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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0302900 |
| Transcript ID | LotjaGi4g1v0302900.4 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|Q9SAW3|Q9SAW3_VICFA Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0302900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:67809341..67813757) extracted from Lotus japonicus Gifu genome v1.2.
TTTCATATCAATAATATATCAGGTCATTAATGTAAACTATCATGTAAATATGATAAGTCAGGTTTCTAAATATTTTATAA ACTTTTTGATGATTTACAGGAACGTATCCCTGTTGAGGAAGTGTTCCAGCAGTTGAAATGTACCCCAGAAGGTTTGTCTT CGGAGGAAGGAGCCAGTCGGCTTCAAATATTTGGGCCAAACAAGCTAGAGGAGAAAAAGGTTCCTAGCTTTTTGAACATT GGTTAACATATCCAAGATTATACTGTTAATGAAATGCAATTACTGATTGGTAATGATTTCAATGATATAGGAAAGCAAAC TGCTCAAGTTTCTTGGGTTCATGTGGAATCCTCTTTCATGGGTCATGGAAATGGCAGCCATTATGGCAATTGCTCTTGCA AATGGTGGTGGGAAGCCCCCAGATTGGCAAGATTTTCTGGGTATTATTTGCTTGCTGGTGATCAACTCCACCATCAGTTT CATTGAAGAAAACAATGCTGGTAATGCTGCAGCTGCTCTCATGGCTGGTCTTGCTCCCAAGACAAAGGTATGTGTCTGTG TCCTGCACCTAGTAGCTGTGTATGCATATGACCCTAAAGATATGTGTGGTTAATGAGACCTTGTTTTGTTACAAGTTAAA TGTTATTCAAGTGTTTGATTTAATATCTGACTCCAAATTCTCATAGGTTCTTAGAGATGGTAAATGGTCTGAGCAAGAAG CTGCAGTTCTTGTCCCTGGAGACATCATAAGCATCAAACTAGGTGATATTGTTCCTGCTGATGCCCGTCTTCTTGAGGGT GATCCTTTAAAAATTGATCAATCTGCTTTGACTGGAGAGTCACTTCCTGTGAACAAGAATCCTGGGGATGAGGTTTTCTC TGGATCAACTTGCAAACAGGGTGAAATTGAAGCTATTGTCATTGCAACTGGTGTCCACACATTTTTCGGGAAAGCAGCTC ACCTGGTGGATAGTACTAACCAAGTTGGACATTTCCAGAAGGTGCTTACAGCAATTGGAAACTTCTGTATTTGTTCCATT GCAGTTGGTATGATAGCTGAGATCATAGTCATGTACCCGATTCAGGACCGTAAATATAGAGACGGAATTGACAACCTTTT GGTCCTCTTGATTGGAGGAATTCCCATTGCTATGCCCACTGTGTTGTCTGTGACAATGGCCATTGGTTCTCACAGGCTCT CTCAGCAAGGTGCTATCACCAAGCGAATGACTGCCATTGAAGAAATGGCTGGTATGGATGTTCTTTGCAGTGACAAGACG GGTACTCTAACGCTTAACAAGCTTACTGTTGACAAGAACTTGATTGAAGTCTTCGAAAAGGGTGTGGACAAGGAACATGT ACTGCTCCTTGCTGCAAGGGCTTCCAGGACTGAAAACCAGGATGCAATAGATGCTGCTGTTGTTGGAACACTTGCTGACC CAAAAGAGGTTTGACCATCAACTATTGCTTTACTTTTAGTTCATTGCTAGAAAATTGTTGATGTGACTGATTATATTGAT CAAATCTGTGCGCACTATGCAGGCAAGGGCTGGGGTAAGAGAGGTGCACTTCTTACCATTTAACCCTGTTGACAAGAGAA CTGCTTTAACATACATTGATTCTCAAGGAAATTGGCACAGGGCAAGCAAAGGTGCTCCTGAGCAGGTAACCTCAAGATTC AGTTTGTTTAGTGTTGGTTAGATTTCCAGTCACACAATTGATGCTAACATTTATGTGGTGCACAGATCATGACGCTGTGT AACCTCAGGGAAGATACTAAGAAGAAGGTTCATGCTATGATTGACAAGTTTGCAGAAAGAGGGCTTCGTTCCCTTGCTGT GTCTAGACAGGTTTGTATTGCTAGTTTCATGTATGAAGTTTATGTTGAAACTTTGGATTTCCTTCACTGAGCCCCTTGCT CATCTGTGCTACTTCTGCAGGAAGTTCCTGAGAAAACAAAAGAAAGCGCTGGTGGGCCTTGGCAGTTTGTTGGTTTGTTG TCATTGTTTGACCCCCCTAGACATGATAGTGCTGAGACTATTCGTAGAGCTCTTCATCTTGGTGTTAATGTCAAGATGAT TACTGGTACCTACTCTAATTCCCCCTTTTATCTATGTCTCTCTTCTTTGCGATAGTACTTATTATCAAGTATCCGCAAGT TAATATCCTTGCTCGTGTTCTACTCTCCAGGTGATCAACTTGCCATAGCTAAGGAGACTGGCCGGAGACTCGGGATGGGA ACTAATATGTACCCATCTTCTACCTTGCTTGGCCAGGATAAAGATGCCAGCATTGCCGCACTTCCCGTAGAAGAGTTGAT TGAGAAAGCAGATGGTTTTGCTGGAGTATTTCCAGGTTCATGTTCTTCACCATTTCATTTTGATGATTTTTGTTTATCTT CATTCCTTCTCCTTTTGTTCTTTGAAATGTTATATTTCTTAATTTTGTCCTTATCATCTCTTATTTACACCTACAGAGCA CAAATATGAAATTGTGAAGAAGTTGCAAGAGAGGAAGCACATTTGTGGAATGACTGGTGATGGTGTCAATGATGCTCCTG CTTTGAAGAGGGCTGATATTGGAATTGCTGTTGCTGATGCTACTGATGCTGCAAGGGGTGCCTCTGATATTGTTTTGACT GAACCTGGATTGAGTGTTATTGTTAGTGCAGTCTTAACTAGCCGAGCTATTTTCCAAAGAATGAAGAACTATACGGTTGG TTGCTGTCTGCTTTCTTCATGAACATAGTCTCTTTTGCTCTCTGTTTCCGAACTAATACTGTTTGTGTTATTTTCTTTGT ATTTCAGATATATGCAGTATCTATCACTATCCGTATAGTGGTAAGTAGATAATAATATTTTCACTGTATATAATTCTTGA TGAAAAAAATGTGAAAAATATTCATTAGTTTGGGTTCTCAACTTTTTCCCCTGAATGCAGTTTGGTTTCATGTTCATTGC ACTGATCTGGAAATTTGACTTCTCTCCTTTTATGGTTTTGATTATTGCCGTTCTAAATGACGGTAAGGCTCTTTGCAAAT ATTCCTTTTAAACTTGAACTCTCTTCATGACTATTCTGATTGGCAATGGAGGTCTGACACAGTAGTTATCATACTAACAG GAACAATCATGACAATTTCAAAAGATAGGGTGAAGCCATCTCCCTTGCCTGATAGTTGGAAACTGAATGAAATATTTGCT ACTGGGGTTGTTCTTGGAAGTTATTTAGCACTGATGACTGTCATTTTCTTCTGGGCAATGCACGAAACCCACTTCTTCCC TGTAAGGAACATTCCAGTGGCCTATACTCAATATTTTGTATTTTGTTTTTCATCAAATATATAACCTACCCTTGATTATC TTTTTGCAGGACAAATTTGGAGTTAGACACCTGACTCATGATGAAATGATGTCTGCTCTGTATCTGCAAGTCAGTATAGT TAGCCAGGCTCTGATATTTGTAACGCGTTCCCGTGGCTGGTCGTTTGTTGAACGCCCTGGATTGCTATTAGTCGTTGCTT TCATTATTGCTCAACTGGTAAGGATGATACTTCCATTTACTCTTTCAGAGTTGTTTGTAGGCATGCAACTAAATGAGTTT TCTTCTCACAATTCACATGAGAGAAATGTGAAATGAATAATATTTTGACTATATGATTTTGCAGATTGCTACAATCATAG CAGTATATGCTGACTGGGGTTTTGCAAAGGTCAAAGGGATTGGTTGGGGTTGGGCAGGAGTCATCTGGCTCTACAGTATT GTTTTCTATGTACCTCTTGATTTGATGAAGTTCGCCATCCGCTACATTTTGAGTGGCAAGGCTTGGTTAAATATGCTAGA AAACAAGGTACTTGTTAATCAGCTTTTCTCTTTCTCAAAGAGTGAAAGATTTTCATGAGAATGCATATGAATTGTTGTTT CAAAATGCATGACAGACTGCCTTCACCACCAAGAAAGACTACGGAAAAGAGGAGCGCGAAGCTCAGTGGGCTCTTGCTCA GAGGACTCTGCATGGACTTCAACCACCAGAGACTTCTGGCATTTTCAATGAAAAGAGCAGTTACAGAGAACTCTCTGAGA TTGCTGAGCAGGCCAAGAGAAGAGCAGAAGTTGCAAGGTAAGAAATTAACCACACCACCCTTGAGTACTTTACTTCTGAG ATTACTAGCATGTTTGGACCAACTTGTCTTTACTCAGAATCAATTGTAAAATGGTTTCCAAACTATCCACTACTATAATC GAATACTATATGAAGATTTAAATCCAGATGTTATTGTTATAGTTCTAATACGTGAATTTTGTTTCTTCTCTACACTACAG GCTTCGCGAGCTTCACACTCTTAAGGGACATGTGGAGTCTGTGGTGAAGCTGAAGGGTCTTGATATTGATACTATCCAGC AGCACTACACCGTATGA
CDS sequence (LotjaGi4g1v0302900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGAATCCTCTTTCATGGGTCATGGAAATGGCAGCCATTATGGCAATTGCTCTTGCAAATGGTGGTGGGAAGCCCCC AGATTGGCAAGATTTTCTGGGTATTATTTGCTTGCTGGTGATCAACTCCACCATCAGTTTCATTGAAGAAAACAATGCTG GTAATGCTGCAGCTGCTCTCATGGCTGGTCTTGCTCCCAAGACAAAGGTTCTTAGAGATGGTAAATGGTCTGAGCAAGAA GCTGCAGTTCTTGTCCCTGGAGACATCATAAGCATCAAACTAGGTGATATTGTTCCTGCTGATGCCCGTCTTCTTGAGGG TGATCCTTTAAAAATTGATCAATCTGCTTTGACTGGAGAGTCACTTCCTGTGAACAAGAATCCTGGGGATGAGGTTTTCT CTGGATCAACTTGCAAACAGGGTGAAATTGAAGCTATTGTCATTGCAACTGGTGTCCACACATTTTTCGGGAAAGCAGCT CACCTGGTGGATAGTACTAACCAAGTTGGACATTTCCAGAAGGTGCTTACAGCAATTGGAAACTTCTGTATTTGTTCCAT TGCAGTTGGTATGATAGCTGAGATCATAGTCATGTACCCGATTCAGGACCGTAAATATAGAGACGGAATTGACAACCTTT TGGTCCTCTTGATTGGAGGAATTCCCATTGCTATGCCCACTGTGTTGTCTGTGACAATGGCCATTGGTTCTCACAGGCTC TCTCAGCAAGGTGCTATCACCAAGCGAATGACTGCCATTGAAGAAATGGCTGGTATGGATGTTCTTTGCAGTGACAAGAC GGGTACTCTAACGCTTAACAAGCTTACTGTTGACAAGAACTTGATTGAAGTCTTCGAAAAGGGTGTGGACAAGGAACATG TACTGCTCCTTGCTGCAAGGGCTTCCAGGACTGAAAACCAGGATGCAATAGATGCTGCTGTTGTTGGAACACTTGCTGAC CCAAAAGAGGCAAGGGCTGGGGTAAGAGAGGTGCACTTCTTACCATTTAACCCTGTTGACAAGAGAACTGCTTTAACATA CATTGATTCTCAAGGAAATTGGCACAGGGCAAGCAAAGGTGCTCCTGAGCAGATCATGACGCTGTGTAACCTCAGGGAAG ATACTAAGAAGAAGGTTCATGCTATGATTGACAAGTTTGCAGAAAGAGGGCTTCGTTCCCTTGCTGTGTCTAGACAGGAA GTTCCTGAGAAAACAAAAGAAAGCGCTGGTGGGCCTTGGCAGTTTGTTGGTTTGTTGTCATTGTTTGACCCCCCTAGACA TGATAGTGCTGAGACTATTCGTAGAGCTCTTCATCTTGGTGTTAATGTCAAGATGATTACTGGTGATCAACTTGCCATAG CTAAGGAGACTGGCCGGAGACTCGGGATGGGAACTAATATGTACCCATCTTCTACCTTGCTTGGCCAGGATAAAGATGCC AGCATTGCCGCACTTCCCGTAGAAGAGTTGATTGAGAAAGCAGATGGTTTTGCTGGAGTATTTCCAGAGCACAAATATGA AATTGTGAAGAAGTTGCAAGAGAGGAAGCACATTTGTGGAATGACTGGTGATGGTGTCAATGATGCTCCTGCTTTGAAGA GGGCTGATATTGGAATTGCTGTTGCTGATGCTACTGATGCTGCAAGGGGTGCCTCTGATATTGTTTTGACTGAACCTGGA TTGAGTGTTATTGTTAGTGCAGTCTTAACTAGCCGAGCTATTTTCCAAAGAATGAAGAACTATACGATATATGCAGTATC TATCACTATCCGTATAGTGTTTGGTTTCATGTTCATTGCACTGATCTGGAAATTTGACTTCTCTCCTTTTATGGTTTTGA TTATTGCCGTTCTAAATGACGGAACAATCATGACAATTTCAAAAGATAGGGTGAAGCCATCTCCCTTGCCTGATAGTTGG AAACTGAATGAAATATTTGCTACTGGGGTTGTTCTTGGAAGTTATTTAGCACTGATGACTGTCATTTTCTTCTGGGCAAT GCACGAAACCCACTTCTTCCCTGACAAATTTGGAGTTAGACACCTGACTCATGATGAAATGATGTCTGCTCTGTATCTGC AAGTCAGTATAGTTAGCCAGGCTCTGATATTTGTAACGCGTTCCCGTGGCTGGTCGTTTGTTGAACGCCCTGGATTGCTA TTAGTCGTTGCTTTCATTATTGCTCAACTGATTGCTACAATCATAGCAGTATATGCTGACTGGGGTTTTGCAAAGGTCAA AGGGATTGGTTGGGGTTGGGCAGGAGTCATCTGGCTCTACAGTATTGTTTTCTATGTACCTCTTGATTTGATGAAGTTCG CCATCCGCTACATTTTGAGTGGCAAGGCTTGGTTAAATATGCTAGAAAACAAGACTGCCTTCACCACCAAGAAAGACTAC GGAAAAGAGGAGCGCGAAGCTCAGTGGGCTCTTGCTCAGAGGACTCTGCATGGACTTCAACCACCAGAGACTTCTGGCAT TTTCAATGAAAAGAGCAGTTACAGAGAACTCTCTGAGATTGCTGAGCAGGCCAAGAGAAGAGCAGAAGTTGCAAGGCTTC GCGAGCTTCACACTCTTAAGGGACATGTGGAGTCTGTGGTGAAGCTGAAGGGTCTTGATATTGATACTATCCAGCAGCAC TACACCGTATGA
Protein sequence (LotjaGi4g1v0302900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWNPLSWVMEMAAIMAIALANGGGKPPDWQDFLGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQE AAVLVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVNKNPGDEVFSGSTCKQGEIEAIVIATGVHTFFGKAA HLVDSTNQVGHFQKVLTAIGNFCICSIAVGMIAEIIVMYPIQDRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFEKGVDKEHVLLLAARASRTENQDAIDAAVVGTLAD PKEARAGVREVHFLPFNPVDKRTALTYIDSQGNWHRASKGAPEQIMTLCNLREDTKKKVHAMIDKFAERGLRSLAVSRQE VPEKTKESAGGPWQFVGLLSLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSTLLGQDKDA SIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPG LSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAVLNDGTIMTISKDRVKPSPLPDSW KLNEIFATGVVLGSYLALMTVIFFWAMHETHFFPDKFGVRHLTHDEMMSALYLQVSIVSQALIFVTRSRGWSFVERPGLL LVVAFIIAQLIATIIAVYADWGFAKVKGIGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNMLENKTAFTTKKDY GKEEREAQWALAQRTLHGLQPPETSGIFNEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQH YTV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 863 | 863 | 0.0 | – | |
| TIGRFAM | 1 | 738 | 738 | 0.0 | ||
| Phobius | 1 | 11 | 11 | - | – | |
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| SUPERFAMILY | 1 | 779 | 779 | 6.54E-73 | ||
| CDD | 1 | 773 | 773 | 0.0 | ||
| Phobius | 1 | 22 | 22 | - | – | |
| Gene3D | 1 | 92 | 92 | 2.8E-30 | – | |
| PANTHER | 1 | 863 | 863 | 0.0 | – | |
| Phobius | 12 | 17 | 6 | - | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| Phobius | 23 | 31 | 9 | - | – | |
| Phobius | 32 | 48 | 17 | - | – | |
| TIGRFAM | 35 | 282 | 248 | 1.1E-37 | ||
| Phobius | 49 | 174 | 126 | - | – | |
| Pfam | 65 | 242 | 178 | 3.4E-48 | – | |
| SUPERFAMILY | 66 | 163 | 98 | 7.85E-29 | ||
| PRINTS | 113 | 127 | 15 | 4.1E-42 | – | |
| Gene3D | 129 | 276 | 148 | 4.0E-15 | – | |
| Phobius | 175 | 201 | 27 | - | – | |
| TMHMM | 176 | 198 | 23 | - | – | |
| Phobius | 202 | 212 | 11 | - | – | |
| TMHMM | 213 | 235 | 23 | - | – | |
| Phobius | 213 | 235 | 23 | - | – | |
| Phobius | 236 | 580 | 345 | - | – | |
| SFLD | 245 | 574 | 330 | 0.0 | – | |
| SFLD | 245 | 574 | 330 | 0.0 | – | |
| Pfam | 259 | 536 | 278 | 4.0E-18 | – | |
| SUPERFAMILY | 259 | 569 | 311 | 4.5E-40 | ||
| PRINTS | 263 | 277 | 15 | 4.1E-42 | – | |
| ProSitePatterns | 265 | 271 | 7 | - | ||
| Gene3D | 277 | 418 | 142 | 2.8E-47 | ||
| PRINTS | 379 | 397 | 19 | 2.9E-59 | ||
| PRINTS | 417 | 428 | 12 | 4.1E-42 | – | |
| Gene3D | 419 | 485 | 67 | 8.6E-6 | ||
| PRINTS | 439 | 449 | 11 | 4.1E-42 | – | |
| PRINTS | 494 | 510 | 17 | 2.9E-59 | ||
| TIGRFAM | 497 | 611 | 115 | 3.0E-28 | ||
| Gene3D | 500 | 778 | 279 | 4.6E-111 | – | |
| PRINTS | 522 | 541 | 20 | 4.1E-42 | – | |
| PRINTS | 522 | 538 | 17 | 2.9E-59 | ||
| PRINTS | 545 | 557 | 13 | 4.1E-42 | – | |
| PRINTS | 553 | 578 | 26 | 2.9E-59 | ||
| TMHMM | 581 | 603 | 23 | - | – | |
| Phobius | 581 | 603 | 23 | - | – | |
| Phobius | 604 | 608 | 5 | - | – | |
| TMHMM | 607 | 624 | 18 | - | – | |
| Phobius | 609 | 626 | 18 | - | – | |
| Phobius | 627 | 645 | 19 | - | – | |
| TMHMM | 645 | 667 | 23 | - | – | |
| Phobius | 646 | 667 | 22 | - | – | |
| Phobius | 668 | 686 | 19 | - | – | |
| Phobius | 687 | 706 | 20 | - | – | |
| TMHMM | 687 | 705 | 19 | - | – | |
| PRINTS | 692 | 713 | 22 | 2.9E-59 | ||
| Phobius | 707 | 717 | 11 | - | – | |
| TMHMM | 717 | 739 | 23 | - | – | |
| Phobius | 718 | 739 | 22 | - | – | |
| Phobius | 740 | 750 | 11 | - | – | |
| TMHMM | 749 | 768 | 20 | - | – | |
| Phobius | 751 | 768 | 18 | - | – | |
| Phobius | 769 | 883 | 115 | - | – | |
| Coils | 834 | 854 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Proton-exporting ATPase activity, phosphorylative mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Proton export across plasma membrane | The directed movement of hydrogen ions (protons) from inside a cell, across the plasma membrane and into the extracellular region. |
Expression pattern of LotjaGi4g1v0302900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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