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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR016181
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We have found 151 results. Now displaying 2 of 4 with 50 rows per page. This search has taken 5.639s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v1214930.1
n.a. PHD finger family protein [Arabidopsis lyrata subsp]. lyrata] gi|297801176|ref|XP_002868472.1| chr4 18056489 18057371 -
3 domain predictions
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Lj4g3v2023770.1
n.a. Acyl-CoA N-acyltransferases (NAT) superfamily protein isoform 1 [Theobroma cacao] gi|508784353|gb|EOY31609.1| chr4 28168344 28171951 -
3 domain predictions
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Lj5g3v0681130.1
n.a. Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|357510879|ref|XP_003625728.1| chr5 10034680 10039704 -
3 domain predictions
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Lj5g3v0681130.2
n.a. Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|357510879|ref|XP_003625728.1| chr5 10034680 10043347 -
3 domain predictions
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Lj5g3v1813840.1
n.a. Acyl-CoA N-acyltransferases superfamily protein isoform 1 [Theobroma cacao] gi|508726760|gb|EOY18657.1| chr5 26011539 26014710 -
3 domain predictions
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Lj6g3v1187480.1
n.a. acyl-CoA N-acyltransferases-like protein [Arabidopsis thaliana] gi|30678254|ref|NP_671784.2| chr6 14592379 14594472 +
3 domain predictions
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Lj6g3v1187480.2
n.a. acyl-CoA N-acyltransferases-like protein [Arabidopsis thaliana] gi|30678254|ref|NP_671784.2| chr6 14592379 14594472 +
3 domain predictions
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Lj6g3v1226280.1
n.a. PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like isoform 1 [Glycine max] gi|356556304|ref|XP_003546466.1| chr6 15239898 15241716 -
3 domain predictions
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LotjaGi1g1v0013200.1
n.a. Glucosamine 6-phosphate N-acetyltransferase; TAIR: AT5G15770.1 glucose-6-phosphate acetyltransferase 1; Swiss-Prot: sp|Q9LFU9|GNA1_ARATH Glucosamine 6-phosphate N-acetyltransferase; TrEMBL-Plants: tr|G7KQU8|G7KQU8_MEDTR Glucosamine 6-phosphate N-acetyltransferase; Found in the gene: LotjaGi1g1v0013200 LjG1.1_chr1 1690890 1696689 -
2 domain predictions
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LotjaGi1g1v0086700.1
n.a. Histone acetyltransferase; TAIR: AT5G56740.1 histone acetyltransferase of the GNAT family 2; Swiss-Prot: sp|Q9FJT8|HATB_ARATH Histone acetyltransferase type B catalytic subunit; TrEMBL-Plants: tr|I1M828|I1M828_SOYBN Histone acetyltransferase; Found in the gene: LotjaGi1g1v0086700 LjG1.1_chr1 12529865 12534055 +
2 domain predictions
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LotjaGi1g1v0116600.1
n.a. Acyl-CoA N-acyltransferases superfamily protein; TAIR: AT2G30090.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|O64815|HLS1L_ARATH Probable N-acetyltransferase HLS1-like; TrEMBL-Plants: tr|A0A151RYB8|A0A151RYB8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0116600 LjG1.1_chr1 18349094 18351161 +
2 domain predictions
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LotjaGi1g1v0118400_LC.1
n.a. RING/FYVE/PHD zinc finger protein; TAIR: AT5G58610.4 PHD finger transcription factor; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|G7JZJ8|G7JZJ8_MEDTR PHD zinc finger protein; Found in the gene: LotjaGi1g1v0118400_LC LjG1.1_chr1 18696963 18703992 -
2 domain predictions
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LotjaGi1g1v0172200.1
n.a. N-acetyltransferase, putative; TAIR: AT5G11340.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|Q0IIJ0|NAA50_BOVIN N-alpha-acetyltransferase 50; TrEMBL-Plants: tr|A0A0L9UV05|A0A0L9UV05_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0172200 LjG1.1_chr1 32796042 32803861 +
2 domain predictions
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LotjaGi1g1v0172200.2
n.a. N-alpha-acetyltransferase 50; TAIR: AT5G11340.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|Q0IIJ0|NAA50_BOVIN N-alpha-acetyltransferase 50; TrEMBL-Plants: tr|A0A0L9UV05|A0A0L9UV05_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0172200 LjG1.1_chr1 32798341 32803152 +
2 domain predictions
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LotjaGi1g1v0172200.3
n.a. N-acetyltransferase, putative; TAIR: AT5G11340.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|Q0IIJ0|NAA50_BOVIN N-alpha-acetyltransferase 50; TrEMBL-Plants: tr|A0A0L9UV05|A0A0L9UV05_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0172200 LjG1.1_chr1 32798341 32803152 +
2 domain predictions
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LotjaGi1g1v0235100.1
n.a. Elongator complex protein 3; TAIR: AT5G50320.1 radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein; Swiss-Prot: sp|Q93ZR1|ELP3_ARATH Elongator complex protein 3; TrEMBL-Plants: tr|A0A151R7U7|A0A151R7U7_CAJCA Elongator complex protein 3; Found in the gene: LotjaGi1g1v0235100 LjG1.1_chr1 55491555 55497461 -
2 domain predictions
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LotjaGi1g1v0263000.1
n.a. Acyl-CoA N-acyltransferases (NAT) superfamily protein; TAIR: AT1G21770.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|Q9CAQ2|Y1754_ARATH Acetyltransferase At1g77540; TrEMBL-Plants: tr|A0A1J7GC32|A0A1J7GC32_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0263000 LjG1.1_chr1 64439171 64441243 -
2 domain predictions
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LotjaGi1g1v0303700.2
n.a. N-acetyltransferase, putative; TAIR: AT4G19985.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|P51192|YCF52_PORPU Uncharacterized N-acetyltransferase ycf52; TrEMBL-Plants: tr|G7J9R3|G7J9R3_MEDTR Acetyltransferase (GNAT) domain protein; Found in the gene: LotjaGi1g1v0303700 LjG1.1_chr1 74132432 74136258 +
2 domain predictions
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LotjaGi1g1v0459300.1
n.a. Acetyltransferase; TAIR: AT1G32070.3 nuclear shuttle interacting; Swiss-Prot: sp|Q7X9V3|NSI_ARATH Acetyltransferase NSI; TrEMBL-Plants: tr|A0A0B2R5A3|A0A0B2R5A3_GLYSO Acetyltransferase NSI; Found in the gene: LotjaGi1g1v0459300 LjG1.1_chr1 96270166 96275385 +
2 domain predictions
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LotjaGi1g1v0633300.1
n.a. N-acetyltransferase-like protein; TAIR: AT2G38130.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|O80438|MAK3_ARATH N-alpha-acetyltransferase MAK3; TrEMBL-Plants: tr|I3SP11|I3SP11_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0633300 LjG1.1_chr1 118742300 118746548 -
2 domain predictions
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LotjaGi1g1v0668900.1
n.a. PAX-interacting protein 1; TAIR: AT2G41450.1 N-acetyltransferase; Swiss-Prot: sp|Q6ZW49|PAXI1_HUMAN PAX-interacting protein 1; TrEMBL-Plants: tr|K7KER9|K7KER9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0668900 LjG1.1_chr1 123160486 123172893 +
2 domain predictions
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LotjaGi1g1v0683900.1
n.a. RING/FYVE/PHD zinc finger protein; TAIR: AT2G36720.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|K7MZ48|K7MZ48_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0683900 LjG1.1_chr1 125085573 125094704 +
2 domain predictions
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LotjaGi1g1v0714400.1
n.a. Histone acetyltransferase GCN5; TAIR: AT3G54610.1 histone acetyltransferase of the GNAT family 1; Swiss-Prot: sp|Q9AR19|GCN5_ARATH Histone acetyltransferase GCN5; TrEMBL-Plants: tr|I1JNY5|I1JNY5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0714400 LjG1.1_chr1 128249343 128257382 -
2 domain predictions
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LotjaGi1g1v0714400.2
n.a. Histone acetyltransferase GCN5; TAIR: AT3G54610.1 histone acetyltransferase of the GNAT family 1; Swiss-Prot: sp|Q9AR19|GCN5_ARATH Histone acetyltransferase GCN5; TrEMBL-Plants: tr|I1JNY5|I1JNY5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0714400 LjG1.1_chr1 128249547 128257382 -
2 domain predictions
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LotjaGi1g1v0714400.3
n.a. Histone acetyltransferase GCN5; TAIR: AT3G54610.1 histone acetyltransferase of the GNAT family 1; Swiss-Prot: sp|Q9AR19|GCN5_ARATH Histone acetyltransferase GCN5; TrEMBL-Plants: tr|I1JNY5|I1JNY5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0714400 LjG1.1_chr1 128249866 128257313 -
2 domain predictions
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LotjaGi1g1v0736600.1
n.a. N-acetyltransferase ESCO2-like protein; TAIR: AT4G31400.1 protein CTF7; Swiss-Prot: sp|A7UL74|CTF7_ARATH Protein CHROMOSOME TRANSMISSION FIDELITY 7; TrEMBL-Plants: tr|A0A1J7H5Z1|A0A1J7H5Z1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0736600 LjG1.1_chr1 131074839 131077176 -
2 domain predictions
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LotjaGi1g1v0741000.1
n.a. Glucosamine 6-phosphate N-acetyltransferase; TAIR: AT5G15770.1 glucose-6-phosphate acetyltransferase 1; Swiss-Prot: sp|Q9LFU9|GNA1_ARATH Glucosamine 6-phosphate N-acetyltransferase; TrEMBL-Plants: tr|G7KQU8|G7KQU8_MEDTR Glucosamine 6-phosphate N-acetyltransferase; Found in the gene: LotjaGi1g1v0741000 LjG1.1_chr1 131488285 131492332 -
2 domain predictions
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LotjaGi1g1v0741000.2
n.a. Glucosamine 6-phosphate N-acetyltransferase; TAIR: AT5G15770.1 glucose-6-phosphate acetyltransferase 1; Swiss-Prot: sp|Q9LFU9|GNA1_ARATH Glucosamine 6-phosphate N-acetyltransferase; TrEMBL-Plants: tr|G7KQU8|G7KQU8_MEDTR Glucosamine 6-phosphate N-acetyltransferase; Found in the gene: LotjaGi1g1v0741000 LjG1.1_chr1 131489297 131489758 -
2 domain predictions
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LotjaGi1g1v0777900.1
n.a. N-acetyltransferase, putative; TAIR: AT3G22560.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|P05332|YP20_BACLI Uncharacterized N-acetyltransferase p20; TrEMBL-Plants: tr|I3SX79|I3SX79_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0777900 LjG1.1_chr1 135001427 135007433 +
2 domain predictions
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LotjaGi1g1v0777900.2
n.a. N-acetyltransferase, putative; TAIR: AT3G22560.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|P05332|YP20_BACLI Uncharacterized N-acetyltransferase p20; TrEMBL-Plants: tr|I3SX79|I3SX79_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0777900 LjG1.1_chr1 135002724 135005991 +
2 domain predictions
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LotjaGi1g1v0777900.3
n.a. N-acetyltransferase, putative; TAIR: AT3G22560.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|P05332|YP20_BACLI Uncharacterized N-acetyltransferase p20; TrEMBL-Plants: tr|I3SX79|I3SX79_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0777900 LjG1.1_chr1 135002757 135003290 +
2 domain predictions
 –
LotjaGi2g1v0098700.1
n.a. N-acetyltransferase, putative; TAIR: AT2G39000.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|Q03503|NAA30_YEAST N-alpha-acetyltransferase 30; TrEMBL-Plants: tr|I3SHA2|I3SHA2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0098700 LjG1.1_chr2 32388884 32419073 -
2 domain predictions
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LotjaGi2g1v0317600.1
n.a. N-acetyltransferase, putative; TAIR: AT1G24040.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|Q976C3|Y258_SULTO Uncharacterized N-acetyltransferase STK_02580; TrEMBL-Plants: tr|A0A1J7GY87|A0A1J7GY87_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0317600 LjG1.1_chr2 79254877 79262354 +
2 domain predictions
 –
LotjaGi2g1v0317600.2
n.a. N-acetyltransferase, putative; TAIR: AT1G24040.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|Q976C3|Y258_SULTO Uncharacterized N-acetyltransferase STK_02580; TrEMBL-Plants: tr|A0A1J7GY87|A0A1J7GY87_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0317600 LjG1.1_chr2 79254887 79262364 +
2 domain predictions
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LotjaGi2g1v0317600.3
n.a. N-acetyltransferase, putative; TAIR: AT1G24040.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|Q976C3|Y258_SULTO Uncharacterized N-acetyltransferase STK_02580; TrEMBL-Plants: tr|A0A1J7GY87|A0A1J7GY87_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0317600 LjG1.1_chr2 79254891 79258454 +
2 domain predictions
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LotjaGi2g1v0407900.1
n.a. N-acetyltransferase, putative; TAIR: AT2G23060.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|O64815|HLS1L_ARATH Probable N-acetyltransferase HLS1-like; TrEMBL-Plants: tr|V7CHH6|V7CHH6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0407900 LjG1.1_chr2 90509210 90511211 +
2 domain predictions
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LotjaGi2g1v0407900.2
n.a. Acyl-CoA N-acyltransferases (NAT) superfamily protein; TAIR: AT2G23060.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|O64815|HLS1L_ARATH Probable N-acetyltransferase HLS1-like; TrEMBL-Plants: tr|A0A0L9UQG7|A0A0L9UQG7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0407900 LjG1.1_chr2 90509289 90511172 +
2 domain predictions
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LotjaGi2g1v0410400.1
n.a. Acetylglutamate kinase; TAIR: AT4G37670.2 N-acetyl-l-glutamate synthase 2; Swiss-Prot: sp|B5X4Z4|NAGS2_ARATH Probable amino-acid acetyltransferase NAGS2, chloroplastic; TrEMBL-Plants: tr|I1J9F4|I1J9F4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0410400 LjG1.1_chr2 90726355 90735164 -
2 domain predictions
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LotjaGi2g1v0410400.2
n.a. Acetylglutamate kinase; TAIR: AT4G37670.2 N-acetyl-l-glutamate synthase 2; Swiss-Prot: sp|B5X4Z4|NAGS2_ARATH Probable amino-acid acetyltransferase NAGS2, chloroplastic; TrEMBL-Plants: tr|I1J9F5|I1J9F5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0410400 LjG1.1_chr2 90726456 90731663 -
2 domain predictions
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LotjaGi2g1v0450800.1
n.a. N-acetyltransferase, putative; TAIR: AT5G16800.2 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|Q9M8T9|MCC1_ARATH Histone acetyltransferase MCC1; TrEMBL-Plants: tr|I3SMR7|I3SMR7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0450800 LjG1.1_chr2 94404973 94407848 +
2 domain predictions
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LotjaGi2g1v0450800.2
n.a. N-acetyltransferase, putative; TAIR: AT5G16800.2 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|Q9M8T9|MCC1_ARATH Histone acetyltransferase MCC1; TrEMBL-Plants: tr|I3SMR7|I3SMR7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0450800 LjG1.1_chr2 94405016 94407869 +
2 domain predictions
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LotjaGi2g1v0450800.3
n.a. N-acetyltransferase, putative; TAIR: AT5G16800.2 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|Q9M8T9|MCC1_ARATH Histone acetyltransferase MCC1; TrEMBL-Plants: tr|I3SMR7|I3SMR7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0450800 LjG1.1_chr2 94405541 94407568 +
2 domain predictions
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LotjaGi3g1v0100200.1
n.a. Histone acetyltransferase; TAIR: AT5G09740.1 histone acetyltransferase of the MYST family 2; Swiss-Prot: sp|Q9FLF7|MYST1_ARATH Histone acetyltransferase of the MYST family 1; TrEMBL-Plants: tr|G7IVB8|G7IVB8_MEDTR Histone acetyltransferase; Found in the gene: LotjaGi3g1v0100200 LjG1.1_chr3 12452029 12459531 +
2 domain predictions
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LotjaGi3g1v0100200.2
n.a. Histone acetyltransferase; TAIR: AT5G09740.2 histone acetyltransferase of the MYST family 2; Swiss-Prot: sp|Q9FLF7|MYST1_ARATH Histone acetyltransferase of the MYST family 1; TrEMBL-Plants: tr|A0A176VBZ0|A0A176VBZ0_MARPO Histone acetyltransferase; Found in the gene: LotjaGi3g1v0100200 LjG1.1_chr3 12452140 12459011 +
2 domain predictions
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LotjaGi3g1v0118400.1
n.a. N-alpha-acetyltransferase; TAIR: AT5G13780.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|Q9BSU3|NAA11_HUMAN N-alpha-acetyltransferase 11; TrEMBL-Plants: tr|V7AJP6|V7AJP6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0118400 LjG1.1_chr3 14500021 14503156 +
2 domain predictions
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LotjaGi3g1v0118400.2
n.a. N-alpha-acetyltransferase; TAIR: AT5G13780.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|Q9BSU3|NAA11_HUMAN N-alpha-acetyltransferase 11; TrEMBL-Plants: tr|V7AJP6|V7AJP6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0118400 LjG1.1_chr3 14500295 14501520 +
2 domain predictions
 –
LotjaGi3g1v0118400.3
n.a. N-alpha-acetyltransferase; TAIR: AT5G13780.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|Q9BSU3|NAA11_HUMAN N-alpha-acetyltransferase 11; TrEMBL-Plants: tr|B7FJ76|B7FJ76_MEDTR Acyl-CoA N-acyltransferase (NAT) family protein; Found in the gene: LotjaGi3g1v0118400 LjG1.1_chr3 14500295 14501520 +
2 domain predictions
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LotjaGi3g1v0158900.1
n.a. Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; TAIR: AT3G14980.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|A0A072VAI1|A0A072VAI1_MEDTR RING/FYVE/PHD zinc finger protein; Found in the gene: LotjaGi3g1v0158900 LjG1.1_chr3 21698498 21708624 -
2 domain predictions
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LotjaGi3g1v0169800.1
n.a. RING/FYVE/PHD zinc finger protein; TAIR: AT2G27980.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|V7BYM1|V7BYM1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0169800 LjG1.1_chr3 23142618 23149886 -
2 domain predictions
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LotjaGi3g1v0349100.1
n.a. N-acetyltransferase, putative; TAIR: AT4G37580.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein; Swiss-Prot: sp|Q42381|HLS1_ARATH Probable N-acetyltransferase HLS1; TrEMBL-Plants: tr|A0A151SGE4|A0A151SGE4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0349100 LjG1.1_chr3 72692002 72697047 -
2 domain predictions
 –