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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR026961
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 110 results. Now displaying 3 of 3 with 50 rows per page. This search has taken 5.797s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi6g1v0241700.1
n.a. Ankyrin repeat-containing protein; TAIR: AT3G18670.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q25338|LITD_LATTR Delta-latroinsectotoxin-Lt1a; TrEMBL-Plants: tr|A0A072V7U6|A0A072V7U6_MEDTR Ankyrin repeat plant-like protein; Found in the gene: LotjaGi6g1v0241700 LjG1.1_chr6 55341867 55346557 +
2 domain predictions
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LotjaGi6g1v0241700.2
n.a. Ankyrin repeat-containing protein; TAIR: AT3G18670.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q25338|LITD_LATTR Delta-latroinsectotoxin-Lt1a; TrEMBL-Plants: tr|A0A072V7U6|A0A072V7U6_MEDTR Ankyrin repeat plant-like protein; Found in the gene: LotjaGi6g1v0241700 LjG1.1_chr6 55341867 55346557 +
2 domain predictions
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LotjaGi6g1v0241700.3
n.a. Ankyrin repeat-containing protein; TAIR: AT3G18670.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q25338|LITD_LATTR Delta-latroinsectotoxin-Lt1a; TrEMBL-Plants: tr|A0A072V7U6|A0A072V7U6_MEDTR Ankyrin repeat plant-like protein; Found in the gene: LotjaGi6g1v0241700 LjG1.1_chr6 55341924 55346281 +
2 domain predictions
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LotjaGi6g1v0289300.1
n.a. Ankyrin repeat-containing protein family; TAIR: AT3G18670.2 Ankyrin repeat family protein; Swiss-Prot: sp|A2CIR5|NPR4_ORYSJ Ankyrin repeat-containing protein NPR4; TrEMBL-Plants: tr|A0A151T6S0|A0A151T6S0_CAJCA Ankyrin repeat-containing protein family; Found in the gene: LotjaGi6g1v0289300 LjG1.1_chr6 60650647 60657080 +
2 domain predictions
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LotjaGi6g1v0289300.2
n.a. Ankyrin repeat-containing protein family; TAIR: AT5G04690.2 Ankyrin repeat family protein; Swiss-Prot: sp|A2CIR5|NPR4_ORYSJ Ankyrin repeat-containing protein NPR4; TrEMBL-Plants: tr|A0A151T6S0|A0A151T6S0_CAJCA Ankyrin repeat-containing protein family; Found in the gene: LotjaGi6g1v0289300 LjG1.1_chr6 60656231 60656873 +
2 domain predictions
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LotjaGi6g1v0304600.1
n.a. Ankyrin repeat protein; TAIR: AT5G04700.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q9C7A2|ITN1_ARATH Ankyrin repeat-containing protein ITN1; TrEMBL-Plants: tr|G7IFK1|G7IFK1_MEDTR Ankyrin repeat protein; Found in the gene: LotjaGi6g1v0304600 LjG1.1_chr6 62188463 62198773 +
2 domain predictions
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LotjaGi6g1v0304600.2
n.a. Ankyrin repeat protein; TAIR: AT5G04700.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q9C7A2|ITN1_ARATH Ankyrin repeat-containing protein ITN1; TrEMBL-Plants: tr|G7IFK1|G7IFK1_MEDTR Ankyrin repeat protein; Found in the gene: LotjaGi6g1v0304600 LjG1.1_chr6 62189125 62192820 +
2 domain predictions
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LotjaGi6g1v0318100.1
n.a. Ankyrin repeat protein; TAIR: AT3G18670.2 Ankyrin repeat family protein; Swiss-Prot: sp|Q9C7A2|ITN1_ARATH Ankyrin repeat-containing protein ITN1; TrEMBL-Plants: tr|G7ILT7|G7ILT7_MEDTR Ankyrin repeat protein; Found in the gene: LotjaGi6g1v0318100 LjG1.1_chr6 63542727 63547018 -
2 domain predictions
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LotjaGi6g1v0318200.1
n.a. Ankyrin repeat-containing protein family; TAIR: AT3G18670.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q9C7A2|ITN1_ARATH Ankyrin repeat-containing protein ITN1; TrEMBL-Plants: tr|A0A0R0G953|A0A0R0G953_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0318200 LjG1.1_chr6 63550882 63552884 -
2 domain predictions
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LotjaGi6g1v0318500.1
n.a. Ankyrin repeat-containing protein family; TAIR: AT3G18670.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q9C7A2|ITN1_ARATH Ankyrin repeat-containing protein ITN1; TrEMBL-Plants: tr|K7MAD8|K7MAD8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0318500 LjG1.1_chr6 63561289 63562945 -
2 domain predictions
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