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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0336229 |
| Transcript ID | Lj0g3v0336229.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like [Glycine max] gi|356506579|ref|XP_003522057.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | – | – | |
| SignalP | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 28 | 28 | – | – | |
| PANTHER | 2 | 192 | 191 | 0 | – | |
| PANTHER | 2 | 192 | 191 | 0 | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| Phobius | 5 | 16 | 12 | – | – | |
| Phobius | 17 | 28 | 12 | – | – | |
| Phobius | 29 | 802 | 774 | – | – | |
| Pfam | 32 | 73 | 42 | 9.90E-09 | ||
| SUPERFAMILY | 56 | 346 | 291 | 1.81E-41 | ||
| Gene3D | 62 | 294 | 233 | 3.30E-37 | ||
| SMART | 101 | 124 | 24 | 170 | ||
| ProSiteProfiles | 103 | 125 | 23 | 5.109 | ||
| PANTHER | 220 | 292 | 73 | 0 | – | |
| PANTHER | 220 | 292 | 73 | 0 | – | |
| SMART | 233 | 256 | 24 | 49 | ||
| ProSiteProfiles | 235 | 256 | 22 | 4.593 | ||
| SUPERFAMILY | 279 | 612 | 334 | 4.08E-56 | ||
| Gene3D | 295 | 531 | 237 | 1.20E-49 | ||
| Pfam | 329 | 343 | 15 | 1.6 | ||
| PANTHER | 336 | 378 | 43 | 0 | – | |
| PANTHER | 336 | 378 | 43 | 0 | – | |
| SMART | 353 | 377 | 25 | 22 | ||
| ProSiteProfiles | 355 | 377 | 23 | 5.656 | ||
| SMART | 376 | 404 | 29 | 18 | – | |
| ProSiteProfiles | 378 | 400 | 23 | 7.08 | ||
| Pfam | 378 | 398 | 21 | 1 | ||
| PRINTS | 379 | 392 | 14 | 1.70E-05 | – | |
| ProSiteProfiles | 404 | 427 | 24 | 5.171 | ||
| SMART | 426 | 447 | 22 | 19 | ||
| ProSiteProfiles | 428 | 449 | 22 | 6.295 | ||
| Pfam | 450 | 465 | 16 | 0.57 | ||
| ProSiteProfiles | 452 | 474 | 23 | 5.733 | ||
| PANTHER | 453 | 800 | 348 | 0 | – | |
| PANTHER | 453 | 800 | 348 | 0 | – | |
| SMART | 499 | 520 | 22 | 86 | – | |
| SMART | 499 | 532 | 34 | 390 | ||
| PRINTS | 499 | 512 | 14 | 1.70E-05 | – | |
| ProSiteProfiles | 501 | 522 | 22 | 6.357 | ||
| Pfam | 527 | 586 | 60 | 4.10E-09 | ||
| ProSiteProfiles | 528 | 549 | 22 | 5.279 | ||
| Gene3D | 532 | 781 | 250 | 1.70E-56 | ||
| ProSiteProfiles | 551 | 573 | 23 | 6.072 | ||
| SUPERFAMILY | 567 | 798 | 232 | 9.69E-35 | ||
| SMART | 573 | 599 | 27 | 150 | ||
| SMART | 573 | 595 | 23 | 360 | – | |
| ProSiteProfiles | 575 | 597 | 23 | 7.727 | ||
| ProSiteProfiles | 599 | 620 | 22 | 5.633 | ||
| ProSiteProfiles | 669 | 690 | 22 | 5.91 | ||
| ProSiteProfiles | 694 | 716 | 23 | 5.063 | ||
| ProSiteProfiles | 718 | 739 | 22 | 5.841 | ||
| Pfam | 719 | 777 | 59 | 2.20E-08 | ||
| SMART | 740 | 759 | 20 | 180 | – | |
| ProSiteProfiles | 742 | 761 | 20 | 4.893 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0336229.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0336229.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.