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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR032675
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 2134 results. Now displaying 7 of 43 with 50 rows per page. This search has taken 6.365s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0312539.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720-like [Cicer arietinum] gi|502135453|ref|XP_004502339.1| chr0 163172056 163178144 +
3 domain predictions
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Lj0g3v0313469.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase RCH1-like [Glycine max] gi|356566445|ref|XP_003551442.1| chr0 163689060 163694316 -
3 domain predictions
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Lj0g3v0314179.1
n.a. PREDICTED: FBD-associated F-box protein At5g56370-like [Cicer arietinum] gi|502076975|ref|XP_004485511.1| chr0 163931544 163933385 +
2 domain predictions
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Lj0g3v0314529.1
n.a. PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X1 [Cicer arietinum] gi|502175296|ref|XP_004515704.1| chr0 164171821 164175134 +
2 domain predictions
 –
Lj0g3v0314529.2
n.a. PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X1 [Cicer arietinum] gi|502175296|ref|XP_004515704.1| chr0 164171821 164175134 +
3 domain predictions
 –
Lj0g3v0315179.1
n.a. F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|357510183|ref|XP_003625380.1| chr0 164550347 164551546 -
2 domain predictions
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Lj0g3v0316159.1
n.a. PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine max] gi|356527370|ref|XP_003532284.1| chr0 165084630 165086556 +
2 domain predictions
 –
Lj0g3v0317379.1
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357459929|ref|XP_003600246.1| chr0 165805840 165811436 +
3 domain predictions
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Lj0g3v0317389.1
n.a. n.a. chr0 165807030 165810658 -
3 domain predictions
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Lj0g3v0318669.1
n.a. PREDICTED: disease resistance protein RGA2 [Vitis vinifera] gi|225456041|ref|XP_002277479.1| chr0 166437791 166440873 +
3 domain predictions
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Lj0g3v0319519.1
n.a. F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|357510183|ref|XP_003625380.1| chr0 166807997 166809997 -
2 domain predictions
 –
Lj0g3v0321129.1
n.a. PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X1 [Cicer arietinum] gi|502142314|ref|XP_004504896.1| chr0 167637420 167638874 -
2 domain predictions
 –
Lj0g3v0321149.1
n.a. PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X1 [Cicer arietinum] gi|502142314|ref|XP_004504896.1| chr0 167643676 167645685 -
2 domain predictions
 –
Lj0g3v0321329.1
n.a. PREDICTED: tyrosine-sulfated glycopeptide receptor 1-like [Glycine max] gi|356551263|ref|XP_003543996.1| chr0 167769164 167770124 +
3 domain predictions
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Lj0g3v0326739.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357458385|ref|XP_003599473.1| chr0 170806577 170810402 -
3 domain predictions
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Lj0g3v0327369.1
n.a. Rj2 protein [Glycine max] gi|295083311|gb|ADF78109.1| chr0 171143800 171144670 -
3 domain predictions
 –
Lj0g3v0327379.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356570335|ref|XP_003553345.1| chr0 171143800 171146496 -
3 domain predictions
 –
Lj0g3v0327379.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356570335|ref|XP_003553345.1| chr0 171143800 171147442 -
3 domain predictions
 –
Lj0g3v0327379.3
n.a. Rj2 protein [Glycine max] gi|295083307|gb|ADF78107.1| chr0 171143800 171147442 -
3 domain predictions
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Lj0g3v0327379.4
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356570335|ref|XP_003553345.1| chr0 171143800 171147442 -
3 domain predictions
 –
Lj0g3v0327439.1
n.a. disease resistance protein/LRR protein-related protein precursor [Glycine max] gi|351724553|ref|NP_001235526.1| chr0 171171664 171174112 -
3 domain predictions
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Lj0g3v0328359.1
n.a. PREDICTED: disease resistance protein RPM1-like [Glycine max] gi|356524195|ref|XP_003530717.1| chr0 171646292 171649686 -
3 domain predictions
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Lj0g3v0328559.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830-like [Cicer arietinum] gi|502122925|ref|XP_004497940.1| chr0 171728076 171731884 -
3 domain predictions
 –
Lj0g3v0328979.1
n.a. n.a. chr0 171974264 171979359 +
3 domain predictions
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Lj0g3v0329479.1
n.a. PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine max] gi|356527370|ref|XP_003532284.1| chr0 172241540 172244749 -
2 domain predictions
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Lj0g3v0329609.1
n.a. disease resistance protein [Glycine max] gi|351734460|ref|NP_001235512.1| chr0 172319366 172321769 +
3 domain predictions
 –
Lj0g3v0330469.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase RCH1-like [Glycine max] gi|356527419|ref|XP_003532308.1| chr0 172708068 172710394 -
3 domain predictions
 –
Lj0g3v0330479.1
n.a. n.a. chr0 172708068 172709935 +
3 domain predictions
 –
Lj0g3v0330549.1
n.a. Nbs-lrr resistance protein [Medicago truncatula] gi|357490917|ref|XP_003615746.1| chr0 172745051 172749240 -
3 domain predictions
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Lj0g3v0330549.2
n.a. NBS resistance protein [Medicago truncatula] gi|357472003|ref|XP_003606286.1| chr0 172746156 172749240 -
3 domain predictions
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Lj0g3v0330669.1
n.a. somatic embryogenesis receptor kinase-like protein 3 [Medicago truncatula] gi|308154500|gb|ADO15297.1| chr0 172824652 172830231 +
3 domain predictions
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Lj0g3v0331039.1
n.a. Receptor protein kinase-like protein, partial [Medicago truncatula] gi|358344142|ref|XP_003636151.1| chr0 172997688 172998801 -
2 domain predictions
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Lj0g3v0331049.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Cicer arietinum] gi|502148812|ref|XP_004507279.1| chr0 173005144 173009117 -
3 domain predictions
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Lj0g3v0331109.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356506778|ref|XP_003522153.1| chr0 173038503 173053389 +
3 domain predictions
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Lj0g3v0331339.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356573485|ref|XP_003554889.1| chr0 173160736 173169872 -
3 domain predictions
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Lj0g3v0331339.3
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 173162194 173169872 -
3 domain predictions
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Lj0g3v0331689.1
n.a. PREDICTED: F-box protein FBW2-like [Cicer arietinum] gi|502130410|ref|XP_004500641.1| chr0 173540043 173542729 +
2 domain predictions
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Lj0g3v0332709.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Glycine max] gi|356569387|ref|XP_003552883.1| chr0 174114063 174116111 -
3 domain predictions
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Lj0g3v0333079.1
n.a. PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine max] gi|356527370|ref|XP_003532284.1| chr0 174303097 174304479 -
2 domain predictions
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Lj0g3v0333829.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like isoform X1 [Cicer arietinum] gi|502096406|ref|XP_004490727.1| chr0 174724986 174726946 +
3 domain predictions
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Lj0g3v0333849.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356497765|ref|XP_003517729.1| chr0 174729003 174736727 +
3 domain predictions
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Lj0g3v0334209.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Cicer arietinum] gi|502158646|ref|XP_004511229.1| chr0 174915542 174918441 +
3 domain predictions
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Lj0g3v0334209.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Cicer arietinum] gi|502158646|ref|XP_004511229.1| chr0 174915542 174918441 +
3 domain predictions
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Lj0g3v0334929.1
n.a. PREDICTED: F-box protein SKIP19-like [Glycine max] gi|356555512|ref|XP_003546075.1| chr0 175330375 175330585 +
2 domain predictions
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Lj0g3v0336229.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like [Glycine max] gi|356506579|ref|XP_003522057.1| chr0 176102747 176107250 -
3 domain predictions
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Lj0g3v0336439.1
n.a. PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X1 [Cicer arietinum] gi|502142314|ref|XP_004504896.1| chr0 176177420 176178682 +
3 domain predictions
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Lj0g3v0336609.1
n.a. PREDICTED: F-box protein At3g62230-like [Cucumis sativus] gi|449463581|ref|XP_004149512.1| chr0 176313618 176315408 -
2 domain predictions
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Lj0g3v0336659.1
n.a. PREDICTED: F-box protein At3g62230-like [Vitis vinifera] gi|359494023|ref|XP_002281469.2| chr0 176329108 176329589 -
2 domain predictions
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Lj0g3v0337299.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356542401|ref|XP_003539655.1| chr0 176639095 176648358 +
3 domain predictions
 –
Lj0g3v0338669.1
n.a. PREDICTED: F-box protein FBW2-like isoform 1 [Glycine max] gi|356508073|ref|XP_003522785.1| chr0 177342638 177345074 +
2 domain predictions
 –