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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0330479 |
| Transcript ID | Lj0g3v0330479.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 78 | 78 | 4.70E-215 | – | |
| SignalP | 1 | 27 | 27 | – | – | |
| PANTHER | 1 | 78 | 78 | 4.70E-215 | – | |
| Phobius | 1 | 27 | 27 | – | – | |
| Phobius | 1 | 10 | 10 | – | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| Phobius | 11 | 22 | 12 | – | – | |
| Phobius | 23 | 27 | 5 | – | – | |
| Phobius | 28 | 548 | 521 | – | – | |
| Gene3D | 42 | 244 | 203 | 8.30E-53 | ||
| SUPERFAMILY | 96 | 418 | 323 | 1.10E-70 | – | |
| PANTHER | 103 | 548 | 446 | 4.70E-215 | – | |
| PANTHER | 103 | 548 | 446 | 4.70E-215 | – | |
| Pfam | 115 | 175 | 61 | 2.00E-08 | ||
| ProSiteProfiles | 116 | 138 | 23 | 5.302 | ||
| SMART | 138 | 162 | 25 | 1.4 | ||
| ProSiteProfiles | 140 | 163 | 24 | 5.956 | ||
| ProSiteProfiles | 164 | 187 | 24 | 5.771 | ||
| Gene3D | 245 | 411 | 167 | 4.40E-54 | ||
| Pfam | 261 | 321 | 61 | 2.10E-08 | ||
| ProSiteProfiles | 262 | 285 | 24 | 5.64 | ||
| SMART | 284 | 307 | 24 | 15 | ||
| ProSiteProfiles | 286 | 309 | 24 | 7.92 | ||
| SMART | 308 | 332 | 25 | 27 | ||
| ProSiteProfiles | 310 | 333 | 24 | 5.471 | ||
| SMART | 356 | 380 | 25 | 25 | ||
| SUPERFAMILY | 356 | 545 | 190 | 2.69E-46 | ||
| ProSiteProfiles | 358 | 381 | 24 | 6.434 | ||
| PRINTS | 359 | 372 | 14 | 3.20E-05 | – | |
| ProSiteProfiles | 382 | 404 | 23 | 5.194 | ||
| Gene3D | 412 | 544 | 133 | 8.60E-32 | ||
| SMART | 428 | 452 | 25 | 13 | ||
| PRINTS | 428 | 441 | 14 | 3.20E-05 | – | |
| ProSiteProfiles | 430 | 452 | 23 | 6.334 | ||
| SMART | 453 | 476 | 24 | 390 | ||
| ProSiteProfiles | 454 | 476 | 23 | 6.133 | ||
| ProSiteProfiles | 478 | 500 | 23 | 4.516 | ||
| SMART | 524 | 548 | 25 | 300 | ||
| ProSiteProfiles | 526 | 547 | 22 | 5.494 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0330479.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0330479.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.