Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006534
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 73 results. Now displaying 2 of 2 with 50 rows per page. This search has taken 7.241s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi4g1v0284000.3
n.a. Plasma membrane ATPase; TAIR: AT3G42640.1 H -ATPase 8; Swiss-Prot: sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type; TrEMBL-Plants: tr|I1LZM3|I1LZM3_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0284000 LjG1.1_chr4 65620202 65625401 -
3 domain predictions
3 GO terms
LotjaGi4g1v0284000.4
n.a. Plasma membrane ATPase; TAIR: AT3G42640.1 H -ATPase 8; Swiss-Prot: sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type; TrEMBL-Plants: tr|I1LZM3|I1LZM3_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0284000 LjG1.1_chr4 65620202 65625580 -
3 domain predictions
3 GO terms
LotjaGi4g1v0284000.5
n.a. Plasma membrane ATPase; TAIR: AT3G42640.1 H -ATPase 8; Swiss-Prot: sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type; TrEMBL-Plants: tr|I1LZM3|I1LZM3_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0284000 LjG1.1_chr4 65620202 65625692 -
3 domain predictions
3 GO terms
LotjaGi4g1v0284000.6
n.a. Plasma membrane ATPase; TAIR: AT3G42640.1 H -ATPase 8; Swiss-Prot: sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type; TrEMBL-Plants: tr|I1LZM3|I1LZM3_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0284000 LjG1.1_chr4 65620887 65625689 -
3 domain predictions
3 GO terms
LotjaGi4g1v0302900.1
n.a. Plasma membrane ATPase; TAIR: AT4G30190.1 H -ATPase 2; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|Q9SAW3|Q9SAW3_VICFA Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0302900 LjG1.1_chr4 67807480 67814700 +
3 domain predictions
3 GO terms
LotjaGi4g1v0302900.2
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|Q9SAW3|Q9SAW3_VICFA Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0302900 LjG1.1_chr4 67809190 67813757 +
3 domain predictions
3 GO terms
LotjaGi4g1v0302900.3
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|Q9SAW3|Q9SAW3_VICFA Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0302900 LjG1.1_chr4 67809270 67813757 +
3 domain predictions
3 GO terms
LotjaGi4g1v0302900.4
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|Q9SAW3|Q9SAW3_VICFA Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0302900 LjG1.1_chr4 67809341 67813757 +
3 domain predictions
3 GO terms
LotjaGi4g1v0302900.5
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|Q9SAW3|Q9SAW3_VICFA Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0302900 LjG1.1_chr4 67809383 67813757 +
3 domain predictions
3 GO terms
LotjaGi4g1v0302900.6
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|Q9SAW3|Q9SAW3_VICFA Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0302900 LjG1.1_chr4 67809397 67813757 +
3 domain predictions
3 GO terms
LotjaGi4g1v0302900.7
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|Q9SAW3|Q9SAW3_VICFA Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0302900 LjG1.1_chr4 67809681 67813757 +
3 domain predictions
3 GO terms
LotjaGi5g1v0066100.1
n.a. Plasma membrane ATPase; TAIR: AT2G24520.2 plasma membrane H+-ATPase; Swiss-Prot: sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase; TrEMBL-Plants: tr|V7CSZ4|V7CSZ4_PHAVU Plasma membrane ATPase; Found in the gene: LotjaGi5g1v0066100 LjG1.1_chr5 10988824 10994480 +
3 domain predictions
3 GO terms
LotjaGi6g1v0206900.1
n.a. Plasma membrane ATPase; TAIR: AT3G42640.1 H -ATPase 8; Swiss-Prot: sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type; TrEMBL-Plants: tr|A0A1J7GA71|A0A1J7GA71_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0206900 LjG1.1_chr6 50450903 50456651 +
3 domain predictions
3 GO terms
LotjaGi6g1v0206900.2
n.a. Plasma membrane ATPase; TAIR: AT3G42640.1 H -ATPase 8; Swiss-Prot: sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type; TrEMBL-Plants: tr|I1LZM3|I1LZM3_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0206900 LjG1.1_chr6 50451441 50456186 +
3 domain predictions
3 GO terms
LotjaGi6g1v0240600.1
n.a. Plasma membrane ATPase; TAIR: AT2G24520.2 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|I1MGZ2|I1MGZ2_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55216846 55226511 -
3 domain predictions
3 GO terms
LotjaGi6g1v0240600.2
n.a. Plasma membrane ATPase; TAIR: AT2G24520.2 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|I1MGZ2|I1MGZ2_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55217692 55226486 -
3 domain predictions
3 GO terms
LotjaGi6g1v0240600.3
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|I1MGZ2|I1MGZ2_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218212 55222181 -
3 domain predictions
3 GO terms
LotjaGi6g1v0240600.4
n.a. Plasma membrane ATPase; TAIR: AT2G24520.2 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|G7JUD3|G7JUD3_MEDTR Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218212 55222743 -
3 domain predictions
3 GO terms
LotjaGi6g1v0240600.5
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|A0A0L9UAP3|A0A0L9UAP3_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218212 55223020 -
3 domain predictions
3 GO terms
LotjaGi6g1v0240600.6
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|A0A0L9UAP3|A0A0L9UAP3_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218212 55223059 -
3 domain predictions
3 GO terms
LotjaGi6g1v0240600.7
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|A0A0L9UAP3|A0A0L9UAP3_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218212 55223108 -
3 domain predictions
3 GO terms
LotjaGi6g1v0240600.8
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|A0A0L9UAP3|A0A0L9UAP3_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218212 55223111 -
3 domain predictions
3 GO terms
LotjaGi6g1v0240600.9
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|A0A0L9UAP3|A0A0L9UAP3_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218495 55223065 -
3 domain predictions
3 GO terms