Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0302900 |
| Transcript ID | LotjaGi4g1v0302900.5 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|Q9SAW3|Q9SAW3_VICFA Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0302900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:67809383..67813757) extracted from Lotus japonicus Gifu genome v1.2.
TGTAAATATGATAAGTCAGGTTTCTAAATATTTTATAAACTTTTTGATGATTTACAGGAACGTATCCCTGTTGAGGAAGT GTTCCAGCAGTTGAAATGTACCCCAGAAGGTTTGTCTTCGGAGGAAGGAGCCAGTCGGCTTCAAATATTTGGGCCAAACA AGCTAGAGGAGAAAAAGGTTCCTAGCTTTTTGAACATTGGTTAACATATCCAAGATTATACTGTTAATGAAATGCAATTA CTGATTGGTAATGATTTCAATGATATAGGAAAGCAAACTGCTCAAGTTTCTTGGGTTCATGTGGAATCCTCTTTCATGGG TCATGGAAATGGCAGCCATTATGGCAATTGCTCTTGCAAATGGTGGTGGGAAGCCCCCAGATTGGCAAGATTTTCTGGGT ATTATTTGCTTGCTGGTGATCAACTCCACCATCAGTTTCATTGAAGAAAACAATGCTGGTAATGCTGCAGCTGCTCTCAT GGCTGGTCTTGCTCCCAAGACAAAGGTATGTGTCTGTGTCCTGCACCTAGTAGCTGTGTATGCATATGACCCTAAAGATA TGTGTGGTTAATGAGACCTTGTTTTGTTACAAGTTAAATGTTATTCAAGTGTTTGATTTAATATCTGACTCCAAATTCTC ATAGGTTCTTAGAGATGGTAAATGGTCTGAGCAAGAAGCTGCAGTTCTTGTCCCTGGAGACATCATAAGCATCAAACTAG GTGATATTGTTCCTGCTGATGCCCGTCTTCTTGAGGGTGATCCTTTAAAAATTGATCAATCTGCTTTGACTGGAGAGTCA CTTCCTGTGAACAAGAATCCTGGGGATGAGGTTTTCTCTGGATCAACTTGCAAACAGGGTGAAATTGAAGCTATTGTCAT TGCAACTGGTGTCCACACATTTTTCGGGAAAGCAGCTCACCTGGTGGATAGTACTAACCAAGTTGGACATTTCCAGAAGG TGCTTACAGCAATTGGAAACTTCTGTATTTGTTCCATTGCAGTTGGTATGATAGCTGAGATCATAGTCATGTACCCGATT CAGGACCGTAAATATAGAGACGGAATTGACAACCTTTTGGTCCTCTTGATTGGAGGAATTCCCATTGCTATGCCCACTGT GTTGTCTGTGACAATGGCCATTGGTTCTCACAGGCTCTCTCAGCAAGGTGCTATCACCAAGCGAATGACTGCCATTGAAG AAATGGCTGGTATGGATGTTCTTTGCAGTGACAAGACGGGTACTCTAACGCTTAACAAGCTTACTGTTGACAAGAACTTG ATTGAAGTCTTCGAAAAGGGTGTGGACAAGGAACATGTACTGCTCCTTGCTGCAAGGGCTTCCAGGACTGAAAACCAGGA TGCAATAGATGCTGCTGTTGTTGGAACACTTGCTGACCCAAAAGAGGTTTGACCATCAACTATTGCTTTACTTTTAGTTC ATTGCTAGAAAATTGTTGATGTGACTGATTATATTGATCAAATCTGTGCGCACTATGCAGGCAAGGGCTGGGGTAAGAGA GGTGCACTTCTTACCATTTAACCCTGTTGACAAGAGAACTGCTTTAACATACATTGATTCTCAAGGAAATTGGCACAGGG CAAGCAAAGGTGCTCCTGAGCAGGTAACCTCAAGATTCAGTTTGTTTAGTGTTGGTTAGATTTCCAGTCACACAATTGAT GCTAACATTTATGTGGTGCACAGATCATGACGCTGTGTAACCTCAGGGAAGATACTAAGAAGAAGGTTCATGCTATGATT GACAAGTTTGCAGAAAGAGGGCTTCGTTCCCTTGCTGTGTCTAGACAGGTTTGTATTGCTAGTTTCATGTATGAAGTTTA TGTTGAAACTTTGGATTTCCTTCACTGAGCCCCTTGCTCATCTGTGCTACTTCTGCAGGAAGTTCCTGAGAAAACAAAAG AAAGCGCTGGTGGGCCTTGGCAGTTTGTTGGTTTGTTGTCATTGTTTGACCCCCCTAGACATGATAGTGCTGAGACTATT CGTAGAGCTCTTCATCTTGGTGTTAATGTCAAGATGATTACTGGTACCTACTCTAATTCCCCCTTTTATCTATGTCTCTC TTCTTTGCGATAGTACTTATTATCAAGTATCCGCAAGTTAATATCCTTGCTCGTGTTCTACTCTCCAGGTGATCAACTTG CCATAGCTAAGGAGACTGGCCGGAGACTCGGGATGGGAACTAATATGTACCCATCTTCTACCTTGCTTGGCCAGGATAAA GATGCCAGCATTGCCGCACTTCCCGTAGAAGAGTTGATTGAGAAAGCAGATGGTTTTGCTGGAGTATTTCCAGGTTCATG TTCTTCACCATTTCATTTTGATGATTTTTGTTTATCTTCATTCCTTCTCCTTTTGTTCTTTGAAATGTTATATTTCTTAA TTTTGTCCTTATCATCTCTTATTTACACCTACAGAGCACAAATATGAAATTGTGAAGAAGTTGCAAGAGAGGAAGCACAT TTGTGGAATGACTGGTGATGGTGTCAATGATGCTCCTGCTTTGAAGAGGGCTGATATTGGAATTGCTGTTGCTGATGCTA CTGATGCTGCAAGGGGTGCCTCTGATATTGTTTTGACTGAACCTGGATTGAGTGTTATTGTTAGTGCAGTCTTAACTAGC CGAGCTATTTTCCAAAGAATGAAGAACTATACGGTTGGTTGCTGTCTGCTTTCTTCATGAACATAGTCTCTTTTGCTCTC TGTTTCCGAACTAATACTGTTTGTGTTATTTTCTTTGTATTTCAGATATATGCAGTATCTATCACTATCCGTATAGTGGT AAGTAGATAATAATATTTTCACTGTATATAATTCTTGATGAAAAAAATGTGAAAAATATTCATTAGTTTGGGTTCTCAAC TTTTTCCCCTGAATGCAGTTTGGTTTCATGTTCATTGCACTGATCTGGAAATTTGACTTCTCTCCTTTTATGGTTTTGAT TATTGCCGTTCTAAATGACGGTAAGGCTCTTTGCAAATATTCCTTTTAAACTTGAACTCTCTTCATGACTATTCTGATTG GCAATGGAGGTCTGACACAGTAGTTATCATACTAACAGGAACAATCATGACAATTTCAAAAGATAGGGTGAAGCCATCTC CCTTGCCTGATAGTTGGAAACTGAATGAAATATTTGCTACTGGGGTTGTTCTTGGAAGTTATTTAGCACTGATGACTGTC ATTTTCTTCTGGGCAATGCACGAAACCCACTTCTTCCCTGTAAGGAACATTCCAGTGGCCTATACTCAATATTTTGTATT TTGTTTTTCATCAAATATATAACCTACCCTTGATTATCTTTTTGCAGGACAAATTTGGAGTTAGACACCTGACTCATGAT GAAATGATGTCTGCTCTGTATCTGCAAGTCAGTATAGTTAGCCAGGCTCTGATATTTGTAACGCGTTCCCGTGGCTGGTC GTTTGTTGAACGCCCTGGATTGCTATTAGTCGTTGCTTTCATTATTGCTCAACTGGTAAGGATGATACTTCCATTTACTC TTTCAGAGTTGTTTGTAGGCATGCAACTAAATGAGTTTTCTTCTCACAATTCACATGAGAGAAATGTGAAATGAATAATA TTTTGACTATATGATTTTGCAGATTGCTACAATCATAGCAGTATATGCTGACTGGGGTTTTGCAAAGGTCAAAGGGATTG GTTGGGGTTGGGCAGGAGTCATCTGGCTCTACAGTATTGTTTTCTATGTACCTCTTGATTTGATGAAGTTCGCCATCCGC TACATTTTGAGTGGCAAGGCTTGGTTAAATATGCTAGAAAACAAGGTACTTGTTAATCAGCTTTTCTCTTTCTCAAAGAG TGAAAGATTTTCATGAGAATGCATATGAATTGTTGTTTCAAAATGCATGACAGACTGCCTTCACCACCAAGAAAGACTAC GGAAAAGAGGAGCGCGAAGCTCAGTGGGCTCTTGCTCAGAGGACTCTGCATGGACTTCAACCACCAGAGACTTCTGGCAT TTTCAATGAAAAGAGCAGTTACAGAGAACTCTCTGAGATTGCTGAGCAGGCCAAGAGAAGAGCAGAAGTTGCAAGGTAAG AAATTAACCACACCACCCTTGAGTACTTTACTTCTGAGATTACTAGCATGTTTGGACCAACTTGTCTTTACTCAGAATCA ATTGTAAAATGGTTTCCAAACTATCCACTACTATAATCGAATACTATATGAAGATTTAAATCCAGATGTTATTGTTATAG TTCTAATACGTGAATTTTGTTTCTTCTCTACACTACAGGCTTCGCGAGCTTCACACTCTTAAGGGACATGTGGAGTCTGT GGTGAAGCTGAAGGGTCTTGATATTGATACTATCCAGCAGCACTACACCGTATGA
CDS sequence (LotjaGi4g1v0302900.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGAATCCTCTTTCATGGGTCATGGAAATGGCAGCCATTATGGCAATTGCTCTTGCAAATGGTGGTGGGAAGCCCCC AGATTGGCAAGATTTTCTGGGTATTATTTGCTTGCTGGTGATCAACTCCACCATCAGTTTCATTGAAGAAAACAATGCTG GTAATGCTGCAGCTGTTCTTAGAGATGGTAAATGGTCTGAGCAAGAAGCTGCAGTTCTTGTCCCTGGAGACATCATAAGC ATCAAACTAGGTGATATTGTTCCTGCTGATGCCCGTCTTCTTGAGGGTGATCCTTTAAAAATTGATCAATCTGCTTTGAC TGGAGAGTCACTTCCTGTGAACAAGAATCCTGGGGATGAGGTTTTCTCTGGATCAACTTGCAAACAGGGTGAAATTGAAG CTATTGTCATTGCAACTGGTGTCCACACATTTTTCGGGAAAGCAGCTCACCTGGTGGATAGTACTAACCAAGTTGGACAT TTCCAGAAGGTGCTTACAGCAATTGGAAACTTCTGTATTTGTTCCATTGCAGTTGGTATGATAGCTGAGATCATAGTCAT GTACCCGATTCAGGACCGTAAATATAGAGACGGAATTGACAACCTTTTGGTCCTCTTGATTGGAGGAATTCCCATTGCTA TGCCCACTGTGTTGTCTGTGACAATGGCCATTGGTTCTCACAGGCTCTCTCAGCAAGGTGCTATCACCAAGCGAATGACT GCCATTGAAGAAATGGCTGGTATGGATGTTCTTTGCAGTGACAAGACGGGTACTCTAACGCTTAACAAGCTTACTGTTGA CAAGAACTTGATTGAAGTCTTCGAAAAGGGTGTGGACAAGGAACATGTACTGCTCCTTGCTGCAAGGGCTTCCAGGACTG AAAACCAGGATGCAATAGATGCTGCTGTTGTTGGAACACTTGCTGACCCAAAAGAGGCAAGGGCTGGGGTAAGAGAGGTG CACTTCTTACCATTTAACCCTGTTGACAAGAGAACTGCTTTAACATACATTGATTCTCAAGGAAATTGGCACAGGGCAAG CAAAGGTGCTCCTGAGCAGATCATGACGCTGTGTAACCTCAGGGAAGATACTAAGAAGAAGGTTCATGCTATGATTGACA AGTTTGCAGAAAGAGGGCTTCGTTCCCTTGCTGTGTCTAGACAGGAAGTTCCTGAGAAAACAAAAGAAAGCGCTGGTGGG CCTTGGCAGTTTGTTGGTTTGTTGTCATTGTTTGACCCCCCTAGACATGATAGTGCTGAGACTATTCGTAGAGCTCTTCA TCTTGGTGTTAATGTCAAGATGATTACTGGTGATCAACTTGCCATAGCTAAGGAGACTGGCCGGAGACTCGGGATGGGAA CTAATATGTACCCATCTTCTACCTTGCTTGGCCAGGATAAAGATGCCAGCATTGCCGCACTTCCCGTAGAAGAGTTGATT GAGAAAGCAGATGGTTTTGCTGGAGTATTTCCAGAGCACAAATATGAAATTGTGAAGAAGTTGCAAGAGAGGAAGCACAT TTGTGGAATGACTGGTGATGGTGTCAATGATGCTCCTGCTTTGAAGAGGGCTGATATTGGAATTGCTGTTGCTGATGCTA CTGATGCTGCAAGGGGTGCCTCTGATATTGTTTTGACTGAACCTGGATTGAGTGTTATTGTTAGTGCAGTCTTAACTAGC CGAGCTATTTTCCAAAGAATGAAGAACTATACGATATATGCAGTATCTATCACTATCCGTATAGTGTTTGGTTTCATGTT CATTGCACTGATCTGGAAATTTGACTTCTCTCCTTTTATGGTTTTGATTATTGCCGTTCTAAATGACGGAACAATCATGA CAATTTCAAAAGATAGGGTGAAGCCATCTCCCTTGCCTGATAGTTGGAAACTGAATGAAATATTTGCTACTGGGGTTGTT CTTGGAAGTTATTTAGCACTGATGACTGTCATTTTCTTCTGGGCAATGCACGAAACCCACTTCTTCCCTGACAAATTTGG AGTTAGACACCTGACTCATGATGAAATGATGTCTGCTCTGTATCTGCAAGTCAGTATAGTTAGCCAGGCTCTGATATTTG TAACGCGTTCCCGTGGCTGGTCGTTTGTTGAACGCCCTGGATTGCTATTAGTCGTTGCTTTCATTATTGCTCAACTGATT GCTACAATCATAGCAGTATATGCTGACTGGGGTTTTGCAAAGGTCAAAGGGATTGGTTGGGGTTGGGCAGGAGTCATCTG GCTCTACAGTATTGTTTTCTATGTACCTCTTGATTTGATGAAGTTCGCCATCCGCTACATTTTGAGTGGCAAGGCTTGGT TAAATATGCTAGAAAACAAGACTGCCTTCACCACCAAGAAAGACTACGGAAAAGAGGAGCGCGAAGCTCAGTGGGCTCTT GCTCAGAGGACTCTGCATGGACTTCAACCACCAGAGACTTCTGGCATTTTCAATGAAAAGAGCAGTTACAGAGAACTCTC TGAGATTGCTGAGCAGGCCAAGAGAAGAGCAGAAGTTGCAAGGCTTCGCGAGCTTCACACTCTTAAGGGACATGTGGAGT CTGTGGTGAAGCTGAAGGGTCTTGATATTGATACTATCCAGCAGCACTACACCGTATGA
Protein sequence (LotjaGi4g1v0302900.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWNPLSWVMEMAAIMAIALANGGGKPPDWQDFLGIICLLVINSTISFIEENNAGNAAAVLRDGKWSEQEAAVLVPGDIIS IKLGDIVPADARLLEGDPLKIDQSALTGESLPVNKNPGDEVFSGSTCKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGH FQKVLTAIGNFCICSIAVGMIAEIIVMYPIQDRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMT AIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFEKGVDKEHVLLLAARASRTENQDAIDAAVVGTLADPKEARAGVREV HFLPFNPVDKRTALTYIDSQGNWHRASKGAPEQIMTLCNLREDTKKKVHAMIDKFAERGLRSLAVSRQEVPEKTKESAGG PWQFVGLLSLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSTLLGQDKDASIAALPVEELI EKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTS RAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAVLNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVV LGSYLALMTVIFFWAMHETHFFPDKFGVRHLTHDEMMSALYLQVSIVSQALIFVTRSRGWSFVERPGLLLVVAFIIAQLI ATIIAVYADWGFAKVKGIGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNMLENKTAFTTKKDYGKEEREAQWAL AQRTLHGLQPPETSGIFNEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 852 | 852 | 0.0 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 1 | 852 | 852 | 0.0 | – | |
| Gene3D | 1 | 92 | 92 | 1.8E-28 | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| TIGRFAM | 1 | 727 | 727 | 0.0 | ||
| CDD | 1 | 762 | 762 | 0.0 | ||
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| SUPERFAMILY | 1 | 768 | 768 | 5.36E-71 | ||
| Phobius | 12 | 17 | 6 | - | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| Phobius | 23 | 31 | 9 | - | – | |
| Phobius | 32 | 48 | 17 | - | – | |
| TIGRFAM | 42 | 271 | 230 | 4.6E-35 | ||
| Phobius | 49 | 163 | 115 | - | – | |
| Pfam | 55 | 231 | 177 | 2.2E-47 | – | |
| SUPERFAMILY | 56 | 152 | 97 | 1.03E-28 | ||
| PRINTS | 102 | 116 | 15 | 3.9E-42 | – | |
| Gene3D | 116 | 265 | 150 | 2.1E-15 | – | |
| Phobius | 164 | 190 | 27 | - | – | |
| TMHMM | 165 | 187 | 23 | - | – | |
| Phobius | 191 | 201 | 11 | - | – | |
| TMHMM | 202 | 224 | 23 | - | – | |
| Phobius | 202 | 224 | 23 | - | – | |
| Phobius | 225 | 569 | 345 | - | – | |
| SFLD | 234 | 563 | 330 | 0.0 | – | |
| SFLD | 234 | 563 | 330 | 0.0 | – | |
| SUPERFAMILY | 248 | 558 | 311 | 4.35E-40 | ||
| Pfam | 248 | 525 | 278 | 3.9E-18 | – | |
| PRINTS | 252 | 266 | 15 | 3.9E-42 | – | |
| ProSitePatterns | 254 | 260 | 7 | - | ||
| Gene3D | 266 | 407 | 142 | 2.8E-47 | ||
| PRINTS | 368 | 386 | 19 | 2.7E-59 | ||
| PRINTS | 406 | 417 | 12 | 3.9E-42 | – | |
| Gene3D | 408 | 474 | 67 | 8.5E-6 | ||
| PRINTS | 428 | 438 | 11 | 3.9E-42 | – | |
| PRINTS | 483 | 499 | 17 | 2.7E-59 | ||
| TIGRFAM | 486 | 600 | 115 | 3.0E-28 | ||
| Gene3D | 489 | 767 | 279 | 4.5E-111 | – | |
| PRINTS | 511 | 530 | 20 | 3.9E-42 | – | |
| PRINTS | 511 | 527 | 17 | 2.7E-59 | ||
| PRINTS | 534 | 546 | 13 | 3.9E-42 | – | |
| PRINTS | 542 | 567 | 26 | 2.7E-59 | ||
| Phobius | 570 | 592 | 23 | - | – | |
| TMHMM | 570 | 592 | 23 | - | – | |
| Phobius | 593 | 597 | 5 | - | – | |
| TMHMM | 596 | 613 | 18 | - | – | |
| Phobius | 598 | 615 | 18 | - | – | |
| Phobius | 616 | 634 | 19 | - | – | |
| TMHMM | 634 | 656 | 23 | - | – | |
| Phobius | 635 | 656 | 22 | - | – | |
| Phobius | 657 | 675 | 19 | - | – | |
| TMHMM | 676 | 694 | 19 | - | – | |
| Phobius | 676 | 695 | 20 | - | – | |
| PRINTS | 681 | 702 | 22 | 2.7E-59 | ||
| Phobius | 696 | 706 | 11 | - | – | |
| TMHMM | 706 | 728 | 23 | - | – | |
| Phobius | 707 | 728 | 22 | - | – | |
| Phobius | 729 | 739 | 11 | - | – | |
| TMHMM | 738 | 757 | 20 | - | – | |
| Phobius | 740 | 757 | 18 | - | – | |
| Phobius | 758 | 872 | 115 | - | – | |
| Coils | 823 | 843 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Proton-exporting ATPase activity, phosphorylative mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Proton export across plasma membrane | The directed movement of hydrogen ions (protons) from inside a cell, across the plasma membrane and into the extracellular region. |
Expression pattern of LotjaGi4g1v0302900.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…