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| Field | Value |
|---|---|
| Gene ID | Lj4g3v3114860 |
| Transcript ID | Lj4g3v3114860.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: translocon at the outer membrane of chloroplasts 64-like isoform X1 [Cicer arietinum] gi|502138058|ref|XP_004503273.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| Phobius | 6 | 23 | 18 | – | – | |
| TMHMM | 7 | 24 | 18 | – | – | |
| PANTHER | 19 | 457 | 439 | 4.10E-279 | – | |
| PANTHER | 19 | 457 | 439 | 4.10E-279 | ||
| Phobius | 24 | 589 | 566 | – | – | |
| Gene3D | 24 | 446 | 423 | 8.60E-74 | ||
| Pfam | 51 | 207 | 157 | 1.70E-40 | ||
| SUPERFAMILY | 54 | 442 | 389 | 1.96E-72 | ||
| Pfam | 345 | 440 | 96 | 7.20E-06 | ||
| Gene3D | 470 | 578 | 109 | 6.20E-34 | ||
| SUPERFAMILY | 471 | 579 | 109 | 3.80E-29 | ||
| SMART | 473 | 506 | 34 | 0.05 | ||
| ProSiteProfiles | 473 | 574 | 102 | 22.162 | ||
| ProSiteProfiles | 473 | 506 | 34 | 6.844 | ||
| SMART | 507 | 540 | 34 | 0.013 | ||
| ProSiteProfiles | 507 | 540 | 34 | 8.201 | ||
| SMART | 541 | 574 | 34 | 0.016 | ||
| ProSiteProfiles | 541 | 574 | 34 | 10.296 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Amidase activity | Catalysis of the reaction: a monocarboxylic acid amide + H2O = a monocarboxylate + NH3. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v3114860.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v3114860.1, powered by CORGI.
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