Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj0g3v0361919.1

Overview

Field Value
Gene ID Lj0g3v0361919
Transcript ID Lj0g3v0361919.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g20940-like isoform X1 [Cicer arietinum] gi|502080122|ref|XP_004486464.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 324 324 0
PANTHER 1 324 324 0
Phobius 1 278 278
SUPERFAMILY 5 240 236 9.42E-39
Gene3D 6 137 132 2.20E-26
Pfam 54 109 56 2.80E-09
PRINTS 99 112 14 8.60E-05
Pfam 122 182 61 3.30E-09
Gene3D 143 239 97 6.10E-23
PRINTS 145 158 14 8.60E-05
TMHMM 279 301 23
Phobius 279 302 24
Gene3D 291 312 22 1.60E-10
Phobius 303 704 402
MobiDBLite 349 386 38
PANTHER 395 701 307 0
PANTHER 395 701 307 0
Gene3D 396 473 78 1.60E-10
ProSiteProfiles 423 704 282 27.863
SUPERFAMILY 426 701 276 7.12E-48
Pfam 427 624 198 2.80E-29
Gene3D 474 626 153 8.20E-28

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

LORE1 insertions 19

Expression data

Expression pattern

Expression pattern of Lj0g3v0361919.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0361919.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.