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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0341190 |
| Transcript ID | Lj4g3v0341190.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] gi|356512046|ref|XP_003524732.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 14 | 14 | – | – | |
| Phobius | 15 | 32 | 18 | – | – | |
| PANTHER | 17 | 472 | 456 | 1.30E-269 | – | |
| TMHMM | 17 | 34 | 18 | – | – | |
| PANTHER | 17 | 472 | 456 | 1.30E-269 | ||
| Phobius | 33 | 601 | 569 | – | – | |
| SUPERFAMILY | 37 | 458 | 422 | 3.92E-73 | ||
| Gene3D | 59 | 458 | 400 | 1.90E-73 | ||
| Pfam | 68 | 455 | 388 | 3.70E-51 | ||
| Gene3D | 484 | 593 | 110 | 2.50E-34 | ||
| SUPERFAMILY | 486 | 596 | 111 | 6.72E-30 | ||
| ProSiteProfiles | 488 | 521 | 34 | 9.027 | ||
| ProSiteProfiles | 488 | 589 | 102 | 22.768 | ||
| SMART | 488 | 521 | 34 | 6.40E-05 | ||
| Pfam | 495 | 536 | 42 | 1.30E-08 | ||
| SMART | 522 | 555 | 34 | 5.90E-05 | ||
| ProSiteProfiles | 522 | 555 | 34 | 7.139 | ||
| SMART | 556 | 589 | 34 | 0.0017 | ||
| ProSiteProfiles | 556 | 589 | 34 | 10.03 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Amidase activity | Catalysis of the reaction: a monocarboxylic acid amide + H2O = a monocarboxylate + NH3. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v0341190.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0341190.1, powered by CORGI.
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