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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001471
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 317 results. Now displaying 2 of 7 with 50 rows per page. This search has taken 6.120s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v2377980.1
n.a. DRE-binding protein 2D;1 [Glycine max] gi|407829661|gb|AFU35564.1| chr1 28094436 28096722 -
7 domain predictions
2 GO terms
Lj1g3v2623740.1
n.a. PREDICTED: ethylene-responsive transcription factor 4-like [Glycine max] gi|356522656|ref|XP_003529962.1| chr1 30375401 30376809 -
7 domain predictions
2 GO terms
Lj1g3v2841300.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor BBM2-like [Glycine max] gi|356568527|ref|XP_003552462.1| chr1 32376328 32377583 -
4 domain predictions
2 GO terms
Lj1g3v2926270.1
n.a. PREDICTED: ethylene-responsive transcription factor 1-like [Cicer arietinum] gi|502106430|ref|XP_004492940.1| chr1 32989493 32990631 +
7 domain predictions
2 GO terms
Lj1g3v2952280.1
n.a. PREDICTED: ethylene-responsive transcription factor WRI1-like [Glycine max] gi|356529949|ref|XP_003533548.1| chr1 33458580 33460718 -
6 domain predictions
2 GO terms
Lj1g3v3137730.1
n.a. Ethylene-responsive transcription factor [Medicago truncatula] gi|357502687|ref|XP_003621632.1| chr1 35668523 35671179 +
7 domain predictions
2 GO terms
Lj1g3v3560250.1
n.a. PREDICTED: ethylene-responsive transcription factor-like protein At4g13040-like [Glycine max] gi|356567816|ref|XP_003552111.1| chr1 40953910 40959923 -
4 domain predictions
2 GO terms
Lj1g3v3560250.2
n.a. PREDICTED: ethylene-responsive transcription factor-like protein At4g13040-like [Glycine max] gi|356567816|ref|XP_003552111.1| chr1 40953910 40959923 -
4 domain predictions
2 GO terms
Lj1g3v3904450.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF113-like [Glycine max] gi|356561162|ref|XP_003548854.1| chr1 45505006 45507137 +
7 domain predictions
2 GO terms
Lj1g3v3930420.1
n.a. PREDICTED: ethylene-responsive transcription factor LEP-like [Cicer arietinum] gi|502107665|ref|XP_004493337.1| chr1 45893034 45894258 +
7 domain predictions
2 GO terms
Lj1g3v3975310.1
n.a. transcription factor ERF [Medicago truncatula] gi|116831753|gb|ABK28850.1| chr1 46803645 46805698 -
7 domain predictions
2 GO terms
Lj1g3v4241090.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710-like isoform X1 [Cicer arietinum] gi|502108710|ref|XP_004493481.1| chr1 50100411 50104276 -
6 domain predictions
2 GO terms
Lj1g3v4467980.1
n.a. PREDICTED: ethylene-responsive transcription factor 3-like [Cicer arietinum] gi|502109900|ref|XP_004493753.1| chr1 52369702 52370451 -
7 domain predictions
2 GO terms
Lj1g3v4483640.1
n.a. PREDICTED: ethylene-responsive transcription factor 15-like [Glycine max] gi|356503610|ref|XP_003520600.1| chr1 52622762 52623916 +
7 domain predictions
2 GO terms
Lj1g3v4578960.1
n.a. PREDICTED: ethylene-responsive transcription factor RAP2-7-like [Cicer arietinum] gi|502111031|ref|XP_004493938.1| chr1 54394393 54396920 +
6 domain predictions
2 GO terms
Lj1g3v4578960.2
n.a. Transcription factor [Medicago truncatula] gi|357510563|ref|XP_003625570.1| chr1 54394393 54396920 +
7 domain predictions
2 GO terms
Lj1g3v4809900.1
n.a. PREDICTED: dehydration-responsive element-binding protein 3-like [Cicer arietinum] gi|502138606|ref|XP_004503470.1| chr1 58092849 58093997 +
7 domain predictions
2 GO terms
Lj1g3v4865580.1
n.a. ethylene-responsive element binding factor 4 [Arachis hypogaea] gi|407317207|gb|AFU07641.1| chr1 59080176 59081573 -
7 domain predictions
2 GO terms
Lj1g3v5035060.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF023-like [Cicer arietinum] gi|502114012|ref|XP_004494833.1| chr1 61630794 61632778 +
3 domain predictions
2 GO terms
Lj2g3v0740680.1
n.a. PREDICTED: ethylene-responsive transcription factor CRF4-like [Brachypodium distachyon] gi|357135778|ref|XP_003569485.1| chr2 11608992 11609488 +
7 domain predictions
2 GO terms
Lj2g3v0856580.1
n.a. Ethylene-responsive transcription factor RAP2-9 [Medicago truncatula] gi|357465925|ref|XP_003603247.1| chr2 13327881 13328624 +
7 domain predictions
2 GO terms
Lj2g3v1068730.1
n.a. Ethylene-responsive transcription factor [Medicago truncatula] gi|357496535|ref|XP_003618556.1| chr2 17197142 17198566 +
7 domain predictions
2 GO terms
Lj2g3v1171110.1
n.a. PREDICTED: AP2/ERF and B3 domain-containing transcription repressor TEM1-like [Glycine max] gi|356495986|ref|XP_003516851.1| chr2 18503477 18506021 +
6 domain predictions
2 GO terms
Lj2g3v1338880.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor ANT-like [Glycine max] gi|356570045|ref|XP_003553203.1| chr2 21034957 21036437 -
6 domain predictions
2 GO terms
Lj2g3v1437080.1
n.a. AP2/ERF domain-containing transcription factor [Medicago truncatula] gi|357485637|ref|XP_003613106.1| chr2 22636420 22636857 +
7 domain predictions
2 GO terms
Lj2g3v1891000.1
n.a. PREDICTED: floral homeotic protein APETALA 2-like [Glycine max] gi|356496919|ref|XP_003517312.1| chr2 28137356 28140243 -
7 domain predictions
2 GO terms
Lj2g3v1892040.1
n.a. Ethylene-responsive transcription factor RAP2-10 [Medicago truncatula] gi|357482801|ref|XP_003611687.1| chr2 28157388 28159148 -
7 domain predictions
2 GO terms
Lj2g3v1989190.1
n.a. transcription factor AP2-EREBP [Lotus japonicus] gi|193237565|dbj|BAG50059.1| chr2 29788974 29790907 -
7 domain predictions
2 GO terms
Lj2g3v1989210.1
n.a. PREDICTED: ethylene-responsive transcription factor 5-like [Glycine max] gi|356541103|ref|XP_003539022.1| chr2 29802474 29804053 +
7 domain predictions
2 GO terms
Lj2g3v2000320.1
n.a. dehydration-responsive element binding protein 6 [Glycine max] gi|351726616|ref|NP_001235341.1| chr2 29874957 29875744 +
7 domain predictions
2 GO terms
Lj2g3v2016210.1
n.a. PREDICTED: dehydration-responsive element-binding protein 1F-like isoform 1 [Glycine max] gi|356497210|ref|XP_003517455.1| chr2 30728618 30729292 -
6 domain predictions
2 GO terms
Lj2g3v2087840.1
n.a. PREDICTED: ethylene-responsive transcription factor CRF2-like [Glycine max] gi|356540410|ref|XP_003538682.1| chr2 31379461 31381432 +
7 domain predictions
2 GO terms
Lj2g3v2113110.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF021-like [Glycine max] gi|356540377|ref|XP_003538666.1| chr2 31839490 31840065 -
7 domain predictions
2 GO terms
Lj2g3v2114130.1
n.a. Ethylene-responsive transcription factor [Medicago truncatula] gi|357481275|ref|XP_003610923.1| chr2 31854224 31855328 +
7 domain predictions
2 GO terms
Lj2g3v2447140.1
n.a. PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like [Glycine max] gi|356500950|ref|XP_003519293.1| chr2 34548511 34550648 -
7 domain predictions
2 GO terms
Lj2g3v2877180.1
n.a. PREDICTED: ethylene-responsive transcription factor 3-like [Glycine max] gi|356501259|ref|XP_003519443.1| chr2 37389705 37392351 -
7 domain predictions
2 GO terms
Lj2g3v2877190.1
n.a. n.a. chr2 37391022 37392078 +
7 domain predictions
2 GO terms
Lj2g3v2902380.1
n.a. CM0545.620.nc [Lotus japonicus] gi|164564747|dbj|BAF98227.1| chr2 37780554 37784704 -
7 domain predictions
2 GO terms
Lj2g3v3209730.1
n.a. PREDICTED: ethylene-responsive transcription factor 3-like [Glycine max] gi|356552847|ref|XP_003544774.1| chr2 41079076 41080003 -
7 domain predictions
2 GO terms
Lj3g3v0014470.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF003-like [Cicer arietinum] gi|502174548|ref|XP_004515544.1| chr3 333676 334744 +
7 domain predictions
2 GO terms
Lj3g3v0273570.1
n.a. PREDICTED: dehydration-responsive element-binding protein 3-like [Glycine max] gi|356547379|ref|XP_003542090.1| chr3 1620963 1622044 +
6 domain predictions
2 GO terms
Lj3g3v0429220.1
n.a. ethylene response factor 3 [Solanum tuberosum] gi|118490009|gb|ABK96798.1| chr3 4254694 4255299 +
7 domain predictions
2 GO terms
Lj3g3v0509780.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF034-like [Glycine max] gi|356504603|ref|XP_003521085.1| chr3 5862553 5864010 -
7 domain predictions
2 GO terms
Lj3g3v0538480.1
n.a. PREDICTED: ethylene-responsive transcription factor 2-like [Glycine max] gi|356520778|ref|XP_003529037.1| chr3 6088408 6089506 +
7 domain predictions
2 GO terms
Lj3g3v0548550.1
n.a. PREDICTED: ethylene-responsive transcription factor 2-like [Glycine max] gi|356520778|ref|XP_003529037.1| chr3 6099971 6101200 +
7 domain predictions
2 GO terms
Lj3g3v0719980.1
n.a. PREDICTED: ethylene-responsive transcription factor-like protein At4g13040-like [Cicer arietinum] gi|502155948|ref|XP_004510251.1| chr3 8099854 8105031 +
4 domain predictions
2 GO terms
Lj3g3v1778650.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor PLT2-like [Glycine max] gi|356541922|ref|XP_003539421.1| chr3 22562002 22564825 +
7 domain predictions
2 GO terms
Lj3g3v2060630.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060-like [Cicer arietinum] gi|502148088|ref|XP_004507033.1| chr3 26520278 26523230 -
6 domain predictions
2 GO terms
Lj3g3v2060630.2
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060-like [Cicer arietinum] gi|502148088|ref|XP_004507033.1| chr3 26520278 26524367 -
7 domain predictions
2 GO terms
Lj3g3v2060630.3
n.a. AP2 domain-containing transcription factor [Populus trichocarpa] gi|224072757|ref|XP_002303866.1| chr3 26523511 26525179 -
5 domain predictions
2 GO terms