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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0300219 |
| Transcript ID | Lj0g3v0300219.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: U-box domain-containing protein 33-like isoform X1 [Cicer arietinum] gi|502081919|ref|XP_004487010.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 17 | 135 | 119 | 7.00E-10 | ||
| SUPERFAMILY | 17 | 136 | 120 | 1.26E-06 | – | |
| CDD | 30 | 164 | 135 | 3.75E-33 | – | |
| Coils | 268 | 288 | 21 | – | – | |
| Coils | 324 | 344 | 21 | – | – | |
| PANTHER | 381 | 791 | 411 | 6.80E-259 | – | |
| PANTHER | 381 | 791 | 411 | 6.80E-259 | – | |
| Gene3D | 430 | 462 | 33 | 2.20E-04 | ||
| SUPERFAMILY | 434 | 710 | 277 | 3.10E-60 | ||
| ProSiteProfiles | 450 | 716 | 267 | 31.708 | ||
| Pfam | 455 | 706 | 252 | 1.50E-37 | ||
| Gene3D | 463 | 510 | 48 | 1.10E-19 | – | |
| Gene3D | 511 | 714 | 204 | 9.20E-38 | – | |
| SUPERFAMILY | 721 | 793 | 73 | 4.94E-23 | – | |
| ProSiteProfiles | 723 | 794 | 72 | 33.094 | ||
| Gene3D | 723 | 791 | 69 | 7.40E-24 | ||
| Pfam | 724 | 793 | 70 | 1.10E-16 | ||
| SMART | 727 | 790 | 64 | 5.00E-25 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
Expression pattern of Lj0g3v0300219.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0300219.1, powered by CORGI.
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