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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • IPR036412
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We have found 375 results. Now displaying 8 of 8 with 50 rows per page. This search has taken 5.713s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi6g1v0219800.1
n.a. Haloacid dehalogenase-like hydrolase superfamily protein; TAIR: AT4G33140.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q97DU2|Y3379_CLOAB Nucleotidase CA_C3379; TrEMBL-Plants: tr|A0A151R368|A0A151R368_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0219800 LjG1.1_chr6 52308853 52312879 -
2 domain predictions
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LotjaGi6g1v0234000.1
n.a. Calcium-transporting ATPase; TAIR: AT5G57110.1 autoinhibited Ca2+ -ATPase, isoform 8; Swiss-Prot: sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type; TrEMBL-Plants: tr|A0A0R0G1Y0|A0A0R0G1Y0_SOYBN Calcium-transporting ATPase; Found in the gene: LotjaGi6g1v0234000 LjG1.1_chr6 54351686 54366952 -
2 domain predictions
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LotjaGi6g1v0234000.2
n.a. Calcium-transporting ATPase; TAIR: AT5G57110.1 autoinhibited Ca2+ -ATPase, isoform 8; Swiss-Prot: sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type; TrEMBL-Plants: tr|A0A0R0G1Y0|A0A0R0G1Y0_SOYBN Calcium-transporting ATPase; Found in the gene: LotjaGi6g1v0234000 LjG1.1_chr6 54352344 54371865 -
2 domain predictions
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LotjaGi6g1v0234000.3
n.a. Calcium-transporting ATPase; TAIR: AT5G57110.1 autoinhibited Ca2+ -ATPase, isoform 8; Swiss-Prot: sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type; TrEMBL-Plants: tr|A0A0R0G1Y0|A0A0R0G1Y0_SOYBN Calcium-transporting ATPase; Found in the gene: LotjaGi6g1v0234000 LjG1.1_chr6 54352647 54363902 -
2 domain predictions
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LotjaGi6g1v0240600.1
n.a. Plasma membrane ATPase; TAIR: AT2G24520.2 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|I1MGZ2|I1MGZ2_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55216846 55226511 -
2 domain predictions
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LotjaGi6g1v0240600.2
n.a. Plasma membrane ATPase; TAIR: AT2G24520.2 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|I1MGZ2|I1MGZ2_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55217692 55226486 -
2 domain predictions
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LotjaGi6g1v0240600.3
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|I1MGZ2|I1MGZ2_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218212 55222181 -
2 domain predictions
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LotjaGi6g1v0240600.4
n.a. Plasma membrane ATPase; TAIR: AT2G24520.2 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|G7JUD3|G7JUD3_MEDTR Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218212 55222743 -
2 domain predictions
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LotjaGi6g1v0240600.5
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|A0A0L9UAP3|A0A0L9UAP3_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218212 55223020 -
2 domain predictions
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LotjaGi6g1v0240600.6
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|A0A0L9UAP3|A0A0L9UAP3_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218212 55223059 -
2 domain predictions
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LotjaGi6g1v0240600.7
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|A0A0L9UAP3|A0A0L9UAP3_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218212 55223108 -
2 domain predictions
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LotjaGi6g1v0240600.8
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|A0A0L9UAP3|A0A0L9UAP3_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218212 55223111 -
2 domain predictions
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LotjaGi6g1v0240600.9
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|A0A0L9UAP3|A0A0L9UAP3_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218495 55223065 -
2 domain predictions
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LotjaGi6g1v0241300.1
n.a. Zinc-transporting ATPase; TAIR: AT4G30110.1 heavy metal atpase 2; Swiss-Prot: sp|Q9SZW4|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2; TrEMBL-Plants: tr|A0A151RDQ6|A0A151RDQ6_CAJCA Putative cadmium/zinc-transporting ATPase 3; Found in the gene: LotjaGi6g1v0241300 LjG1.1_chr6 55308881 55317500 -
2 domain predictions
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LotjaGi6g1v0243100.1
n.a. Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp|Q9S7J8|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr|A0A151T5L3|A0A151T5L3_CAJCA Copper-transporting ATPase RAN1; Found in the gene: LotjaGi6g1v0243100 LjG1.1_chr6 55562281 55569723 +
2 domain predictions
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LotjaGi6g1v0243100.2
n.a. Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp|Q9S7J8|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr|A0A151T5L3|A0A151T5L3_CAJCA Copper-transporting ATPase RAN1; Found in the gene: LotjaGi6g1v0243100 LjG1.1_chr6 55562413 55568201 +
2 domain predictions
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LotjaGi6g1v0243100.3
n.a. Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp|Q9S7J8|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr|A0A151T5L3|A0A151T5L3_CAJCA Copper-transporting ATPase RAN1; Found in the gene: LotjaGi6g1v0243100 LjG1.1_chr6 55562413 55568201 +
2 domain predictions
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LotjaGi6g1v0244600.1
n.a. Haloacid dehalogenase-like hydrolase domain-containing protein 3; TAIR: AT5G44730.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q5E9D6|HDHD3_BOVIN Haloacid dehalogenase-like hydrolase domain-containing protein 3; TrEMBL-Plants: tr|I3TAF4|I3TAF4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0244600 LjG1.1_chr6 55726332 55730292 +
2 domain predictions
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LotjaGi6g1v0244600.2
n.a. Haloacid dehalogenase-like hydrolase domain-containing protein 3; TAIR: AT5G44730.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q5E9D6|HDHD3_BOVIN Haloacid dehalogenase-like hydrolase domain-containing protein 3; TrEMBL-Plants: tr|I3TAF4|I3TAF4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0244600 LjG1.1_chr6 55728034 55729758 +
2 domain predictions
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LotjaGi6g1v0274700.1
n.a. Haloacid dehalogenase-like hydrolase domain-containing protein; TAIR: AT5G45170.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q94K71|GPPL2_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein At3g48420; TrEMBL-Plants: tr|A0A072V5X9|A0A072V5X9_MEDTR Haloacid dehalogenase-like hydrolase; Found in the gene: LotjaGi6g1v0274700 LjG1.1_chr6 59153733 59160487 +
2 domain predictions
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LotjaGi6g1v0274700.2
n.a. Haloacid dehalogenase-like hydrolase domain-containing protein; TAIR: AT5G45170.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q94K71|GPPL2_ARATH Haloacid dehalogenase-like hydrolase domain-containing protein At3g48420; TrEMBL-Plants: tr|A0A072V5X9|A0A072V5X9_MEDTR Haloacid dehalogenase-like hydrolase; Found in the gene: LotjaGi6g1v0274700 LjG1.1_chr6 59154374 59160125 +
2 domain predictions
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LotjaGi6g1v0281700_LC.1
n.a. Phosphoglycolate phosphatase; TAIR: AT5G47760.1 2-phosphoglycolate phosphatase 2; Swiss-Prot: sp|Q8GWU0|PGP2_ARATH Phosphoglycolate phosphatase 2; TrEMBL-Plants: tr|K7LBA1|K7LBA1_SOYBN Phosphoglycolate phosphatase; Found in the gene: LotjaGi6g1v0281700_LC LjG1.1_chr6 59805010 59807990 +
2 domain predictions
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LotjaGi6g1v0317800.1
n.a. CTD small phosphatase-like protein; TAIR: AT5G45700.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9PTJ6|CTDSL_CHICK CTD small phosphatase-like protein; TrEMBL-Plants: tr|K7M175|K7M175_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0317800 LjG1.1_chr6 63533309 63534587 +
2 domain predictions
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LotjaGi6g1v0349400.1
n.a. Magnesium-dependent phosphatase 1; TAIR: AT2G14110.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9D967|MGDP1_MOUSE Magnesium-dependent phosphatase 1; TrEMBL-Plants: tr|I3S090|I3S090_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0349400 LjG1.1_chr6 66189640 66195726 -
2 domain predictions
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LotjaGi6g1v0349400.2
n.a. Magnesium-dependent phosphatase 1; TAIR: AT2G14110.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9D967|MGDP1_MOUSE Magnesium-dependent phosphatase 1; TrEMBL-Plants: tr|I3S090|I3S090_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0349400 LjG1.1_chr6 66194085 66195463 -
2 domain predictions
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