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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR029047
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 189 results. Now displaying 2 of 4 with 50 rows per page. This search has taken 6.844s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3718120.2
n.a. Heat shock protein [Medicago truncatula] gi|357503425|ref|XP_003622001.1| chr1 42889209 42893868 -
3 domain predictions
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Lj1g3v4550110.1
n.a. PREDICTED: probable mediator of RNA polymerase II transcription subunit 37c-like [Cicer arietinum] gi|502110465|ref|XP_004493886.1| chr1 53678592 53681524 -
3 domain predictions
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Lj1g3v4865370.1
n.a. Heat shock protein [Medicago truncatula] gi|357445271|ref|XP_003592913.1| chr1 59035358 59038312 -
3 domain predictions
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Lj1g3v4921040.1
n.a. Heat shock protein 70 (Hsp 70) family protein [Theobroma cacao] gi|508719590|gb|EOY11487.1| chr1 59808742 59811863 +
3 domain predictions
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Lj2g3v0915000.1
n.a. Heat shock protein [Medicago truncatula] gi|357503425|ref|XP_003622001.1| chr2 14406705 14412536 -
3 domain predictions
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Lj2g3v0915010.1
n.a. Heat shock protein [Medicago truncatula] gi|357503425|ref|XP_003622001.1| chr2 14406811 14412539 -
3 domain predictions
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Lj2g3v0915020.1
n.a. Heat shock protein [Medicago truncatula] gi|357503367|ref|XP_003621972.1| chr2 14413741 14414537 -
3 domain predictions
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Lj3g3v0150720.1
n.a. PREDICTED: 97 kDa heat shock protein-like [Glycine max] gi|356556102|ref|XP_003546366.1| chr3 1168498 1174104 -
3 domain predictions
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Lj3g3v2062810.1
n.a. Heat shock protein 70B [Theobroma cacao] gi|508778858|gb|EOY26114.1| chr3 26558172 26560400 -
3 domain predictions
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Lj3g3v2282430.1
n.a. PREDICTED: 97 kDa heat shock protein-like [Glycine max] gi|356522017|ref|XP_003529646.1| chr3 27922976 27929495 -
3 domain predictions
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Lj3g3v3188570.1
n.a. PREDICTED: heat shock cognate 70 kDa protein-like [Glycine max] gi|356539018|ref|XP_003537997.1| chr3 39337260 39339927 +
3 domain predictions
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Lj4g3v0119600.1
n.a. n.a. chr4 1054584 1063157 -
3 domain predictions
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Lj4g3v0119610.1
n.a. Heat shock protein [Medicago truncatula] gi|357503425|ref|XP_003622001.1| chr4 1057930 1062265 +
3 domain predictions
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Lj4g3v0451110.1
n.a. PREDICTED: heat shock cognate 70 kDa protein-like [Brachypodium distachyon] gi|357125805|ref|XP_003564580.1| chr4 6600797 6603160 -
3 domain predictions
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Lj4g3v2000880.1
n.a. PREDICTED: heat shock 70 kDa protein-like [Glycine max] gi|356562559|ref|XP_003549537.1| chr4 27799100 27801698 +
3 domain predictions
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Lj4g3v3014490.1
n.a. PREDICTED: luminal-binding protein-like [Cicer arietinum] gi|502138932|ref|XP_004503582.1| chr4 40093858 40097150 +
3 domain predictions
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Lj6g3v0204710.1
n.a. PREDICTED: hypoxia up-regulated protein 1-like [Glycine max] gi|356547531|ref|XP_003542165.1| chr6 2029524 2044734 +
2 domain predictions
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Lj6g3v0920460.1
n.a. PREDICTED: heat shock 70 kDa protein 16-like [Cicer arietinum] gi|502128712|ref|XP_004500055.1| chr6 9299070 9306525 +
3 domain predictions
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Lj6g3v1966850.1
n.a. Heat-shock protein [Medicago truncatula] gi|357447047|ref|XP_003593799.1| chr6 22672575 22674871 -
3 domain predictions
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Lj6g3v1966930.2
n.a. Heat-shock protein [Medicago truncatula] gi|357447047|ref|XP_003593799.1| chr6 22694744 22703012 +
3 domain predictions
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Lj6g3v1966940.2
n.a. n.a. chr6 22694826 22703544 -
3 domain predictions
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Lj6g3v2192100.1
n.a. PREDICTED: heat shock 70 kDa protein, mitochondrial-like [Glycine max] gi|356549495|ref|XP_003543129.1| chr6 25216372 25219526 -
3 domain predictions
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Lj6g3v2285300.1
n.a. PREDICTED: stromal 70 kDa heat shock-related protein, chloroplastic-like [Glycine max] gi|356559803|ref|XP_003548186.1| chr6 26856520 26858128 -
3 domain predictions
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LotjaGi1g1v0031300.3
n.a. Heat shock 70 kDa protein; TAIR: AT1G11660.1 heat shock protein 70 (Hsp 70) family protein; Swiss-Prot: sp|Q9SAB1|HSP7Q_ARATH Heat shock 70 kDa protein 16; TrEMBL-Plants: tr|A0A076L4U6|A0A076L4U6_CICAR Heat shock protein; Found in the gene: LotjaGi1g1v0031300 LjG1.1_chr1 4000802 4009774 -
3 domain predictions
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LotjaGi1g1v0031300.4
n.a. Heat shock 70 kDa protein; TAIR: AT1G11660.1 heat shock protein 70 (Hsp 70) family protein; Swiss-Prot: sp|Q9SAB1|HSP7Q_ARATH Heat shock 70 kDa protein 16; TrEMBL-Plants: tr|A0A076L4U6|A0A076L4U6_CICAR Heat shock protein; Found in the gene: LotjaGi1g1v0031300 LjG1.1_chr1 4005227 4009755 -
3 domain predictions
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LotjaGi1g1v0375100.1
n.a. 70-kDa heat shock protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|A0A151TME6|A0A151TME6_CAJCA Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi1g1v0375100 LjG1.1_chr1 85341329 85344012 +
3 domain predictions
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LotjaGi1g1v0375100.2
n.a. 70-kDa heat shock protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|A0A151TME6|A0A151TME6_CAJCA Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi1g1v0375100 LjG1.1_chr1 85341887 85344027 +
3 domain predictions
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LotjaGi1g1v0453900.1
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0453900 LjG1.1_chr1 95446723 95449308 +
3 domain predictions
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LotjaGi1g1v0461400_LC.1
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|A0A151SGK8|A0A151SGK8_CAJCA Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi1g1v0461400_LC LjG1.1_chr1 96557570 96558512 +
3 domain predictions
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LotjaGi1g1v0525900.1
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0525900 LjG1.1_chr1 105269248 105271938 -
3 domain predictions
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LotjaGi1g1v0525900.2
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0525900 LjG1.1_chr1 105269254 105271937 -
3 domain predictions
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LotjaGi1g1v0525900.3
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0525900 LjG1.1_chr1 105269265 105276724 -
3 domain predictions
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LotjaGi1g1v0526100.1
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0526100 LjG1.1_chr1 105295186 105297844 -
3 domain predictions
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LotjaGi1g1v0526100.2
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0526100 LjG1.1_chr1 105295203 105301794 -
3 domain predictions
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LotjaGi1g1v0527000_LC.1
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0527000_LC LjG1.1_chr1 105412209 105412680 -
2 domain predictions
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LotjaGi1g1v0527500.1
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A0|K7L2A0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0527500 LjG1.1_chr1 105435279 105438346 -
3 domain predictions
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LotjaGi1g1v0527900.1
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0527900 LjG1.1_chr1 105473502 105475777 +
3 domain predictions
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LotjaGi1g1v0528000.1
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0528000 LjG1.1_chr1 105476934 105479791 +
3 domain predictions
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LotjaGi1g1v0528100.1
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0528100 LjG1.1_chr1 105486619 105496837 +
3 domain predictions
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LotjaGi1g1v0528100.2
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0528100 LjG1.1_chr1 105486808 105497916 +
3 domain predictions
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LotjaGi1g1v0528100.3
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0528100 LjG1.1_chr1 105494387 105496837 +
3 domain predictions
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LotjaGi1g1v0528300.1
n.a. Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0528300 LjG1.1_chr1 105497975 105505286 +
3 domain predictions
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LotjaGi1g1v0530700_LC.2
n.a. 70 kDa heat shock protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2; TrEMBL-Plants: tr|A0A151TME6|A0A151TME6_CAJCA Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi1g1v0530700_LC LjG1.1_chr1 105780669 105785889 +
3 domain predictions
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LotjaGi1g1v0530900.1
n.a. 70 kDa heat shock protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2; TrEMBL-Plants: tr|A0A151TME6|A0A151TME6_CAJCA Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi1g1v0530900 LjG1.1_chr1 105795163 105801737 +
3 domain predictions
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LotjaGi1g1v0530900.2
n.a. 70 kDa heat shock protein; TAIR: AT5G02500.1 heat shock cognate protein 70-1; Swiss-Prot: sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2; TrEMBL-Plants: tr|D2D325|D2D325_GOSHI Heat shock protein 70; Found in the gene: LotjaGi1g1v0530900 LjG1.1_chr1 105795163 105801737 +
3 domain predictions
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LotjaGi1g1v0535700.1
n.a. 70 kDa heat shock protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|A0A0B2PXN5|A0A0B2PXN5_GLYSO Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi1g1v0535700 LjG1.1_chr1 106420362 106423712 +
3 domain predictions
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LotjaGi1g1v0535700.2
n.a. 70 kDa heat shock protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|A0A0B2PXN5|A0A0B2PXN5_GLYSO Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi1g1v0535700 LjG1.1_chr1 106420594 106424045 +
3 domain predictions
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LotjaGi1g1v0535800.1
n.a. 70-kDa heat shock protein; TAIR: AT5G02500.1 heat shock cognate protein 70-1; Swiss-Prot: sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2; TrEMBL-Plants: tr|G7KWU8|G7KWU8_MEDTR Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi1g1v0535800 LjG1.1_chr1 106453944 106458415 -
3 domain predictions
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LotjaGi1g1v0536600_LC.1
n.a. 70-kDa heat shock protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2; TrEMBL-Plants: tr|A0A151TME6|A0A151TME6_CAJCA Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi1g1v0536600_LC LjG1.1_chr1 106529604 106535501 -
3 domain predictions
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LotjaGi1g1v0536900_LC.1
n.a. 70 kDa heat shock protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K3Z4G6|K3Z4G6_SETIT Uncharacterized protein; Found in the gene: LotjaGi1g1v0536900_LC LjG1.1_chr1 106565493 106566340 -
3 domain predictions
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