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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001245
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 1129 results. Now displaying 3 of 23 with 50 rows per page. This search has taken 7.092s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0272349.1
n.a. Protein kinase 2B [Medicago truncatula] gi|357477519|ref|XP_003609045.1| chr0 141118608 141123310 +
2 domain predictions
2 GO terms
Lj0g3v0272349.2
n.a. Protein kinase 2B [Medicago truncatula] gi|357477519|ref|XP_003609045.1| chr0 141118608 141123310 +
2 domain predictions
2 GO terms
Lj0g3v0272349.3
n.a. Protein kinase 2B [Medicago truncatula] gi|357477519|ref|XP_003609045.1| chr0 141118608 141123310 +
2 domain predictions
2 GO terms
Lj0g3v0272399.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730-like [Glycine max] gi|356549811|ref|XP_003543284.1| chr0 141143469 141148061 -
2 domain predictions
2 GO terms
Lj0g3v0275229.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39020-like [Glycine max] gi|356573827|ref|XP_003555057.1| chr0 142757370 142760533 -
2 domain predictions
2 GO terms
Lj0g3v0275229.2
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124170|ref|XP_004498415.1| chr0 142757370 142760533 -
2 domain predictions
2 GO terms
Lj0g3v0275229.4
n.a. PREDICTED: probable receptor-like protein kinase At5g39020-like [Glycine max] gi|356573827|ref|XP_003555057.1| chr0 142757370 142761799 -
2 domain predictions
2 GO terms
Lj0g3v0276029.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g29180-like isoform X2 [Cicer arietinum] gi|502164208|ref|XP_004513082.1| chr0 143146225 143150724 -
2 domain predictions
2 GO terms
Lj0g3v0276029.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g29180-like isoform X1 [Cicer arietinum] gi|502164205|ref|XP_004513081.1| chr0 143146225 143151476 -
2 domain predictions
2 GO terms
Lj0g3v0280369.1
n.a. Kinase-like protein [Medicago truncatula] gi|357497887|ref|XP_003619232.1| chr0 145407173 145407943 +
2 domain predictions
2 GO terms
Lj0g3v0281699.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840-like [Cicer arietinum] gi|502165279|ref|XP_004513505.1| chr0 146062372 146066727 +
2 domain predictions
2 GO terms
Lj0g3v0286449.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51880-like [Glycine max] gi|356556621|ref|XP_003546622.1| chr0 148819423 148823480 -
2 domain predictions
2 GO terms
Lj0g3v0287239.1
n.a. PREDICTED: probable receptor-like protein kinase At5g47070-like [Glycine max] gi|356522988|ref|XP_003530124.1| chr0 149260720 149264131 +
2 domain predictions
2 GO terms
Lj0g3v0290409.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 29-like isoform 1 [Glycine max] gi|356575759|ref|XP_003556004.1| chr0 150766053 150767565 +
2 domain predictions
2 GO terms
Lj0g3v0297679.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X1 [Cicer arietinum] gi|502124177|ref|XP_004498418.1| chr0 154740552 154748264 +
2 domain predictions
2 GO terms
Lj0g3v0300219.1
n.a. PREDICTED: U-box domain-containing protein 33-like isoform X1 [Cicer arietinum] gi|502081919|ref|XP_004487010.1| chr0 155968328 155976601 +
2 domain predictions
2 GO terms
Lj0g3v0300569.1
n.a. PREDICTED: mitogen-activated protein kinase kinase kinase 10-like [Cicer arietinum] gi|502129436|ref|XP_004500303.1| chr0 156189453 156193311 -
3 domain predictions
2 GO terms
Lj0g3v0306269.1
n.a. PREDICTED: U-box domain-containing protein 35-like [Glycine max] gi|356522380|ref|XP_003529824.1| chr0 159774491 159775286 -
2 domain predictions
2 GO terms
Lj0g3v0308999.1
n.a. PREDICTED: tyrosine-protein kinase Lck-like [Glycine max] gi|356526029|ref|XP_003531622.1| chr0 161371987 161375877 -
2 domain predictions
2 GO terms
Lj0g3v0309109.2
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357452493|ref|XP_003596523.1| chr0 161458536 161460340 +
2 domain predictions
2 GO terms
Lj0g3v0310539.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230-like [Glycine max] gi|356510976|ref|XP_003524208.1| chr0 162205293 162208324 -
2 domain predictions
2 GO terms
Lj0g3v0310929.1
n.a. n.a. chr0 162403467 162406443 +
2 domain predictions
2 GO terms
Lj0g3v0310949.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Glycine max] gi|356496074|ref|XP_003516895.1| chr0 162403467 162406700 -
2 domain predictions
2 GO terms
Lj0g3v0312539.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720-like [Cicer arietinum] gi|502135453|ref|XP_004502339.1| chr0 163172056 163178144 +
2 domain predictions
2 GO terms
Lj0g3v0314509.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Glycine max] gi|356574206|ref|XP_003555242.1| chr0 164154056 164154894 +
2 domain predictions
2 GO terms
Lj0g3v0318359.1
n.a. Kinase superfamily protein isoform 1 [Theobroma cacao] gi|508712563|gb|EOY04460.1| chr0 166272986 166276961 +
2 domain predictions
2 GO terms
Lj0g3v0318359.2
n.a. Kinase superfamily protein isoform 1 [Theobroma cacao] gi|508712563|gb|EOY04460.1| chr0 166272986 166276961 +
2 domain predictions
2 GO terms
Lj0g3v0320669.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514935|ref|XP_003526157.1| chr0 167352280 167353569 +
2 domain predictions
2 GO terms
Lj0g3v0321389.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Cicer arietinum] gi|502083045|ref|XP_004487351.1| chr0 167813554 167814424 +
2 domain predictions
2 GO terms
Lj0g3v0328979.1
n.a. n.a. chr0 171974264 171979359 +
2 domain predictions
2 GO terms
Lj0g3v0330589.1
n.a. LysM type receptor kinase [Lotus japonicus] gi|290490572|dbj|BAI79273.1| chr0 172770359 172775285 +
2 domain predictions
2 GO terms
Lj0g3v0331979.1
n.a. Protein kinase-coding resistance protein [Medicago truncatula] gi|357444671|ref|XP_003592613.1| chr0 173690665 173691874 -
2 domain predictions
2 GO terms
Lj0g3v0334209.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Cicer arietinum] gi|502158646|ref|XP_004511229.1| chr0 174915542 174918441 +
2 domain predictions
2 GO terms
Lj0g3v0334209.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390-like [Cicer arietinum] gi|502158646|ref|XP_004511229.1| chr0 174915542 174918441 +
2 domain predictions
2 GO terms
Lj0g3v0342799.1
n.a. PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770-like [Glycine max] gi|356518897|ref|XP_003528113.1| chr0 179721799 179728136 -
2 domain predictions
2 GO terms
Lj0g3v0346559.1
n.a. PREDICTED: receptor-like protein kinase THESEUS 1-like [Glycine max] gi|356543264|ref|XP_003540082.1| chr0 181802771 181806732 +
2 domain predictions
2 GO terms
Lj0g3v0346599.1
n.a. Kinase-like protein [Medicago truncatula] gi|357439117|ref|XP_003589835.1| chr0 181818400 181819393 +
2 domain predictions
2 GO terms
Lj0g3v0351279.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380-like isoform X1 [Cicer arietinum] gi|502155784|ref|XP_004510191.1| chr0 184699959 184703503 +
2 domain predictions
2 GO terms
Lj0g3v0351729.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum] gi|502127648|ref|XP_004499785.1| chr0 184940717 184947979 +
2 domain predictions
2 GO terms
Lj0g3v0356809.1
n.a. PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2-like [Glycine max] gi|356495063|ref|XP_003516400.1| chr0 187910217 187913635 -
2 domain predictions
2 GO terms
Lj0g3v0356899.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Cicer arietinum] gi|502084183|ref|XP_004487641.1| chr0 187938143 187941462 -
2 domain predictions
2 GO terms
Lj0g3v0358399.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357453577|ref|XP_003597066.1| chr0 188648804 188654509 -
2 domain predictions
2 GO terms
Lj0g3v0361919.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g20940-like isoform X1 [Cicer arietinum] gi|502080122|ref|XP_004486464.1| chr0 190714722 190719641 +
2 domain predictions
2 GO terms
Lj0g3v0361919.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g20940-like isoform X1 [Cicer arietinum] gi|502080122|ref|XP_004486464.1| chr0 190714835 190719641 +
2 domain predictions
2 GO terms
Lj1g3v0052330.1
n.a. cysteine-rich protein precursor [Glycine max] gi|351721533|ref|NP_001238492.1| chr1 448340 451345 -
2 domain predictions
2 GO terms
Lj1g3v0052360.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357480739|ref|XP_003610655.1| chr1 459111 462277 -
2 domain predictions
2 GO terms
Lj1g3v0114180.1
n.a. PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Cicer arietinum] gi|502159045|ref|XP_004511375.1| chr1 1302128 1306278 +
3 domain predictions
2 GO terms
Lj1g3v0177810.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410-like, partial [Vitis vinifera] gi|359497026|ref|XP_003635401.1| chr1 2016830 2021310 +
2 domain predictions
2 GO terms
Lj1g3v0395850.1
n.a. Serine/threonine-protein kinase/endoribonuclease ire-1 [Triticum urartu] gi|474390985|gb|EMS65329.1| chr1 4499654 4500778 +
2 domain predictions
2 GO terms
Lj1g3v0410200.1
n.a. Fibroblast growth factor receptor [Medicago truncatula] gi|357461999|ref|XP_003601281.1| chr1 4711893 4716725 -
3 domain predictions
2 GO terms