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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0100200 |
| Transcript ID | LotjaGi3g1v0100200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histone acetyltransferase; TAIR: AT5G09740.1 histone acetyltransferase of the MYST family 2; Swiss-Prot: sp|Q9FLF7|MYST1_ARATH Histone acetyltransferase of the MYST family 1; TrEMBL-Plants: tr|G7IVB8|G7IVB8_MEDTR Histone acetyltransferase; Found in the gene: LotjaGi3g1v0100200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12452029..12459531) extracted from Lotus japonicus Gifu genome v1.2.
ATTCACTTGAAAAGAATAAAATCCAACATTAAACCAAACCTTTTATTCTAGGGCACACCCACCATACATGACCATGGACA TCTAATCTCAAAATTCCCAAATCACCGAAAAATAAAATCTTTACATCATCCATGGGTTCGCTCGACGCCCCGATCAGTGC GGAAAACGGCACCGCTCCTCCCACCGGCGCCGGAAAATCTCTTACAGCGGATGTCGGCGCACGCGTCCCGTCGTCAGAGG CGGCGGTGCCGGAGTTGGACACCTCGAAACGACGAAGATCGTCTGTGCTCCCCCTGGAGGTTGGCACGCGCGTCATGTGC CGTTGGAGGGACTCGAAGTACCACCCTGTCAAAGTCATCGAACGCCGAAGAGTCCCTGGCTGTGGCCCCAACGATTACGA GTATTACGTCCATTATACTGAGTGTATGAACCCTAACTTCTTAGTTCTTCAATTTCAATTTCAATTTCAATGAATGAATT TGTAATTAGGGTTTTGTGTTGTTGGATTTGTGAATTGCTTGGATTGTGATTTTATTGAGGGCTTGTTAGAATGAATGCCT ATTGAATTCTATGGTATCTGTTTGTTGTTATAGAGTAGGGTTTACTGTAGGGACACTAGTAATGTTAGTGCTGCTTGGTA AGAACTTGGATTGTTGTGAATCGTTGGTTGGTCGTTGATGTCGCGATTTAGAAAGTAAGGAATGAAATGAGGAAAGGAAG GATTATTGGGTGTTTATTTTCAAAATCAGCCAAGGGAAGCCATAGCTTCCTACCTGAGAAAAAACCAGCAACTAAACTGT AGGTGTTGTATGACTATGTAGTTCATATGTTCATTTTCCGCTTCATAGAGTTTCAAATCTTTGAATTTTGTTGTATGTAT TTTGATATCTGGATAAACGATGTTAAGTTTGCCTTTTTTGTTTCAAACAAGATCATTGATATGTCAGTGTTATCAAATAT CCGCCATGGCAGTTTCTCATGGCGGTTTTTTGGGTTTCCGCCATGGCCGATATCCCGCCATATGGCCGCAATATCCTGCC ATATTCCGCCATTATTTGTCATGTATGGCAGGATTTCGGCTTTCCGCCATCCGCAATTAACAACACTGATAGGTCATCAT GCTTCAGTTTTATAAATTTATGCTTCACATATCATCATCGTTATGATTTTCTTTTTAACTGCTGCGGGGGATGAGGGGAT AGAGTAGGGGGAGGGGGAACATGGAGATATATTATGCTTTTTGACCTGAAATAGGTGTTGGTACTTGGTAGTGGCTGTGG TAAGTGATACTTTCCATGTTCTCAACAGTTAATAGAATAAGATCAACTCCCATTTCTTCTTTCTTGGAGACTTTTAGAAT GAATTTCTAGTTCCGTTATTGTTTTTTGTTTGTTCTATTCTTCATCATGTTGCCATTGTTTTTCTATTTGAACATTACTA ACTCCTAATAGTTGATGTCAATGTTTTTGCAACTATCTTTTTCTAGGTTTATCTGTTCACTTTAGGCAGGCATACTTAAA CGCTACCTGCTTAGTCTTTTGTTTTCACACTTTTTGGTTTTGGCAGTCAATAGGAGGCTTGATGAGTGGGTGAAGCTTGA TCAGCTTGATCTTGATTCCGTGGAGGCAGTTGTTGATGAGAAAGTGGAGGAGAAGGTAATAACTATAATAATATCTTCCC TCATCTGCTTAACCGGTTTTGTTTTTGGTCCTCATCTATTTCTTTTTTGAAAGATGGGTATGGAGGTCCCCTAACAAAGG GGCAACGTAGTGTGTGCTCCAGACTAATGTTTATTGTTCTACAACCACAACAACAATAGCCTTTTCTTAATAGTGGCTTC GTGGATAAGCGCTTCCCATGTTATGTTTTAACCCGAGTTTCCAGAATATCTGTTTATTGTTCTAAGTATATTTTCTTTCC ATCAGTAGTTTCTCTTTCTGGTGGTGGTAGATAGGAAGATCTTTTATCTTAACAGCATGTAGTCATATGTTTTTTTAATG GCGCTAGACAGAAAGATCTTATATCCTAACAGCATGTAGTCATATGTTTTTGGTGGCCACATGTAGTCACTTGCGCTGGT CATTCTTCATTTAATATCACGAATGGTGCTTTCTCCATCATGTTTACCTCTTCAAAAGATGCACTCTATAATGCAACTCA TCTAGAAAATTGCACATGTGGTTTCCCAGGGTGCAACAGGTTTGAAGATGACACGCCACCAAAAGAGGAAGATTGACGAA ACACATGTAGAGGTATTGATTTGTTACTTTTCAATTATTACGTGGACATACACTGTTAACAATGATACTCAAAATAAATA ACAATCTACTATATTTTACTCCTTGTCTCTATCAGTCTGTAGCAGCATGATCAAAGCAACTGCTTTAATTTCTTGTCACC CTTAAAGCACATGCAAACAGTAAACCTTTTTGGATACCAGTTGCTTTGATCATGAGATTGAAGCCAAGTGAAACATATAA TTATGATTCTATTTAGTTAGAGCGTCATTCTGTTAATTTCTTTCGTGTATGTGAAACCGGTGTGCTTTATAGAGTGGTCA TATTATTCCTTATTTTAAATTTATTTATATATTGTTAAATTATAGGGCCATGAGGAGCTTGATGCTGCTAGTTTGCGTGA ACATGAAGAATTTACTAAAGTGAAAAATATAGCTACTATTGAACTTGGAAGATATGAGATTGAGACATGGTATTTCTCCC CATTCCCACCAGAATACAATGACTGTTTGAGGCTGTACTTCTGTGAGTTTTGTCTCAATTTCATGAAGCGCAAAGAACAG CTTCAGAGGCATATGGTGAGCTGGGCCTGAAATAATATTTTTGCCGTTCATTTTGGAAAGTGTTTATTTTCTACTGTGCT ATCCTTGTTTTAAGATGATCCATGATTGTAAATCTGACATGTCTTTGGTATTTTGCTTACACTGCTCTTATTTTTTCTTC AGTCATGTCTTTAAGATGCTGCGGCTTTGTAAACTTAAGTTTGACTTTTTAATTATTTAATCTATTGTTTCTCTAATTTA TTTGAAAATAAACCTTTTTGGTTGTAACAAATTCATTATTTGCTTGAACATGTGGAAGTTGATAAAGGGTTACTGGATTA CATATAGTGTATTCAATGCCTCTATTGGTATTTTTCTCCCTCCCCCTGGGGTCTAAACAAATTGCTGAAGAAAGATGAAA TCATTTTTTATGCTGAATTTATATTACTTGCATTTGTATACCATTTTTTTGCCCGTTGTACCAACATTGGCTTCCTGTTC ATGCAGAAAAAGTGTGATCTTAAGCATCCCCCTGGTGATGAGATATACAGAAGCGGTACACTGTCAATGTTTGAGGTACA TTTTTAGCACTATTGTTTTTTTCATCATTATTTTCTTGTTCTTTGTTGCCAGATGTCTCTCTCTCCTATTATGCTTAAAT TTTAGAGTTTTAGATGAGTTTTCAAGTTCCTGTTTCACATATCTTTAAATTTTCATGTTCAATGAATGCCTGGTATAAAA AATTTTAAAAATACCTTAACTGTTACTTGTTTATCAATGCAAACAATGGACATCCTATATTTATTTTTAGCTCAGTTATA AAACTTACACTGCATGAATATCTTTATTTCTCCAACTGCCATGGCCGATATTCAGCCATCCACCATCAATGTTTGTCAAA TATGGCCTGTTTTTTGCTTTCCGCCATCCGCCATTAACAACACTGATGCAAACACAATAATAATGTTATTGTATTTAATA TGACAGCTCTAGAGTTCTCTTCTCATAGTACTCAAATTTATGAAAAAGTAATTTATTGGCATGTCTTATAACCAAGGGTC CTATTATCCGGTCTTTCCCTGATGCAGCCATGACAAAATTGCTGCCACATCAAAAGGCACTATTATTGGGTGCACAAAAA CTCTCAGAACATGGCAATAATGTAATTTTGTGGCCGTAGTGTATGGGATAGGATTAGGGATGTTCATGGGATGGCTCGGG ACAGGGTTTGCTTGTTCTTGACCCATCCCTAATTTTTAACCGGGCCAATTTTTTAGACCGTAACTTGTCTATAGATCCAA ATGAACCCCATGCCTTATTAGTCAAATTACGACCAGGTTTAAGGAGGACAAGAGACCATGTTGACTCAAAGTAAAGGCTA AATAAAATTATGAAATGATATAGAAATTTAAAAATTTCCTTTTACCATTCATTGGTGTTTCAAGAGAGTTTCCCATTTCT GACATGTACAGAGATTGTGCTGCCTTACTGCTTTGCTGGTCCCTCCCCCCCCCCCCCCCCTTTTTGCTCTTTGTTTTCTT TGCTTTGCAGGATTTATTATCCTCCTTAGGTTCTAATAGAATTTATTTTCGAAAGCCTTGCTCAATTACCCGCCCCAACT ATTGCTAAATGAGCCTAACATCTAAATGTTAATTTCTTTTAATTCTTATATTGCATCTTATTAAAATAACATAACGAAGT TTAGGGTATGCTTAGCTACAAAATTCTGATACTTGAAATATTTCTATTTATAAATTTTTATAGTATAGTGAATTAGTGAT AACTGAGTTTTTACTTTGACAACTCTGCGATATCTGGCAGGGAGTTGAAAGTCACAACATAATGTGTGAGTGAGTGAGAG TTTGAATTTTGTCATTGTTTGTAATTATTGTCATTATTACATGTCTGAAAACAGGTTGATGGCAAAAAGAACAAGGTCTA TGGGCAGAATCTTTGTTATTTGGCCAAGTTATTTCTTGATCACAAGACCCTCTATTATGATGTTGATCTGTTTCTGTTCT ATGTTTTATGTGAATGTGACGATCGAGGATGCCACATGGTTGGCTATTTTTCCAAGGTAACATTATTGGGTTTTCATCAT GACATCATTTTGGTTAGATGTAAGATATTTTAAATTTTTAATATTTTACATCTAGCAAGCCCATTTACTATATGTTTGTC TTTCCTAAGAGGACTCAATAAACTTCCTTTAAAGGAGCAGAACCATTTATCATGTGATTTCTTTATATTATATTTATTTA TTTATGAGCTTCTACTTGGAGGAGCTAAGTTTATCATGTTCATACACAGACCTGATTTAGATCTTATTGTTATTTGTAAT ATGAAAAACAACTTTATCCAAATTTGGATATCTTCAATCTCCATTCTTTTACTTCTCATTGTAATTATTTACTCAGATTT GCTTTGCATTATGGATGCCCTTATTGATATTGATTACTTTTTAATTGCAAAGGAAAAACATTCTGAAGAGTCTTACAATT TGGCATGTATTCTCACCCTTCCACCTTACCAAAGAAAAGGCTATGGCAAATTTCTTATCGCTTTTTGTAAGCTCTCTCTC CCCTTCTCTCTCTCTCTCACACACACAGAAAGCAGGCCTCTTTGTAGAGTTATATATGATATAGTGCCAAAGTTCATAAT CATTTCAAACATTGAACAGCATATGAACTTTCCAAGAAGGAGGGAAAAGTTGGCACACCTGAAAGACCTCTTTCAGACCT TGGACTGCTTAGCTACAGAGGATATTGGACCAGAGTTCTGTTAGACATTCTGAAAAAGCACAAGGGAAACATTTCGATCA AAGTAAGTGTCTTCTTTATGTCTCTTTTAAATTCTAAAGCAATGATGAATTAAACTTTCTCTGTTTACAATTAAAGTTCA TTTGATTATTTGGAATTTGATGAACTTACTTTTATGTGGATGATGATTATTGCTAAGATTTTAATTATGGGGATGTAGTT CAATGCATGTATGTATATGGGGGGATTCCATTACTCTGAGTAATTCTTGCCAAAGCTATTCCTTTTTAATATCATTTTAT AGAATATGATTGAATAAATTCAACTGGTAAATTGCAATTCTTATTAAGTAGATCAAGTATACCAAAATTCATAAAATTTT AGGACAGATTGCGTAAGAGGAATTGGGCCTACATAGCAAAAGATGAATGGGGCATGGATTGGAACCAGAGTGTGGAAAGT GTATACGAGGAAGAAGAGAAGTGGGCCAGCTACTCGTTAGTTCTTATGACTGAGTTGTTAGTGTAAGGTGGGGAGTGAAT TGCGGTGAGGCAGGTTTTAGCATGTTGCTGTGGGTTGGTATCAGTCAGTCAGTTTTTGGTATGAGGCTGAGAGGGAGATA CTGTTTTCTCTGAAGGAGCTCTTGCTCTGGTGTTATTTCCCTTGCTATAATATAGCCCTTGGAGTTATGAGTATTGTCAG ATTGGTTTCCTAACATGGGTCCGATGGGATTTGGGTAGTCCATTCTGCTTTGCTGCTCATGCAGGCAAGGTGTCAGATGG AGTCAAAGCCTTGGAGGCCAAAATTGCCATGCGCTCCGTTTAATCATCTATGGTGGAGTTTCGGCAAGCTACGCCTTGAA GAGTGGTAATCTTCTTCTGTTGGTGACAGTATGGCTGTGCACTACGAGTACTATATGGCCAACTCCTCTCCATTATATAC TCTTTCCCCACTTTGTGCCTTCTATAGTACCTATTTGATCCATAGGATTTTTTCCCAGATAAAATAAAATCTTTTGAAGC ATGTTATGGTTTCTTATGACCATCGTTTCTCATATCCAGGTTATATAAGTTGTTTTTTAATGAAAACAAATACCAAATGA ATATGTACTGTCTGTAAATAATACTAGAAATAAATCAAAAAATTGTAACAAGCTGATTCTGTTGACTTGGTGATTAATTG GTTGCTCATGTATTCTCTGTCTCAAAGTTATAGCCATTGAAAAAGCTGTTTTTTGGCAGGAGCTTAGTGATATGACTGCC ATTAAAGCTGAAGATATATTGACCACTCTTCAGAGCCTGGAATTGATTCAGTACAGGAAGGGACAGCATGTTATTTGCGC AGATCCAAAAGTTCTGGACCGCCATCTCAAAGCTGCTGGCAGAGGAGGTCTGGATGTTGATGTTAGCAAATTGATCTGGA CTCCTTATAAGGAACAAAGTTGATTGCCGCACTCATCAAAGAAATACTGTGATGTTCTTGTGTATAGAGCGTAGGCTAGG TTTCTTAGTTGGTAACATGGCCCCTTTGATGTATTATGGAGATCAGAATAGGATATAACTGATTGATTTATGTACTTAGC CTTTCATTTCTAATGATGACTGGCAGAGGAATTGTTTTATTTTTTATCTTAATGCATGCATATTCCTAGCTTTTTGATGT TTGACATTAATTTTTTTATTAAAGTATACAAATTGTTAATATTAAACATGTTCTCTAACTGAGAATCTATTGAGCTTAAA GGGTGGATTTTGTATAAGTTTACGTACTTTGTGGTTATTTTCAACTTATAAAGATGTTTAATTGTATTTTCAGCTCCTTG ATTATATTTAATGTGTGGTTTTGGGCATTTAAGATTTTTTTGTATGAATTTAATTCCTCATTTTTTAAATGTCACAATTT AAGATCATTCATCAACCCCCTTCAGTCTTCAATTTAAAGCCCTAAAATTTTGTTGTTTTATTG
CDS sequence (LotjaGi3g1v0100200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTCGCTCGACGCCCCGATCAGTGCGGAAAACGGCACCGCTCCTCCCACCGGCGCCGGAAAATCTCTTACAGCGGA TGTCGGCGCACGCGTCCCGTCGTCAGAGGCGGCGGTGCCGGAGTTGGACACCTCGAAACGACGAAGATCGTCTGTGCTCC CCCTGGAGGTTGGCACGCGCGTCATGTGCCGTTGGAGGGACTCGAAGTACCACCCTGTCAAAGTCATCGAACGCCGAAGA GTCCCTGGCTGTGGCCCCAACGATTACGAGTATTACGTCCATTATACTGAGTTCAATAGGAGGCTTGATGAGTGGGTGAA GCTTGATCAGCTTGATCTTGATTCCGTGGAGGCAGTTGTTGATGAGAAAGTGGAGGAGAAGGGTGCAACAGGTTTGAAGA TGACACGCCACCAAAAGAGGAAGATTGACGAAACACATGTAGAGGGCCATGAGGAGCTTGATGCTGCTAGTTTGCGTGAA CATGAAGAATTTACTAAAGTGAAAAATATAGCTACTATTGAACTTGGAAGATATGAGATTGAGACATGGTATTTCTCCCC ATTCCCACCAGAATACAATGACTGTTTGAGGCTGTACTTCTGTGAGTTTTGTCTCAATTTCATGAAGCGCAAAGAACAGC TTCAGAGGCATATGAAAAAGTGTGATCTTAAGCATCCCCCTGGTGATGAGATATACAGAAGCGGTACACTGTCAATGTTT GAGGTTGATGGCAAAAAGAACAAGGTCTATGGGCAGAATCTTTGTTATTTGGCCAAGTTATTTCTTGATCACAAGACCCT CTATTATGATGTTGATCTGTTTCTGTTCTATGTTTTATGTGAATGTGACGATCGAGGATGCCACATGGTTGGCTATTTTT CCAAGGAAAAACATTCTGAAGAGTCTTACAATTTGGCATGTATTCTCACCCTTCCACCTTACCAAAGAAAAGGCTATGGC AAATTTCTTATCGCTTTTTCATATGAACTTTCCAAGAAGGAGGGAAAAGTTGGCACACCTGAAAGACCTCTTTCAGACCT TGGACTGCTTAGCTACAGAGGATATTGGACCAGAGTTCTGTTAGACATTCTGAAAAAGCACAAGGGAAACATTTCGATCA AAGAGCTTAGTGATATGACTGCCATTAAAGCTGAAGATATATTGACCACTCTTCAGAGCCTGGAATTGATTCAGTACAGG AAGGGACAGCATGTTATTTGCGCAGATCCAAAAGTTCTGGACCGCCATCTCAAAGCTGCTGGCAGAGGAGGTCTGGATGT TGATGTTAGCAAATTGATCTGGACTCCTTATAAGGAACAAAGTTGA
Protein sequence (LotjaGi3g1v0100200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSLDAPISAENGTAPPTGAGKSLTADVGARVPSSEAAVPELDTSKRRRSSVLPLEVGTRVMCRWRDSKYHPVKVIERRR VPGCGPNDYEYYVHYTEFNRRLDEWVKLDQLDLDSVEAVVDEKVEEKGATGLKMTRHQKRKIDETHVEGHEELDAASLRE HEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCLRLYFCEFCLNFMKRKEQLQRHMKKCDLKHPPGDEIYRSGTLSMF EVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYG KFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYR KGQHVICADPKVLDRHLKAAGRGGLDVDVSKLIWTPYKEQS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 49 | 49 | - | – | |
| PANTHER | 10 | 441 | 432 | 2.6E-275 | – | |
| PANTHER | 10 | 441 | 432 | 2.6E-275 | – | |
| Gene3D | 45 | 165 | 121 | 1.2E-25 | – | |
| SUPERFAMILY | 49 | 166 | 118 | 1.74E-23 | ||
| Pfam | 55 | 113 | 59 | 1.9E-20 | ||
| CDD | 58 | 127 | 70 | 7.94033E-24 | – | |
| SMART | 69 | 128 | 60 | 1.6E-6 | ||
| ProSiteProfiles | 165 | 436 | 272 | 76.3 | ||
| SUPERFAMILY | 166 | 437 | 272 | 5.04E-111 | ||
| Gene3D | 166 | 222 | 57 | 1.6E-27 | – | |
| Pfam | 167 | 221 | 55 | 1.2E-24 | ||
| Gene3D | 225 | 436 | 212 | 1.3E-94 | – | |
| Pfam | 226 | 403 | 178 | 1.1E-84 | ||
| CDD | 277 | 335 | 59 | 0.00165288 | – | |
| Gene3D | 344 | 424 | 81 | 1.3E-94 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Histone acetyltransferase activity | Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Biological process | Histone acetylation | The modification of a histone by the addition of an acetyl group. |
Expression pattern of LotjaGi3g1v0100200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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