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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0351000 |
| Transcript ID | LotjaGi6g1v0351000.1 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA helicase; TAIR: AT2G14050.1 minichromosome maintenance 9; Swiss-Prot: sp|F4IFF3|MCM9_ARATH Probable DNA helicase MCM9; TrEMBL-Plants: tr|K7M9S9|K7M9S9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0351000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:66296770..66304347) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGAAGAACACCGAGGATCCAGGTCACTGGAAGAAGCCAATGGCCAGCTACCTCGTCCGCCACCATCCCGATCAGCT CAACTCCATTGCTTCTTCTCCCGATCCCAACATTCATTACCCTCTTCACATCGATTTCGCTGAGTTGATGGAAGATGATC ATCGCATTGCCCATCTCCTCTTTGCCCAACCCAACACCTACCTGCAAATCTTCGATGACGCTGCTCTCTGGGCTCATGTA TTGTATTCCTAAATTCTCTCATTTATTATTTTATTTTATTTTAATTTGGATGTGACAGAAAAATTTGAAACTTTACTTGA TTTTGTGATGTGGGTCGTGTAGAAAATTGTATTGGGAGATATGGAGGAAGGGGTTGAGAAAAAATTCATTCATGTTCGCG TTAACGTCTGCGGCTCTCCCCTTGAATGCCCTGGTTTGCTTCTGCCCGCTACTTGTTTGTCGAAATTCCCCTTAAAGGAG GACCCTTCACTGACCTCAATTGTTGTTGTGGATGACTTGTGTTATGTGTATTAGAGACTTTTCCGAGCATAGGACGTGTT CGAGTGCAGCACCGTGGAATCCTTCTCACTCTCAAAGGGATAGTGATCAGGTCCGGAGCGATCAAGATGCATGAAGGAGA GAGGAAATACATGTGTCAAAAATGCCAAAGCAGGTGCAGCATATTCCTCTTGTTCTTGTTGGAGAAAATTGTCACATGTA CCTCATGATACGTCTGTTGATTATCAATTAACAAAGCATGTGTGCAGCTTCCCAGTTTATCCTGAGGTGGAAGCTCGAAA CGCCATATCATTACCCTCATTTTGCCCAATTCAGGTATCACCTGCAGGCTGCATCTGAGTTTTAAGTCCTGTATTTCCCC TACCGTCTCCTTGGACATGTCCCTATTGCATTACCCAGAATTAGATAAAGAGAATCATGATATGTACTATGTAGTGTTGA TTTTTGAAGTCATATATTAAAATGTAATAGAAAAGTGCCACGTTTAGAATTTGCTACCACTATGTGAAGCTTAAACTTTC GTTTTTTAATTTTTAGCCTTCAAATATCTAGGTGCTCATTTTTCTGTAACACTGATATTACTATACTAGTATACTTTTAA ATTGGCTGAAATCCTCATTCATATGGTTTTGTTAGTTACTTGTTGTTCTTTGTGGCAGAGGTCTAAGCCCTGTGGAGGTG TAAAATTCCAGTATGTAGAGAATACTATAGTATGTCATGATTATCAGGAGATAAAAATCCAAGAAAGTACACAGGTGCTA GGTGTTGGGGCAATTCCTCGTTCAATTCTTGTCATCTTGAAGGATGACCTTGTTGATGTTGTTAAAGCTGGAGGTAATTA GATTTTTCATCTTCTTCTTGCCAAATATATGATAGATACACGGTATTGAAAATTATGTTATGATATACACATGGTATTTT AATATCTGGCCTGAGCTAGATTCTAGTTAATACTTGTTGGCCTACTTTCAGTCTTCCAGTATTGGATCTAAGAAATCTAA TTCATATATTAGGAATTTTCCTTTCTTAAGCTTATGAATGGTGTATCCTGGATTTTTTATAAGTTATAATGAATCTGGCA TAGCTTCTCTCTCTCCATGTTGGTCTTATTGTTTTTCTTTCAAACTATTACTGGCCGTTAGTTGTTACTATGTGGGGAAC TTTTTTTTTTCTTATGTGTTTGCGACTTTCTGATAAGTTATGGCTTGCATTTGATTTTGGGCTTGGCGTGACATATGATC TCACTGACATATTTGATTTCTTGTTTCTTTTCACCCTTGCAAGATTTTTACCTTTTGCTTCCTGGCCCTTGTAAGCAGTG TGTTGACTAGGGCAGTAAGGCTTAAAGGAGCATGATTAATTCATAAACGCAATATTTGTTGTTGGAAGTTCGTTGTGAAG GATTACTTGTTTTTCGCTTGCAGATGATGTGATTGTCACTGGTCTCTTAACAGCAAAGTGGTCTCCAGAGTTGAAGGATG TGCGCTGTGACCTTGATCCTGTTTTGATAGCCAACAGCATAAGGTGAAAAAGTAGTTCTCACTGTGTTTGCCCTTTAAAA ATTTGTAAGAAAGTAAAACTTCCTAGTATTTGACATTTGCTGTTTTGGTGCGCTTCATGGAAAAGTTTCACAAGTGATAA ATATATTTATTCGTGCGTGAAAGGGAGCAAGTTTTACATATTACATGATAAACATTCTTAAATGAAGAACAGATGCAGTG ATTTCTGGATTTGAACTTATTATTCTTTAAATTGTAGTCATTTACTTTTGATGGAAGGAAAGCAAAAAAATATGATAAGT TTGTTCTGTATATTTTCTCATTGTTATCAGGAGAATCAATGAACTGAAGTCAGAAATTGATATTTCCGATGATCTTGTTA CGAAATTCAAGCAGTTTTGGGATCACTTCAAAGATGCGCCTTTAAAAGGTGCTTTCCCATAACACATCTTTGGTATCCCT TGTATCATTCAAATTTATAGTTCTGAACCATTAGTAAATGTTTCTCCCAATATTTATTATCTTATGCTTTCCTTAAGAAA CCGCATAGCGCAATTCCTAAAATGTTTGGTCCAACTTTGCCCGTACGCTTACACCAACTTTTAATGAATGTAAAAGTTTT ATGTGGAAGGTTATGATTTATGAATTATGTGATATGAAATGAAAACTTAAAAGCCATTTCAAACTGATCCAGGGAGGAAT GCCATTCTACGAGCAGTTTGCCCACAAGTATTTGGTCTTTTCACAGTCAAGCTGGCTGGTAAACATTTTCACCGAATGGC TATTTACTTATTCACCTTGAAATTCATTACACTTTAACATATGTTTGCTACTTGCATTTTAGAAGCTGTGTTCGCATGCT TACAGCTCTAAAGGATTTGTTTTGACATATTTTCTACTGTTATATTGATGAACATATGGAATCTTTGCCTGGTGTGTGCT GAGAAAAGAAGTCTGATGTGAAGATCTTCGTTTTATTTTGATTAAAATTCATGTCAATAATGTGAACTAGTATTAAGAAC TATGGCTCTTATAGTTTTGTAATACAACTGAAATTTCTATTTTCTGAATCATTATCATATCACTTTGCAAGTATTTCATG TCTTCTGTTTCTCCACTCAGTTGCATTAACACTTATTGGAGGTGTGCAACATGTCGATGCTTCTGGAACAAGGGTAAGAG GGGAGTCCCACTTACTCTTGGTTGGTGATCCTGGTAAGCAATCCCCTGCTATTACTATTTCTACTGTCACCCTCACTATG ACTATTGCTACTATTACTTGAAGTTTGTAACCTTGATTATCATTTAATACTTGATAATATTACAATCCGTCCTACCAACC CTGAAAGTGACATGAAATATACAGAAAAAAGAGGCAGCCTCTATCTGATGATGATATGACAAAAATATTATGGTGTAGCC TTGTATGCTTACTAATTGCTTTCGTTTTTGGTGCTTCAGTTATGCACAACTACGTGTTTAGTAATTTTATGTTATCAAAT TTCTGTATACTAGTAAACTGCTGTTAAAAAATGGATAATGCTTTGCCTTGTGACTTGAGTATGTGTTTCTTATCAATCAA CTGCAGTTTTCTTAACTATATATATTGAGTGGTATGTTGCCTTTACTGTCAGTTCTTATCATCAAATGAAAGAAAAAACA AAAGTAGAAAAAGTTTAGTCCTAAATTTCTCTTATTTGTCAGTTGACTCGTTATATGTTTTTTGTAGGAACTGGGAAATC TCAGTTTCTGAAATTTGCTGCAAAATTAAGCAACCGATCTGTTATTACCACTGGGTTGGGAAGCACAAGTGCAGGATTGA CTGTTACTGCTGTGAGGGATGGAGGTAGGTTTAATTCAGTCACAGCAACAGATCATCATTCATGCCTTAGTAGAAGTGTT TCTATCTATTTGTATCAAATATTTGCATATTACTCAAAGTCTTCGTTTCTGTTAAATTTTCCTCTTGCTATTAAAAGTTT GTCAAAATGATCTTTAGTGAAATGTTTAGATTTCCCTTATTTGATGAAATTATGTTCAAATTGCATGTGCAGCCCTAAAT TCTGTTGAATGCTTTTTTTAACGCGAATATGAAGAAATTGCTACTCTTTTTCATTCAGTTTACGTGAACATGCCTCTCAT GTTGTTTTAAGATTACAAAATAAGGACGGAATTGATTGTTAAAGTTGCAAACTTAAAATCTAGCATTTCAAGTGGACTTC AACTTAATCAGACATAATTTTAATTTTTTAAGCAAGTACAAATTTCAACATGCATAGAATCATAGATCTGCATACCTTTA GTCAGTTATACTAAGTGCACGGCCAATTTGTGGAATCTGTAGGCGAGTGGATGTTGGAAGCTGGAGCCCTTGTCTTGGCA GATGGAGGCTTGTGTTGCATAGATGAGTTTGACAGGTAAGCTCGAGTGTGATGCTTTGATTTTGAATTTTTTCTGTAGGT TTGGTCTTTGACCAAATGTTGTGTGTGGCCAAGTATTACCTCGGTTGTGGAGCTGCAAATCAAAACAAATAAAAAAAGAT ATTCATAGTTGGAGGTTTAGGTTAGAAAATGCAGAAAGTGTTAGTAAGAGCTACAAATCATTTTCTTTTGGCTTTTATTT TATTTTATTTAATGATAGGATGTTTGTTTCTCCGCAAAAATATGCTTTAATTTCAGGAGTGCCCCAATGGGTGTTATCCT CTCGATTATCTGTGAATTGATAATAAAACCTCAGTCTGCAATAAGAGAACATCCTTTGTTTTAAGGAGAATTCTAATTGC ACTAAATTTATCCCATTTTGAACTTGACAAGATTTACATTAAATTGATTCTACTTCTCCACTGCCTCACAACGTCCATAT GCTTAAGTTGGTCTAGGCAGTTTTCATTAAACGCTCTAAGGAAAGCTGATTTAATGGAAACTCCGGAAGAGTTGTTTATG ATTCTTTAACATGCCGGCATTGGGTATGAAACTAGTGTTCTTTTTGGCAGTATGAGGGAACATGACAGAGCAACAATACA TGAAGCCATGGAGCAGCAGACAATAAGTGTTGCCAAGGTAGAATATTTGAATATTATGCAAAATCTGAATGAACTTCAGC TTTCTTCAATCTTCGAAACAGAAGTAAACTTACATTGGCTGGTTTATGGTAAAAAAAAGTTTGGCTACTGATTAACTCTC ACTTTATCCAGGCTGGTCTTGTAACAACACTCAGCACTAAAACTACAGTATTTGGCGCTACAAATCCTAAGGGACAATAT GATCCTGATCAACGTATCCCTTTAGTCAATGTACATTTGTTTAATACTATTCAAACCTGGTGTCAAATTATGGTTTCTGT TACTCTTAATGTTAAGAATAACTGCACCGTCAATATATCAACAGCAGTGGTAGCTGCATAATGTCTGAAATAGTTTACTG TTGCTTCCGTTCAATACTTGTCTGACTTAACACGAAGGAAGCTCTGTCCGTCAATACAACACTCTCTGGTCCTTTGTTAA GCAGGTTTGATATTGTCCTTGTGCTCTTGGATACAAAGAATCCTGAATGGGATGTAGTAGTTTCATCTCATATTCTTTCT GAGGTAATGTGAATCCCTCTTCAATGCATACAACTTCATATGGATTAAGATTATAATACCTGTATGAAAACTATATCCAG GCAGAACCTGATAAAACCAACAATGATGAAGATCTAGCAAATATCTGGCCTCTTTCCATACTCAAGAGGTAAAGTATGAA GCTAAAGGTCATGGCTATTGGCTAACCTGACTCTGTAGAAAAATGAAGTAAAAACTTAAACCGGTGTTACACTTTTGGGT GCGTCGTCTATTTTGTTTTTATCATATTTGAACATTGGCAGAAAATTAGGAATCTAGAATTTAGATTTAATTTCTCTTCT CTAACTTGATTTTGAGCCCCATAGCTTCATGATTATGGTTGCATTTTGAAGCTGCAGCTGCTCATAATTTTAGGATTACT TTAGTCCCCCAATGTTTTGACGTTATTTGAAGAATAACTTGCATATGTGATTCCTTTTTTTCTTTTGGTAGCAAGATGAG CCATTTTTTTCCATGAACAAGTAATGAAAATATAGTGGAATCAGTTATGTGACAATTTCAATTTCCAACGAGTTCCTTTT ATCCTATAGAATGCTTTTTAAAACAGATCTATTTTTTTCCAATTTTCTTAAAGACTCTTTGTTACTTACATTAGTGAAAA ACAATTCTGCAGGTATATACACTATGTGAAAGCAAAATTCAGACCCGTCCTTACAAGAGAGGCTGAAATAGTTATATCCA GCTATTATCAACTTCAAAGGAAATCTGCAACTGATAATGCAGGTTTGACCTAGAAACGTTTATTTCTAATTTGAGCCTAA TGCTCAATATATGTCATTTTATTTAGTATCGAATTCGCAATGTAGCTAGGACAACTGTGCGCATGCTGGAAAGTTTGATA CGCCTAGCTCAAGGTATGTATGCGACTGGCACTGGGTGAATCTTCTCTTTTCAACTTCCTGGTCAATTTTCCTACTACTC ATTTGTGCTTTTACTCTTTACTTGTCGCAGCTCACGCGAGACTAATGTTCAGAAATGAGGTGACTCGACTAGATGCGATC ACGGCTATTTTATGCATAGAATCCTCCATGACAACCTCAGCTATTGTGGATTGCATTGGGAATGCCCTGCATTCCAATTT TACTGAAAATCCTGATCAGGAATGTATCCTTGCTATCTTTCTTTCTTTGCATCATGTAGCTTTACATAAATTTTTGCAAC AACAACAATCAAGCCTTATCCTAGTAATTGGGGTGGAATACATGGATCAATTAACGCCATTGGGCACTATTAAAAAACCA AAATTTCAGTAAAGCCATTGATGTTGTGGTGGTTTTATTCTCAAACATAATAAAGGGGTACAGATAAGTAATGGTCTTCA TTTAGATCACAACTTCACATGGAAATTTTTTGACGTCAATTTTTCACAGGAAGGCAAGTGAATGGAAATTCATTTTGTGC ATAGCTAAATAGTATTATTGTTTAATGTTCTGGACTTCTGCTTTCATTTGCTTCACCTACAACTTCTTGACTACACAATA AAACAGATGCTAAGCAAGAAAGATTGATCCTAAAAAAATTGGGATCAATAGAAGACTTCACTGACATGAATAGCATGGTG GACTGAAAGCAAGGAAAAAGAAACAAAACGGAAGATTCGTGTATCTGTTAGAGTAAAATATAATGTTTTTCCTATTGTGG CTTTGTCTATAATTTTGATTCTTCATGTACTTTTCTGATGGACCCATGTTGAGTTCTTCTGAGATATAAGTAAGCATTGT TTTTCTTGTAAAGTTAAGCACACTTTCATTCAATCATTTATCTATATTAATTATATGAGGTAGTGCTCCACTGATACACC ATCATATACATCTTGAATCTTGATTTGCCTTATTTTGGGATCGTTGTGTATGTTATGGAGGTTCATTTATGGTTAAATTG TATTTTGCTGGTTCATAGAAAAAATGATTATAAAATTAGTTTCATCGATTAGTCCCAA
CDS sequence (LotjaGi6g1v0351000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAGAACACCGAGGATCCAGGTCACTGGAAGAAGCCAATGGCCAGCTACCTCGTCCGCCACCATCCCGATCAGCT CAACTCCATTGCTTCTTCTCCCGATCCCAACATTCATTACCCTCTTCACATCGATTTCGCTGAGTTGATGGAAGATGATC ATCGCATTGCCCATCTCCTCTTTGCCCAACCCAACACCTACCTGCAAATCTTCGATGACGCTGCTCTCTGGGCTCATAAA ATTGTATTGGGAGATATGGAGGAAGGGGTTGAGAAAAAATTCATTCATGTTCGCGTTAACGTCTGCGGCTCTCCCCTTGA ATGCCCTGAGACTTTTCCGAGCATAGGACGTGTTCGAGTGCAGCACCGTGGAATCCTTCTCACTCTCAAAGGGATAGTGA TCAGGTCCGGAGCGATCAAGATGCATGAAGGAGAGAGGAAATACATGTGTCAAAAATGCCAAAGCAGGTCTGTTGATTAT CAATTAACAAAGCATGTGTGCAGCTTCCCAGTTTATCCTGAGGTGGAAGCTCGAAACGCCATATCATTACCCTCATTTTG CCCAATTCAGAGGTCTAAGCCCTGTGGAGGTGTAAAATTCCAGTATGTAGAGAATACTATAGTATGTCATGATTATCAGG AGATAAAAATCCAAGAAAGTACACAGGTGCTAGGTGTTGGGGCAATTCCTCGTTCAATTCTTGTCATCTTGAAGGATGAC CTTGTTGATGTTGTTAAAGCTGGAGATGATGTGATTGTCACTGGTCTCTTAACAGCAAAGTGGTCTCCAGAGTTGAAGGA TGTGCGCTGTGACCTTGATCCTGTTTTGATAGCCAACAGCATAAGGAGAATCAATGAACTGAAGTCAGAAATTGATATTT CCGATGATCTTGTTACGAAATTCAAGCAGTTTTGGGATCACTTCAAAGATGCGCCTTTAAAAGCAGGGAGGAATGCCATT CTACGAGCAGTTTGCCCACAAGTATTTGGTCTTTTCACAGTCAAGCTGGCTGTTGCATTAACACTTATTGGAGGTGTGCA ACATGTCGATGCTTCTGGAACAAGGGTAAGAGGGGAGTCCCACTTACTCTTGGTTGGTGATCCTGGAACTGGGAAATCTC AGTTTCTGAAATTTGCTGCAAAATTAAGCAACCGATCTGTTATTACCACTGGGTTGGGAAGCACAAGTGCAGGATTGACT TGGATGTTGGAAGCTGGAGCCCTTGTCTTGGCAGATGGAGGCTTGTGTTGCATAGATGAGTTTGACAGTATGAGGGAACA TGACAGAGCAACAATACATGAAGCCATGGAGCAGCAGACAATAAGTGTTGCCAAGGCTGGTCTTGTAACAACACTCAGCA CTAAAACTACAGTATTTGGCGCTACAAATCCTAAGGGACAATATGATCCTGATCAACGAAGCTCTGTCCGTCAATACAAC ACTCTCTGGTCCTTTGTTAAGCAGGTTTGA
Protein sequence (LotjaGi6g1v0351000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKNTEDPGHWKKPMASYLVRHHPDQLNSIASSPDPNIHYPLHIDFAELMEDDHRIAHLLFAQPNTYLQIFDDAALWAHK IVLGDMEEGVEKKFIHVRVNVCGSPLECPETFPSIGRVRVQHRGILLTLKGIVIRSGAIKMHEGERKYMCQKCQSRSVDY QLTKHVCSFPVYPEVEARNAISLPSFCPIQRSKPCGGVKFQYVENTIVCHDYQEIKIQESTQVLGVGAIPRSILVILKDD LVDVVKAGDDVIVTGLLTAKWSPELKDVRCDLDPVLIANSIRRINELKSEIDISDDLVTKFKQFWDHFKDAPLKAGRNAI LRAVCPQVFGLFTVKLAVALTLIGGVQHVDASGTRVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLT WMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTKTTVFGATNPKGQYDPDQRSSVRQYN TLWSFVKQV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 14 | 476 | 463 | 4.7E-186 | ||
| PANTHER | 14 | 476 | 463 | 4.7E-186 | – | |
| SUPERFAMILY | 39 | 265 | 227 | 3.26E-38 | ||
| SMART | 111 | 486 | 376 | 1.3E-23 | ||
| Pfam | 118 | 258 | 141 | 4.9E-22 | ||
| Gene3D | 118 | 275 | 158 | 3.1E-29 | – | |
| Gene3D | 145 | 206 | 62 | 3.1E-29 | – | |
| Gene3D | 313 | 484 | 172 | 6.9E-65 | – | |
| ProSiteProfiles | 316 | 464 | 149 | 50.255 | ||
| Pfam | 318 | 473 | 156 | 7.7E-55 | ||
| CDD | 319 | 476 | 158 | 2.42736E-103 | – | |
| SUPERFAMILY | 326 | 476 | 151 | 8.95E-25 | ||
| PRINTS | 357 | 372 | 16 | 1.8E-20 | ||
| SMART | 358 | 485 | 128 | 0.0032 | ||
| PRINTS | 406 | 420 | 15 | 1.8E-20 | ||
| PRINTS | 434 | 447 | 14 | 1.8E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | DNA replication initiation | The process in which DNA-dependent DNA replication is started; this begins with the ATP dependent loading of an initiator complex onto the DNA, this is followed by DNA melting and helicase activity. In bacteria, the gene products that enable the helicase activity are loaded after the initial melting and in archaea and eukaryotes, the gene products that enable the helicase activity are inactive when they are loaded and subsequently activate. |
Expression pattern of LotjaGi6g1v0351000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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