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LotjaGi3g1v0100200.2

Overview

Field Value
Gene ID LotjaGi3g1v0100200
Transcript ID LotjaGi3g1v0100200.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Histone acetyltransferase; TAIR: AT5G09740.2 histone acetyltransferase of the MYST family 2; Swiss-Prot: sp|Q9FLF7|MYST1_ARATH Histone acetyltransferase of the MYST family 1; TrEMBL-Plants: tr|A0A176VBZ0|A0A176VBZ0_MARPO Histone acetyltransferase; Found in the gene: LotjaGi3g1v0100200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:12452140..12459011) extracted from Lotus japonicus Gifu genome v1.2.

ATAAAATCTTTACATCATCCATGGGTTCGCTCGACGCCCCGATCAGTGCGGAAAACGGCACCGCTCCTCCCACCGGCGCC GGAAAATCTCTTACAGCGGATGTCGGCGCACGCGTCCCGTCGTCAGAGGCGGCGGTGCCGGAGTTGGACACCTCGAAACG ACGAAGATCGTCTGTGCTCCCCCTGGAGGTTGGCACGCGCGTCATGTGCCGTTGGAGGGACTCGAAGTACCACCCTGTCA AAGTCATCGAACGCCGAAGAGTCCCTGGCTGTGGCCCCAACGATTACGAGTATTACGTCCATTATACTGAGTGTATGAAC CCTAACTTCTTAGTTCTTCAATTTCAATTTCAATTTCAATGAATGAATTTGTAATTAGGGTTTTGTGTTGTTGGATTTGT GAATTGCTTGGATTGTGATTTTATTGAGGGCTTGTTAGAATGAATGCCTATTGAATTCTATGGTATCTGTTTGTTGTTAT AGAGTAGGGTTTACTGTAGGGACACTAGTAATGTTAGTGCTGCTTGGTAAGAACTTGGATTGTTGTGAATCGTTGGTTGG TCGTTGATGTCGCGATTTAGAAAGTAAGGAATGAAATGAGGAAAGGAAGGATTATTGGGTGTTTATTTTCAAAATCAGCC AAGGGAAGCCATAGCTTCCTACCTGAGAAAAAACCAGCAACTAAACTGTAGGTGTTGTATGACTATGTAGTTCATATGTT CATTTTCCGCTTCATAGAGTTTCAAATCTTTGAATTTTGTTGTATGTATTTTGATATCTGGATAAACGATGTTAAGTTTG CCTTTTTTGTTTCAAACAAGATCATTGATATGTCAGTGTTATCAAATATCCGCCATGGCAGTTTCTCATGGCGGTTTTTT GGGTTTCCGCCATGGCCGATATCCCGCCATATGGCCGCAATATCCTGCCATATTCCGCCATTATTTGTCATGTATGGCAG GATTTCGGCTTTCCGCCATCCGCAATTAACAACACTGATAGGTCATCATGCTTCAGTTTTATAAATTTATGCTTCACATA TCATCATCGTTATGATTTTCTTTTTAACTGCTGCGGGGGATGAGGGGATAGAGTAGGGGGAGGGGGAACATGGAGATATA TTATGCTTTTTGACCTGAAATAGGTGTTGGTACTTGGTAGTGGCTGTGGTAAGTGATACTTTCCATGTTCTCAACAGTTA ATAGAATAAGATCAACTCCCATTTCTTCTTTCTTGGAGACTTTTAGAATGAATTTCTAGTTCCGTTATTGTTTTTTGTTT GTTCTATTCTTCATCATGTTGCCATTGTTTTTCTATTTGAACATTACTAACTCCTAATAGTTGATGTCAATGTTTTTGCA ACTATCTTTTTCTAGGTTTATCTGTTCACTTTAGGCAGGCATACTTAAACGCTACCTGCTTAGTCTTTTGTTTTCACACT TTTTGGTTTTGGCAGTCAATAGGAGGCTTGATGAGTGGGTGAAGCTTGATCAGCTTGATCTTGATTCCGTGGAGGCAGTT GTTGATGAGAAAGTGGAGGAGAAGGTAATAACTATAATAATATCTTCCCTCATCTGCTTAACCGGTTTTGTTTTTGGTCC TCATCTATTTCTTTTTTGAAAGATGGGTATGGAGGTCCCCTAACAAAGGGGCAACGTAGTGTGTGCTCCAGACTAATGTT TATTGTTCTACAACCACAACAACAATAGCCTTTTCTTAATAGTGGCTTCGTGGATAAGCGCTTCCCATGTTATGTTTTAA CCCGAGTTTCCAGAATATCTGTTTATTGTTCTAAGTATATTTTCTTTCCATCAGTAGTTTCTCTTTCTGGTGGTGGTAGA TAGGAAGATCTTTTATCTTAACAGCATGTAGTCATATGTTTTTTTAATGGCGCTAGACAGAAAGATCTTATATCCTAACA GCATGTAGTCATATGTTTTTGGTGGCCACATGTAGTCACTTGCGCTGGTCATTCTTCATTTAATATCACGAATGGTGCTT TCTCCATCATGTTTACCTCTTCAAAAGATGCACTCTATAATGCAACTCATCTAGAAAATTGCACATGTGGTTTCCCAGGG TGCAACAGGTTTGAAGATGACACGCCACCAAAAGAGGAAGATTGACGAAACACATGTAGAGGTATTGATTTGTTACTTTT CAATTATTACGTGGACATACACTGTTAACAATGATACTCAAAATAAATAACAATCTACTATATTTTACTCCTTGTCTCTA TCAGTCTGTAGCAGCATGATCAAAGCAACTGCTTTAATTTCTTGTCACCCTTAAAGCACATGCAAACAGTAAACCTTTTT GGATACCAGTTGCTTTGATCATGAGATTGAAGCCAAGTGAAACATATAATTATGATTCTATTTAGTTAGAGCGTCATTCT GTTAATTTCTTTCGTGTATGTGAAACCGGTGTGCTTTATAGAGTGGTCATATTATTCCTTATTTTAAATTTATTTATATA TTGTTAAATTATAGGGCCATGAGGAGCTTGATGCTGCTAGTTTGCGTGAACATGAAGAATTTACTAAAGTGAAAAATATA GCTACTATTGAACTTGGAAGATATGAGATTGAGACATGGTATTTCTCCCCATTCCCACCAGAATACAATGACTGTTTGAG GCTGTACTTCTGTGAGTTTTGTCTCAATTTCATGAAGCGCAAAGAACAGCTTCAGAGGCATATGGTGAGCTGGGCCTGAA ATAATATTTTTGCCGTTCATTTTGGAAAGTGTTTATTTTCTACTGTGCTATCCTTGTTTTAAGATGATCCATGATTGTAA ATCTGACATGTCTTTGGTATTTTGCTTACACTGCTCTTATTTTTTCTTCAGTCATGTCTTTAAGATGCTGCGGCTTTGTA AACTTAAGTTTGACTTTTTAATTATTTAATCTATTGTTTCTCTAATTTATTTGAAAATAAACCTTTTTGGTTGTAACAAA TTCATTATTTGCTTGAACATGTGGAAGTTGATAAAGGGTTACTGGATTACATATAGTGTATTCAATGCCTCTATTGGTAT TTTTCTCCCTCCCCCTGGGGTCTAAACAAATTGCTGAAGAAAGATGAAATCATTTTTTATGCTGAATTTATATTACTTGC ATTTGTATACCATTTTTTTGCCCGTTGTACCAACATTGGCTTCCTGTTCATGCAGAAAAAGTGTGATCTTAAGCATCCCC CTGGTGATGAGATATACAGAAGCGGTACACTGTCAATGTTTGAGGTACATTTTTAGCACTATTGTTTTTTTCATCATTAT TTTCTTGTTCTTTGTTGCCAGATGTCTCTCTCTCCTATTATGCTTAAATTTTAGAGTTTTAGATGAGTTTTCAAGTTCCT GTTTCACATATCTTTAAATTTTCATGTTCAATGAATGCCTGGTATAAAAAATTTTAAAAATACCTTAACTGTTACTTGTT TATCAATGCAAACAATGGACATCCTATATTTATTTTTAGCTCAGTTATAAAACTTACACTGCATGAATATCTTTATTTCT CCAACTGCCATGGCCGATATTCAGCCATCCACCATCAATGTTTGTCAAATATGGCCTGTTTTTTGCTTTCCGCCATCCGC CATTAACAACACTGATGCAAACACAATAATAATGTTATTGTATTTAATATGACAGCTCTAGAGTTCTCTTCTCATAGTAC TCAAATTTATGAAAAAGTAATTTATTGGCATGTCTTATAACCAAGGGTCCTATTATCCGGTCTTTCCCTGATGCAGCCAT GACAAAATTGCTGCCACATCAAAAGGCACTATTATTGGGTGCACAAAAACTCTCAGAACATGGCAATAATGTAATTTTGT GGCCGTAGTGTATGGGATAGGATTAGGGATGTTCATGGGATGGCTCGGGACAGGGTTTGCTTGTTCTTGACCCATCCCTA ATTTTTAACCGGGCCAATTTTTTAGACCGTAACTTGTCTATAGATCCAAATGAACCCCATGCCTTATTAGTCAAATTACG ACCAGGTTTAAGGAGGACAAGAGACCATGTTGACTCAAAGTAAAGGCTAAATAAAATTATGAAATGATATAGAAATTTAA AAATTTCCTTTTACCATTCATTGGTGTTTCAAGAGAGTTTCCCATTTCTGACATGTACAGAGATTGTGCTGCCTTACTGC TTTGCTGGTCCCTCCCCCCCCCCCCCCCCTTTTTGCTCTTTGTTTTCTTTGCTTTGCAGGATTTATTATCCTCCTTAGGT TCTAATAGAATTTATTTTCGAAAGCCTTGCTCAATTACCCGCCCCAACTATTGCTAAATGAGCCTAACATCTAAATGTTA ATTTCTTTTAATTCTTATATTGCATCTTATTAAAATAACATAACGAAGTTTAGGGTATGCTTAGCTACAAAATTCTGATA CTTGAAATATTTCTATTTATAAATTTTTATAGTATAGTGAATTAGTGATAACTGAGTTTTTACTTTGACAACTCTGCGAT ATCTGGCAGGGAGTTGAAAGTCACAACATAATGTGTGAGTGAGTGAGAGTTTGAATTTTGTCATTGTTTGTAATTATTGT CATTATTACATGTCTGAAAACAGGTTGATGGCAAAAAGAACAAGGTCTATGGGCAGAATCTTTGTTATTTGGCCAAGTTA TTTCTTGATCACAAGACCCTCTATTATGATGTTGATCTGTTTCTGTTCTATGTTTTATGTGAATGTGACGATCGAGGATG CCACATGGTTGGCTATTTTTCCAAGGTAACATTATTGGGTTTTCATCATGACATCATTTTGGTTAGATGTAAGATATTTT AAATTTTTAATATTTTACATCTAGCAAGCCCATTTACTATATGTTTGTCTTTCCTAAGAGGACTCAATAAACTTCCTTTA AAGGAGCAGAACCATTTATCATGTGATTTCTTTATATTATATTTATTTATTTATGAGCTTCTACTTGGAGGAGCTAAGTT TATCATGTTCATACACAGACCTGATTTAGATCTTATTGTTATTTGTAATATGAAAAACAACTTTATCCAAATTTGGATAT CTTCAATCTCCATTCTTTTACTTCTCATTGTAATTATTTACTCAGATTTGCTTTGCATTATGGATGCCCTTATTGATATT GATTACTTTTTAATTGCAAAGGAAAAACATTCTGAAGAGTCTTACAATTTGGCATGTATTCTCACCCTTCCACCTTACCA AAGAAAAGGCTATGGCAAATTTCTTATCGCTTTTTGTAAGCTCTCTCTCCCCTTCTCTCTCTCTCTCACACACACAGAAA GCAGGCCTCTTTGTAGAGTTATATATGATATAGTGCCAAAGTTCATAATCATTTCAAACATTGAACAGCATATGAACTTT CCAAGAAGGAGGGAAAAGTTGGCACACCTGAAAGACCTCTTTCAGACCTTGGACTGCTTAGCTACAGAGGATATTGGACC AGAGTTCTGTTAGACATTCTGAAAAAGCACAAGGGAAACATTTCGATCAAAGTAAGTGTCTTCTTTATGTCTCTTTTAAA TTCTAAAGCAATGATGAATTAAACTTTCTCTGTTTACAATTAAAGTTCATTTGATTATTTGGAATTTGATGAACTTACTT TTATGTGGATGATGATTATTGCTAAGATTTTAATTATGGGGATGTAGTTCAATGCATGTATGTATATGGGGGGATTCCAT TACTCTGAGTAATTCTTGCCAAAGCTATTCCTTTTTAATATCATTTTATAGAATATGATTGAATAAATTCAACTGGTAAA TTGCAATTCTTATTAAGTAGATCAAGTATACCAAAATTCATAAAATTTTAGGACAGATTGCGTAAGAGGAATTGGGCCTA CATAGCAAAAGATGAATGGGGCATGGATTGGAACCAGAGTGTGGAAAGTGTATACGAGGAAGAAGAGAAGTGGGCCAGCT ACTCGTTAGTTCTTATGACTGAGTTGTTAGTGTAAGGTGGGGAGTGAATTGCGGTGAGGCAGGTTTTAGCATGTTGCTGT GGGTTGGTATCAGTCAGTCAGTTTTTGGTATGAGGCTGAGAGGGAGATACTGTTTTCTCTGAAGGAGCTCTTGCTCTGGT GTTATTTCCCTTGCTATAATATAGCCCTTGGAGTTATGAGTATTGTCAGATTGGTTTCCTAACATGGGTCCGATGGGATT TGGGTAGTCCATTCTGCTTTGCTGCTCATGCAGGCAAGGTGTCAGATGGAGTCAAAGCCTTGGAGGCCAAAATTGCCATG CGCTCCGTTTAATCATCTATGGTGGAGTTTCGGCAAGCTACGCCTTGAAGAGTGGTAATCTTCTTCTGTTGGTGACAGTA TGGCTGTGCACTACGAGTACTATATGGCCAACTCCTCTCCATTATATACTCTTTCCCCACTTTGTGCCTTCTATAGTACC TATTTGATCCATAGGATTTTTTCCCAGATAAAATAAAATCTTTTGAAGCATGTTATGGTTTCTTATGACCATCGTTTCTC ATATCCAGGTTATATAAGTTGTTTTTTAATGAAAACAAATACCAAATGAATATGTACTGTCTGTAAATAATACTAGAAAT AAATCAAAAAATTGTAACAAGCTGATTCTGTTGACTTGGTGATTAATTGGTTGCTCATGTATTCTCTGTCTCAAAGTTAT AGCCATTGAAAAAGCTGTTTTTTGGCAGGAGCTTAGTGATATGACTGCCATTAAAGCTGAAGATATATTGACCACTCTTC AGAGCCTGGAATTGATTCAGTACAGGAAGGGACAGCATGTTATTTGCGCAGATCCAAAAGTTCTGGACCGCCATCTCAAA GCTGCTGGCAGAGGAGGTCTGGATGTTGATGTTAGCAAATTGATCTGGACTCCTTATAAGGAACAAAGTTGA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0100200.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGTTCGCTCGACGCCCCGATCAGTGCGGAAAACGGCACCGCTCCTCCCACCGGCGCCGGAAAATCTCTTACAGCGGA TGTCGGCGCACGCGTCCCGTCGTCAGAGGCGGCGGTGCCGGAGTTGGACACCTCGAAACGACGAAGATCGTCTGTGCTCC CCCTGGAGGTTGGCACGCGCGTCATGTGCCGTTGGAGGGACTCGAAGTACCACCCTGTCAAAGTCATCGAACGCCGAAGA GTCCCTGGCTGTGGCCCCAACGATTACGAGTATTACGTCCATTATACTGAGTTCAATAGGAGGCTTGATGAGTGGGTGAA GCTTGATCAGCTTGATCTTGATTCCGTGGAGGCAGTTGTTGATGAGAAAGTGGAGGAGAAGGGTGCAACAGGTTTGAAGA TGACACGCCACCAAAAGAGGAAGATTGACGAAACACATGTAGAGGGCCATGAGGAGCTTGATGCTGCTAGTTTGCGTGAA CATGAAGAATTTACTAAAGTTGATGGCAAAAAGAACAAGGTCTATGGGCAGAATCTTTGTTATTTGGCCAAGTTATTTCT TGATCACAAGACCCTCTATTATGATGTTGATCTGTTTCTGTTCTATGTTTTATGTGAATGTGACGATCGAGGATGCCACA TGGTTGGCTATTTTTCCAAGGAAAAACATTCTGAAGAGTCTTACAATTTGGCATGTATTCTCACCCTTCCACCTTACCAA AGAAAAGGCTATGGCAAATTTCTTATCGCTTTTTCATATGAACTTTCCAAGAAGGAGGGAAAAGTTGGCACACCTGAAAG ACCTCTTTCAGACCTTGGACTGCTTAGCTACAGAGGATATTGGACCAGAGTTCTGTTAGACATTCTGAAAAAGCACAAGG GAAACATTTCGATCAAAGAGCTTAGTGATATGACTGCCATTAAAGCTGAAGATATATTGACCACTCTTCAGAGCCTGGAA TTGATTCAGTACAGGAAGGGACAGCATGTTATTTGCGCAGATCCAAAAGTTCTGGACCGCCATCTCAAAGCTGCTGGCAG AGGAGGTCTGGATGTTGATGTTAGCAAATTGATCTGGACTCCTTATAAGGAACAAAGTTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0100200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGSLDAPISAENGTAPPTGAGKSLTADVGARVPSSEAAVPELDTSKRRRSSVLPLEVGTRVMCRWRDSKYHPVKVIERRR VPGCGPNDYEYYVHYTEFNRRLDEWVKLDQLDLDSVEAVVDEKVEEKGATGLKMTRHQKRKIDETHVEGHEELDAASLRE HEEFTKVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQ RKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLE LIQYRKGQHVICADPKVLDRHLKAAGRGGLDVDVSKLIWTPYKEQS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 49 49 - –
PANTHER
PTHR10615:SF181
10 167 158 2.6E-209 –
PANTHER
PTHR10615
10 167 158 2.6E-209 –
Gene3D
G3DSA:2.30.30.140
45 161 117 8.4E-26 –
ProSiteProfiles
PS51726
47 361 315 55.182
IPR002717
SUPERFAMILY
SSF54160
49 166 118 1.19E-23
IPR016197
Pfam
PF11717
55 113 59 1.5E-20
IPR025995
CDD
cd18642
58 127 70 4.26476E-24 –
SMART
SM00298
69 128 60 1.6E-6
IPR000953
SUPERFAMILY
SSF55729
135 362 228 4.58E-83
IPR016181
Pfam
PF01853
163 328 166 1.3E-77
IPR002717
Gene3D
G3DSA:3.40.630.30
163 361 199 5.3E-86 –
PANTHER
PTHR10615
167 366 200 2.6E-209 –
PANTHER
PTHR10615:SF181
167 366 200 2.6E-209 –
CDD
cd04301
202 260 59 0.00186184 –
Gene3D
G3DSA:1.10.10.10
269 349 81 5.3E-86
IPR036388

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004402
Molecular function Histone acetyltransferase activity Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone.
Subterm of
GO:0006355
Biological process Regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
Subterm of
Regulates
GO:0016573
Biological process Histone acetylation The modification of a histone by the addition of an acetyl group.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0100200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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