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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000178
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.487s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4808860.1
n.a. PREDICTED: translation initiation factor IF-2-like isoform X1 [Cicer arietinum] gi|502154667|ref|XP_004509778.1| chr1 58071813 58078537 -
3 domain predictions
3 GO terms
Lj3g3v0988820.1
n.a. PREDICTED: translation initiation factor IF-2, chloroplastic-like [Glycine max] gi|356525823|ref|XP_003531521.1| chr3 13311370 13320024 +
4 domain predictions
3 GO terms
LotjaGi1g1v0752600.1
n.a. Translation initiation factor IF-2; TAIR: AT4G11160.1 Translation initiation factor 2, small GTP-binding protein; Swiss-Prot: sp|B8EIA7|IF2_METSB Translation initiation factor IF-2; TrEMBL-Plants: tr|V7D180|V7D180_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0752600 LjG1.1_chr1 132502655 132508731 -
3 domain predictions
3 GO terms
LotjaGi1g1v0752600.2
n.a. Translation initiation factor IF-2; TAIR: AT4G11160.1 Translation initiation factor 2, small GTP-binding protein; Swiss-Prot: sp|Q5FQM3|IF2_GLUOX Translation initiation factor IF-2; TrEMBL-Plants: tr|I1NBL5|I1NBL5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0752600 LjG1.1_chr1 132502713 132506199 -
3 domain predictions
3 GO terms
LotjaGi1g1v0752600.3
n.a. Translation initiation factor IF-2; TAIR: AT4G11160.1 Translation initiation factor 2, small GTP-binding protein; Swiss-Prot: sp|Q5FQM3|IF2_GLUOX Translation initiation factor IF-2; TrEMBL-Plants: tr|I1NBL5|I1NBL5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0752600 LjG1.1_chr1 132503068 132506073 -
3 domain predictions
3 GO terms
LotjaGi1g1v0752600.4
n.a. Translation initiation factor IF-2; TAIR: AT4G11160.1 Translation initiation factor 2, small GTP-binding protein; Swiss-Prot: sp|Q5FQM3|IF2_GLUOX Translation initiation factor IF-2; TrEMBL-Plants: tr|I1NBL5|I1NBL5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0752600 LjG1.1_chr1 132503068 132506115 -
3 domain predictions
3 GO terms
LotjaGi1g1v0752600.5
n.a. Translation initiation factor IF-2; TAIR: AT4G11160.1 Translation initiation factor 2, small GTP-binding protein; Swiss-Prot: sp|Q5FQM3|IF2_GLUOX Translation initiation factor IF-2; TrEMBL-Plants: tr|I1NBL5|I1NBL5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0752600 LjG1.1_chr1 132503068 132506206 -
3 domain predictions
3 GO terms
LotjaGi3g1v0142900.1
n.a. Translation initiation factor IF-2; TAIR: AT1G17220.1 Translation initiation factor 2, small GTP-binding protein; Swiss-Prot: sp|P57997|IF2C_PHAVU Translation initiation factor IF-2, chloroplastic; TrEMBL-Plants: tr|V7BXF4|V7BXF4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0142900 LjG1.1_chr3 18962677 18971612 +
4 domain predictions
3 GO terms
LotjaGi3g1v0142900.2
n.a. Translation initiation factor IF-2; TAIR: AT1G17220.1 Translation initiation factor 2, small GTP-binding protein; Swiss-Prot: sp|P57997|IF2C_PHAVU Translation initiation factor IF-2, chloroplastic; TrEMBL-Plants: tr|V7BXF4|V7BXF4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0142900 LjG1.1_chr3 18962713 18971637 +
4 domain predictions
3 GO terms