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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0327439 |
| Transcript ID | Lj0g3v0327439.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | disease resistance protein/LRR protein-related protein precursor [Glycine max] gi|351724553|ref|NP_001235526.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 30 | 30 | – | – | |
| SignalP | 1 | 30 | 30 | – | – | |
| Phobius | 1 | 30 | 30 | – | – | |
| Phobius | 1 | 13 | 13 | – | – | |
| TMHMM | 7 | 26 | 20 | – | – | |
| PANTHER | 11 | 484 | 474 | 2.40E-245 | – | |
| PANTHER | 11 | 484 | 474 | 2.40E-245 | – | |
| Phobius | 14 | 26 | 13 | – | – | |
| Phobius | 27 | 30 | 4 | – | – | |
| Phobius | 31 | 485 | 455 | – | – | |
| Gene3D | 32 | 252 | 221 | 7.10E-55 | ||
| Pfam | 36 | 73 | 38 | 1.90E-12 | ||
| SUPERFAMILY | 63 | 444 | 382 | 1.39E-57 | ||
| SMART | 132 | 156 | 25 | 36 | ||
| Pfam | 134 | 156 | 23 | 1.6 | ||
| Pfam | 158 | 217 | 60 | 2.80E-12 | ||
| SMART | 180 | 203 | 24 | 160 | ||
| SMART | 204 | 227 | 24 | 31 | ||
| Gene3D | 254 | 481 | 228 | 1.40E-34 | ||
| Pfam | 254 | 314 | 61 | 4.60E-08 | ||
| SMART | 277 | 300 | 24 | 99 | ||
| SMART | 441 | 470 | 30 | 160 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0327439.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0327439.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.