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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR016169
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We have found 71 results. Now displaying 2 of 2 with 50 rows per page. This search has taken 6.350s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi3g1v0054600.1
n.a. L-gulonolactone oxidase; TAIR: AT5G11540.1 D-arabinono-1,4-lactone oxidase family protein; Swiss-Prot: sp|Q9LYD8|GGLO3_ARATH L-gulonolactone oxidase 3; TrEMBL-Plants: tr|A0A0S3RMW2|A0A0S3RMW2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0054600 LjG1.1_chr3 5705130 5708366 +
2 domain predictions
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LotjaGi3g1v0117100.1
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT3G63440.1 cytokinin oxidase/dehydrogenase 6; Swiss-Prot: sp|Q9LY71|CKX6_ARATH Cytokinin dehydrogenase 6; TrEMBL-Plants: tr|A0A0U2VEG5|A0A0U2VEG5_LOTJA Cytokinin oxidase/dehydrogenase 8; Found in the gene: LotjaGi3g1v0117100 LjG1.1_chr3 14351358 14356165 +
2 domain predictions
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LotjaGi3g1v0401900.1
n.a. L-gulonolactone oxidase; TAIR: AT2G46760.1 D-arabinono-1,4-lactone oxidase family protein; Swiss-Prot: sp|O81032|GGLO6_ARATH Probable L-gulonolactone oxidase 6; TrEMBL-Plants: tr|I1MKE1|I1MKE1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0401900 LjG1.1_chr3 80442555 80449338 -
2 domain predictions
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LotjaGi3g1v0525900.1
n.a. Delta(24)-sterol reductase; TAIR: AT3G19820.1 cell elongation protein / DWARF1 / DIMINUTO (DIM); Swiss-Prot: sp|P93472|DIM_PEA Delta(24)-sterol reductase; TrEMBL-Plants: tr|I1LPL0|I1LPL0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0525900 LjG1.1_chr3 94258697 94260998 +
2 domain predictions
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LotjaGi3g1v0546100.1
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT3G63440.1 cytokinin oxidase/dehydrogenase 6; Swiss-Prot: sp|Q9LY71|CKX6_ARATH Cytokinin dehydrogenase 6; TrEMBL-Plants: tr|A0A0U2T9H6|A0A0U2T9H6_LOTJA Cytokinin oxidase/dehydrogenase 6; Found in the gene: LotjaGi3g1v0546100 LjG1.1_chr3 96232473 96236973 +
2 domain predictions
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LotjaGi4g1v0309700.1
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT5G56970.1 cytokinin oxidase 3; Swiss-Prot: sp|Q5Z620|CKX10_ORYSJ Cytokinin dehydrogenase 10; TrEMBL-Plants: tr|A0A0U2V489|A0A0U2V489_LOTJA Cytokinin oxidase/dehydrogenase 2; Found in the gene: LotjaGi4g1v0309700 LjG1.1_chr4 68577416 68583233 +
2 domain predictions
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LotjaGi4g1v0309700.2
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT5G56970.1 cytokinin oxidase 3; Swiss-Prot: sp|Q5Z620|CKX10_ORYSJ Cytokinin dehydrogenase 10; TrEMBL-Plants: tr|A0A0U2V489|A0A0U2V489_LOTJA Cytokinin oxidase/dehydrogenase 2; Found in the gene: LotjaGi4g1v0309700 LjG1.1_chr4 68577416 68583233 +
2 domain predictions
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LotjaGi4g1v0309700.3
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT5G56970.1 cytokinin oxidase 3; Swiss-Prot: sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3; TrEMBL-Plants: tr|A0A0U2V489|A0A0U2V489_LOTJA Cytokinin oxidase/dehydrogenase 2; Found in the gene: LotjaGi4g1v0309700 LjG1.1_chr4 68577566 68583197 +
2 domain predictions
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LotjaGi4g1v0309900.1
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT5G56970.1 cytokinin oxidase 3; Swiss-Prot: sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3; TrEMBL-Plants: tr|I3T7E3|I3T7E3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0309900 LjG1.1_chr4 68607197 68610920 +
2 domain predictions
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LotjaGi4g1v0310100.1
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT5G56970.1 cytokinin oxidase 3; Swiss-Prot: sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3; TrEMBL-Plants: tr|H7BRI4|H7BRI4_SOYBN Cytokinin dehydrogenase 3; Found in the gene: LotjaGi4g1v0310100 LjG1.1_chr4 68634904 68641234 -
2 domain predictions
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LotjaGi5g1v0046100.1
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT5G21482.1 cytokinin oxidase 7; Swiss-Prot: sp|Q9FUJ1|CKX7_ARATH Cytokinin dehydrogenase 7; TrEMBL-Plants: tr|A0A0U2T7D7|A0A0U2T7D7_LOTJA Cytokinin oxidase/dehydrogenase 7; Found in the gene: LotjaGi5g1v0046100 LjG1.1_chr5 7770197 7777705 -
2 domain predictions
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LotjaGi5g1v0133000.1
n.a. L-galactono-1,4-lactone dehydrogenase; TAIR: AT3G47930.1 L-galactono-1,4-lactone dehydrogenase; Swiss-Prot: sp|Q9SU56|GLDH_ARATH L-galactono-1,4-lactone dehydrogenase, mitochondrial; TrEMBL-Plants: tr|Q0ZHB8|Q0ZHB8_LOTJA Mitochondrial L-galactono-1,4-lactone dehydrogenase; Found in the gene: LotjaGi5g1v0133000 LjG1.1_chr5 31163725 31178449 -
2 domain predictions
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LotjaGi5g1v0133000.2
n.a. L-galactono-1,4-lactone dehydrogenase; TAIR: AT3G47930.1 L-galactono-1,4-lactone dehydrogenase; Swiss-Prot: sp|Q9SU56|GLDH_ARATH L-galactono-1,4-lactone dehydrogenase, mitochondrial; TrEMBL-Plants: tr|Q0ZHB8|Q0ZHB8_LOTJA Mitochondrial L-galactono-1,4-lactone dehydrogenase; Found in the gene: LotjaGi5g1v0133000 LjG1.1_chr5 31164740 31178376 -
2 domain predictions
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LotjaGi5g1v0133000.3
n.a. L-galactono-1,4-lactone dehydrogenase; TAIR: AT3G47930.1 L-galactono-1,4-lactone dehydrogenase; Swiss-Prot: sp|Q9SU56|GLDH_ARATH L-galactono-1,4-lactone dehydrogenase, mitochondrial; TrEMBL-Plants: tr|Q0ZHB8|Q0ZHB8_LOTJA Mitochondrial L-galactono-1,4-lactone dehydrogenase; Found in the gene: LotjaGi5g1v0133000 LjG1.1_chr5 31164740 31178376 -
2 domain predictions
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LotjaGi6g1v0148300.1
n.a. DUF21 domain-containing protein; TAIR: AT1G55930.1 CBS domain-containing protein / transporter associated domain-containing protein; Swiss-Prot: sp|Q84R21|Y1559_ARATH DUF21 domain-containing protein At1g55930, chloroplastic; TrEMBL-Plants: tr|I1M6I6|I1M6I6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0148300 LjG1.1_chr6 42345209 42356261 +
2 domain predictions
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LotjaGi6g1v0148300.2
n.a. DUF21 domain-containing protein; TAIR: AT1G55930.1 CBS domain-containing protein / transporter associated domain-containing protein; Swiss-Prot: sp|Q84R21|Y1559_ARATH DUF21 domain-containing protein At1g55930, chloroplastic; TrEMBL-Plants: tr|K7KBK9|K7KBK9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0148300 LjG1.1_chr6 42345381 42356251 +
2 domain predictions
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LotjaGi6g1v0148700_LC.1
n.a. DUF21 domain-containing protein; TAIR: AT1G55930.1 CBS domain-containing protein / transporter associated domain-containing protein; Swiss-Prot: sp|Q84R21|Y1559_ARATH DUF21 domain-containing protein At1g55930, chloroplastic; TrEMBL-Plants: tr|I1M6I6|I1M6I6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0148700_LC LjG1.1_chr6 42381989 42384372 +
2 domain predictions
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LotjaGi6g1v0231200.1
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT5G56970.1 cytokinin oxidase 3; Swiss-Prot: sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3; TrEMBL-Plants: tr|A0A0U2V8L5|A0A0U2V8L5_LOTJA Cytokinin oxidase/dehydrogenase 3; Found in the gene: LotjaGi6g1v0231200 LjG1.1_chr6 53987588 53992563 -
2 domain predictions
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LotjaGi6g1v0231200.2
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT5G56970.1 cytokinin oxidase 3; Swiss-Prot: sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3; TrEMBL-Plants: tr|A0A0U2V8L5|A0A0U2V8L5_LOTJA Cytokinin oxidase/dehydrogenase 3; Found in the gene: LotjaGi6g1v0231200 LjG1.1_chr6 53987841 53991936 -
2 domain predictions
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LotjaGi6g1v0231300.1
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT5G56970.1 cytokinin oxidase 3; Swiss-Prot: sp|Q5Z620|CKX10_ORYSJ Cytokinin dehydrogenase 10; TrEMBL-Plants: tr|A0A0U2UQP8|A0A0U2UQP8_LOTJA Cytokinin oxidase/dehydrogenase 4; Found in the gene: LotjaGi6g1v0231300 LjG1.1_chr6 54003397 54007681 -
2 domain predictions
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LotjaGi6g1v0231300.2
n.a. Cytokinin oxidase/dehydrogenase-like protein; TAIR: AT5G56970.1 cytokinin oxidase 3; Swiss-Prot: sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3; TrEMBL-Plants: tr|A0A0U2UQP8|A0A0U2UQP8_LOTJA Cytokinin oxidase/dehydrogenase 4; Found in the gene: LotjaGi6g1v0231300 LjG1.1_chr6 54003397 54007681 -
2 domain predictions
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