | 103 | 122 | 20 | 3.3E-6 | ||
| PRINTS | 191 | 207 | 17 | 3.3E-6 | ||
| PRINTS | 265 | 283 | 19 | 3.3E-6 | ||
| Gene3D | 370 | 616 | 247 | 1.5E-63 | ||
| Pfam | 385 | 615 | 231 | 2.7E-52 | ||
| SUPERFAMILY | 385 | 618 | 234 | 1.83E-50 | ||
| Gene3D | 629 | 756 | 128 | 6.3E-10 | ||
| SMART | 677 | 746 | 70 | 1.2E-8 | ||
| Pfam | 681 | 744 | 64 | 4.3E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi6g1v0256100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…