Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0142900 |
| Transcript ID | LotjaGi3g1v0142900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Translation initiation factor IF-2; TAIR: AT1G17220.1 Translation initiation factor 2, small GTP-binding protein; Swiss-Prot: sp|P57997|IF2C_PHAVU Translation initiation factor IF-2, chloroplastic; TrEMBL-Plants: tr|V7BXF4|V7BXF4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0142900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:18962677..18971612) extracted from Lotus japonicus Gifu genome v1.2.
GAAGCTGATGAAATTCCACTTCACAATTTTCCCCAAAAAAAACCTTTGCCTTCTCATGCTTAGTTTCTTTGAGAGACATG TACCATGAAAATTGAAAAAAACAAATAATAAGGCCTTATCGCACACACAAAATTTGACAGGCAGATAAACATCCACACAT CCGAAAATCCCATAAGGTTATCCCCAACCTCAATATCCACAAAATCACTTCTTCACTTATTGCATGTTCTACTTCAATTC TGCACACAACGTTTCACTCTCTGAACTTGAGGTACTTCCTTCTTGTTCTTTTGGGGTCTGAAAATTCATATTTCTCTTGT TTCTCCTCTTTTCATGGGAAAACACTTTCTGGGTAGGTTCAATTCTTAGCTGGGGTGTGTTCTATAATGAGGAACTGTTG AGGTTTCATTGTTTGGAGCTTTTTGTTTCTGTTTTTGTTTTGTGGGGTGAGGCTAAATATGCTTATATTGGTGGGGAACG TGCAAGGAACAATGAGTTCTCTTGCTTCCCCAGTGAGTTTGGGGAGTCTTACAGGGGTGAGTTCCTCTGGGAGGTCTCAT TCTGTTGTGAGGAGAGTCTCTCTTTCTAGAGGGAACTGTAAGAAGAACAAGAAATGGCATTGTGTGTCCTTTTCTATCTG TAGATATTCAGTCACCACAACTGATTTTATTGCTGACCAAGGCAATTCAGTGTCCCTTGATTCTAGTAGTGATAGTAAAG GTGGAGATAGTAGTGCTGGTTTTGTCCTTAAGCCTCCTCCTAAGCCTGTGTTGAAGTCCCCGGGCGATAAGGGGGACCCC ATTTTAGGCTCAGGTTCTTGGGGGGGTTCAAGGAAAACTGAGGACTCGGATGATGTCGAAGAGAGGAATAAAGTGATTGA ATCGCTTGGAGAGGTATTGGAGAAGGCTGAAAAGCTGGGAAGTCCTAAATTGGATGGGGAAAGAAATAACGGGTCGGTAA ATAAACCGGCAAGACCTGATGTTAATGCTAATCCTAGGGCTGATAATAAGCCTGTAAATTCAGTAAAAACCCAGAAGTCT AAAACCTTGAAGAGTGTATGGCGTAAAGGGGACACAGTTGCAACTGTGAAGAAGGTTGTGAAAGAAGTGCCGAGGCCTAC TAGCAAGATTGAAGTGGGGAAATCTGAAATTGGGGGAGAGGAGAAGGTTACACCGCAGTCTCGTGCTCCTCAGCCTCCTT CAAAACCTCAACCAATGTTACAATCGAAGCCTTCTATAGCTCCCCCACCCATAAAAAAACCTGTTGTGTTGAAGGATAAG GGGGAAGCTGAACCAACTGTTAAATCAAAAGAAAGGAAGCCCATCTTGATTGATAAGTTCGCATCCAAGAAACCAGCAGT TGATCCTTCAATTGCTCAAGCAGTTCTGGCCCCTCCAAAACCAGGGAAGGCTCCTCCCCCAGGAAAGTTTAAAGATGATT ACCGGAGGAAAGGTGCTCCCACTGGGGGAGGACCAAGAAGACGACTAGTAGCTGATGATATGATTGCTGATGAGGACACA TCAGAACTCAATGTCTCTATTCCTGGTAAAACAAGAAAAGGAAGGAAATGGAGTAAAGCAAGCCGAAAGGCAGCAAGACT CCAGGCGGCCAAGGATGCAGCTCCTGTCAAAGTAGAAATTCTTGAGGTCGATGAAAAAGGTATGCTGGTGGAGGAGTTGG CCTACAATTTGGCAATCAGCGAAGGTGAAATCCTGGGTATTCTATACGCTAAGGGGATTAAACCAGATGGGGTACAAACT CTAGACAAAGATATGGTGAGGATGATTTGTAATGAGTACGATGTTGAAGTTATAGATGCTGATCCTGTCAAAGTTGAAGG ATTAATGAAGAAAAGAGACATTCTTGATGAAGGTGACCTTGACAAACTCAAAGATAGGCCTCCTGTCATTACTATTATGG GCCATGTAGATCATGGCAAGGTAAGTGACATCACTCTGTATTCTTCCTTTCTCTCTGATTTTTCACCTTGAATTCTTCCA TTTCCTGATATTTGTTGTTATTATCAATTGGCAGACAACACTTTTGGATTATATACGGAAGAGCAAGGTATGGTGAAAAT TTAATAAAACCATTATGCTTCTTTCTGTTCATGGGCATTGGCATATGAACATGGATGTTTACTTCTGTGAATGATTGTGA TTATGTTTTAGATATCTTTTACGTGATATGATTAGGTTAGCACAATAGGTTAGATATGCTAAATTTGATATTTCCCCCCT TTTTAGCAATAATTAGCAATAGATGTTGTTTATGTGTTCCTAAAATGCGATGTTGAACCCTGTGTCCTTTTGTCGACTTT GCTATACTGACTTTGTCTTGTGCTTTTCATAGTATCTAAGATGGTAAAAAATCTTATTGCTGGAGCTCCACCTACTGTTG CCATATTACTCTCCTGATACACCAATTGTTAACAGGTAGTTGCTTCAGAAGCTGGTGGGATCACACAGGGAATTGGGGCT TATAAAGTGCAAGTACCTATTGATGGTAAACCATTGCCTTGTGTTTTCCTTGACACTCCTGGGCATGAGGTATGCTGAGT TTTAATAAAAAATGTTCATTTCTAACTTTTTTCTTAAGAATATGTAAAACTACTTGTGCTTTTCATTCTGCTGAATTGTG GTTGGCACCTGTAGTCCATATGATGACTTACTTGTGCTGGTCTGTAGTTTTTAGCTAAATTATTAACTATAGCTGTAACC CAACTTGCACTTTTTTATCCTCTAGGCATTTGGCGCAATGAGAGCCCGTGGAGCAAGTGTAACAGACATTGTCATTATTG TTGTGGCTGCTGATGACGGTATTCGTCCACAGACAAATGAAGCTATAGCTCATGCCAAAGCAGCAGGAGTGCCCATAATC ATTGCTATAAATAAGGCAGGCCAACTTGATGTTTCTCCAAATTTTTTTTATAATTCTAATGCTTTACTTGGTGGTGGGTT CAGGAGCCTTTTGCACTAAATTATTTATTTACTTGAAACAGATAGATAAAGATGGTGCAAATCCAGAACGAGTAATGCAA GAGCTTTCTTCGATTGGTTTAATGCCAGAAGACTGGGGTGGTGACATCCCAATGGTTCAGGTTTATATTTCTTATTTATA GGAATCATACTCAATATTTGTTTGTGCTTCTGTAATTTTTAGGAAGTTATATTTTGCTTGCTTTCCCTTTTGTCAACAGA TAAGTGCTCTTCAAGGGAAGAACGTAGATGATCTTTTAGAAACTGTTATGCTTGTTGCTGAGGTAACTTGTTCACCTTTG TTGTTATTACTAGTTTAAGTCACTTGAAGCTCCGACTATTCTATAACTTTATCTGATTCTGGTTATATAAATTTTAATGT TATTATGTTGTAGTATATTGATAGAAAGGCATGTACTTTGTGGTCATTAGCTGGAAAGTAATCAGTATTGGAGCAATTTT TCACGCATCACAACTTCTTGCTATTTGCTCAATGATAGATAGTTTGATCCCCTTCTTTCGTATCTTTGATTGATACAATC CTCTCTGATGCACATTGTATATTCTAAAGCTTTCTCCATGTTGCTGACACCTTGATTAAATTTTGTTGTTTTTTATGGGA CTGAGAAGATCGATTAATTGGCAGTGCTTGGTTATAATTCACACACTTTGTTGTCTTTCTTTTATCTTCCTGGTATTCAT CCTGACCTAAGCATTAATGGTTTAGTTGCAAGAACTGAAAGCTAATCCTGATAGAAGTGCAAAGGGCACAGTCATCGAGG CAGGGCTAGATAAATCAAAAGGACCATTTGCTACATTTATTGTACAGAATGGTTCCCTTAAAAGGGGAGATATAGTAGTT TGCGGAGAAGCATTCGGAAAGGTTCGTAGATACCATTCTATATTTAATGACCTTAACATTTGGTTATTGAGTTAATTTTG GGTCTTTGTTTTCTCTGCAATTTGATAAGCATCTTTTATTTACTTCGAGCAGGTGCGGGCTCTATTTGATGATGGTGGAA AGCGTGTTGATGTAGCTACACCTTCTATACCTGTACAGGTTTGTAAATTCTTAGTTCAAATAACTGAATGAGGGCATATG ATACATTGCTTCTTTTCTTTCCTTGAGAACATTTCCCTGTTAAGAAATTGCCCAGTAAAATAAAGAATGCATAGTACCAG GGGGCGGGGGGTGGTGAGAAGTATAGTGAGGACATCATCTCCCATTAGGCATATTAAGCTTAAAGTACAACTTTTATTCT GAAACAGTGTCGTGCCTCGTTTAATTATATGATTGACATATACATGTTTGTGGTTTCCCTTGACCATTCACGTGTGCATG AACTGAATCATTCCAAGTATCAAGTATAAGTTTGCTACTCAACATAAGTGCTGTATGCTGATAAAGTTTACTCATCTCCA ATTAGAATATAAATTTGAACTCAATAGTTGACACCATCATGGTTGGCATTTGTGTCACAGGTTGTGGTTAGATTTTTGAG TTTTTACAATCAAATAATGTGTATTTCACACCAAACAATATTTTGATCAGGTTTTTCCCCTGTAACCTTTGGTATTTCAC TGAGTGTTTATCCAGCACTCTGCCATTGTTGGCACCATACGGACTGGCAGGGGAAGAATATGTTAGAGCTGCGTATCAGT AGTATTAGTAATTAATTAGTCTAAAAAGAAGCAATCAGTCTGATTCATTTGTAGGTGGGGACTTCATTTGTTTAAAGAGA CTTGTATTTCTGATTTAAAGAAATGCTTTCCTTCCACATTAAACACGTAGAAGATGGAAATCTTTTTGCACCAAAAAAAG ATGAAAATCTTTAGGTGACATCCATTTACTGTTAGTAGCATGGGAAAGGATTTACAATGGCGGAGAGTGAAACGCCTTTA TAGACTGATTTTTCTTAGTTACAATTTCGTTAATTTTGAAGTGCCATGCAGATTGTGAGGTATTGGATAATGCCAAAAGT TTACCTATTTCAAAATTTTCTCATGTCTTCTATGCATCACAGGTTATTGGATTGAATCATGTTCCTATTGCTGGCGATGT ATTTGAGGTTGTTGAGTCCCTTGATACTGCACGTGAAAGAGCAGATTCCCGTGCTGAGTCATTGCGAAATGAGCGTATTT CAGCAAAGGCAGGGGATGGCAAGGTCACCCTTTCTTCCTTAGCTTCTGCAGTTTCATCAGGAAAGCTTTCTGGATTAGAT CTGCACCAGCTAAACATTATTTTGAAGGTTGATCTTCAGGTATAGTCACTGCTGCTCTTGTTATTGATTTGTTCCTACAT CTTGTTGATTTTGAATATGGAACATTTACCTTGTTATGCTTATTTCTTAAGTGATATCATGCTGTGATTTTACATTATAT CCAATCATTGTAATAAGGTCGTGATTTATGTACCTCACAACACTACCCTGGATATTTACCTGATGAATTTATCATATAAC TTACAGCCACAAAAAAAAAGGTTCTGAGCACTTTTTCTTGCATGCAAAGATGTGCACGCCTATAGAGAGTAGACTAGTAT AATATAGCTATTGATAATTAGCCAAAGATGTACTGACCCTGCACTTTAACGCAATCAACTTACCAAGACATGGTTAGATA TCTGTCTGCAAGGAAACATCTTAGTTTGTGAGACATGCAGCATGCTTGGTTATGCTTGTCTAATTCTGAGTGTAGCCTAT GTGAGAAGGCTTTCACTACCAAATATGATAAGCACAATAACTGGTAAAAATTTATCCAATTCTTCATAGTTCTCGATAAA TATGTAAATCTGTTGTATGCGGGACTGATGTTAACAATAGGTAAACATACACTAAAGCTGGCATTTTCTGTTTTATACTA AATGACTACTACTTCAATATGTTTCCATGCACCATCATCACATTGGTTATTGCTTCTTGTGGAATTAAAATATTATTTTT TATCCTGCTAGGGATCCATTGAAGCTGTCAAGCAAGCCCTGCAGGTGCTACCACAAGATAATGTCACGCTGAAGTTTTTA TTGGAAACAACTGGGGATGTAAGCACAAGTGATGTTGACCTTGCGGTTGCAAGTAAAGCCATTATCTTTGGATTTAATGT CAAGGCACCAGGCCCTGTCAAAACCTATGCAGACAACAAAGCTGTTGAAATTAGAATATATAGAGTTATTTATGAATTAA TTGATGATGTACGAAATGCAATGGAAGGGCTCCTGGACCTTGTTGAGGTAAATCACCATATATTTTAATTTGTAAACTTA GTTAGATTAGGCACATGCACACTGATTAATATGACATTTACGTACATCGGAGCTTGTAAAGAAAATATGTCAAATGACAT ATAATTGTGTTCTACACTTTGTTTTAGAAAGCTTACTTCTTGTAGACTTTATTGTATAGTTCCTGTTTTATTTTGTTTTA ACACAATCATATCTTGCTGTTAGCATGCATCATGTAGTGTCACCTGTCGACCAGATTTCCCACCTGGTTATTCCTCATCA TTTATGGTCCATGGACCTTTTTCATTTGAAGTTAATGAATATTTTATTATTTACGAATTTAGAAGTTGCTGATGATTCAG CTGCAATACTTACTCGTTCCTATCTTTTCGTAGGAACACATAACAATTGGTTCAGCAGAAGTGCGGGCCACATTCAGCAG TGGTAGTGGTCGTGTTGCTGGATGTATGATCACGGACGGAAAGATACAAAGTGGCTGTGGTATTCGAGTCATTCGGAAGA AAAAAACGGTTCATGTTGGTACTCTTGTTTCCTTGAGACGGGTGAAGGAGATTGTTAAAGAGGTATAAACACTGCTTCCA CTATTTCCCCCCCATCTTTACAATTTATATAAAAAAAAATCTTTGCAACAAAGGCATGCTGCAAGTATGAAAATGTTTAG GCAATGGTTTCTCCTCAATTTTAAGAATTTTTTTAAATGTGAAGCCTGTTATTGTCAATTCATTTTGATTTGCATTTGGC TATTAGGAATGGGCAAATATGTTCTTTGTTTTTTTTCTCTTTTTCAAATTATCCTTTACCTGTTAAATATGCTATCATTT GAAGACAGTATTATCTTGTGATAAAGAATGATGATAACTATGGATTTTCAGAAGAATTCTACATTTTCTGCTTTATTATC TACATCTGCATGGATTAATTTACTTTAGGTGCTCGAGTGTAAACCCAACGAAACTACCTCTCTTTGGATTTTTAAATTTT AATCACTTAATAAGCTTTGGTTGATATTATTAGATGCTCAAACTTGCAATTTTGACTGCCTGTTTAGCTTATTTACTTCC ATGCATTTATTATGATTGCTGTTGTGGATTTGCAATGTTGTTCCACTGTAAGAATCATCTTATTAGTTTTTGTCTTGTAG TTTGCATGTATCAAATGCATCATATAGATCCTTTGACGCTTTATCATTACTCAATTTTGTAATCCAATTTGTCTGACTTG CTTTTTTTGGCTAATGTTGAATCTCACATTACCTTGCATGGTTTGTCCCCTGTCATATGCTCATGATACATCTGCTCTTT GGTAGTTTTTTGTTGTTCTCTGGTATGAAAATTAAATAGTTGCTCCTCAAATGTGAAAAATATGAGGAGAAAAGCACGAC TAAGCTTCGCTTGCTAGGGTTAGCTACAGGGATCAATCAACACCATCAGGCATTGATCCAAAATCAAATTTTTTAACGAA ACCATAACAATATAGGGCAAGGTCATTTTTTTGAAAAAAATAAATTTGAACAGTGTCTCCTAAATCCTAATCTGGATATT TATTGTATGGATTTCGTTTTCATTCAATTTTTAGTCAATGGACTATATCCACCTATTTGAAGGTCTAAAAGAAGGTTTTT ATTACAAGTGAAATGTGCCACTTTCTTATTTATGGATATCATGTTGTGTGTCGTACACGGACCATGAATCAGATTTGAAC TTGATATATACTTGTTCCTTGAGATGTCTTCTATTAAATGATTTTGAGGAATAATTAGTGTTAGATGTTACCGTTTCTGA ATTTGATTAACTTTTTGTTGCTGGTTTATAAGCAAAGTTGAGCAGTTGCTTGTGGTTTTTACCTATTGTTGTCTTTAATA GCTGTATGTTGGTTCTCCATAATATTATAGCCACTGCCTGGATTCACATTCCTTTTCTCTTCCTTGTGAACAGGTAAATG CTGGTCTTGAGTGCGGACTTGGGTTAGAGGACTTTGATGATTGGGAAGAGGGAGATTTTGTTGAAGCCTTCAACACAGTT CAGAAGAAGAGGACCCTTGAAGAGGCCTCAGCATCAATGGCAGCTGCTGTGGAGGGAGTAGGAGTTAAACTATAGAATGA ACAATGAAGCGACACTACGAAAAGGGTTCCTATTTTGTGTTTGAGAGTGTCCGGAAAAGCATTCGGCGTTCGTGCTTAAC AAAAAAAAACCCCGATTTCTCTCAAATTGATGTTGTGATATTGGGAAGAGGTAACATTGAAGGTGGCAGCTGAAGATCTA AAGTTCAAATTGATTTGTTCCTTTTGTTTGTTGTAGAGGTGTATATAACAACATACATTAGTTTCAGCTCCATGTAAAGA GGGTAAAAGTTTCAATGCCTTGACCCAGAAATGCTTGTAACACCCACGTATAAGACAAGGAAAGAAAAAGAATTGCAATT TTCCCTTTCATTTTTTGTATGATGCTCTGAAATGGATGGCATCATCTTATTTTTTATAAAAGGAGAAGAAAAAAAATGGA TGCATCATTTCAGAGGTCTGTGAAATTGTATCTCAACTGTGTTTTGTTCCTAGATCATATATACTCAAATGGTCTATAGA CTGCATCGTTGTAAATGTTTTGGCTGAAAATACTCGCTGTTAGTATTTGCTCCCAATTTAAAGAAATACTAGTATGTATA CCCGTGCATCGGCACAGGGGACATATTTCCAAGTATATAATAGTTTGTTTTTAATA
CDS sequence (LotjaGi3g1v0142900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTATATTGGTGGGGAACGTGCAAGGAACAATGAGTTCTCTTGCTTCCCCAGTGAGTTTGGGGAGTCTTACAGGGGT GAGTTCCTCTGGGAGGTCTCATTCTGTTGTGAGGAGAGTCTCTCTTTCTAGAGGGAACTGTAAGAAGAACAAGAAATGGC ATTGTGTGTCCTTTTCTATCTGTAGATATTCAGTCACCACAACTGATTTTATTGCTGACCAAGGCAATTCAGTGTCCCTT GATTCTAGTAGTGATAGTAAAGGTGGAGATAGTAGTGCTGGTTTTGTCCTTAAGCCTCCTCCTAAGCCTGTGTTGAAGTC CCCGGGCGATAAGGGGGACCCCATTTTAGGCTCAGGTTCTTGGGGGGGTTCAAGGAAAACTGAGGACTCGGATGATGTCG AAGAGAGGAATAAAGTGATTGAATCGCTTGGAGAGGTATTGGAGAAGGCTGAAAAGCTGGGAAGTCCTAAATTGGATGGG GAAAGAAATAACGGGTCGGTAAATAAACCGGCAAGACCTGATGTTAATGCTAATCCTAGGGCTGATAATAAGCCTGTAAA TTCAGTAAAAACCCAGAAGTCTAAAACCTTGAAGAGTGTATGGCGTAAAGGGGACACAGTTGCAACTGTGAAGAAGGTTG TGAAAGAAGTGCCGAGGCCTACTAGCAAGATTGAAGTGGGGAAATCTGAAATTGGGGGAGAGGAGAAGGTTACACCGCAG TCTCGTGCTCCTCAGCCTCCTTCAAAACCTCAACCAATGTTACAATCGAAGCCTTCTATAGCTCCCCCACCCATAAAAAA ACCTGTTGTGTTGAAGGATAAGGGGGAAGCTGAACCAACTGTTAAATCAAAAGAAAGGAAGCCCATCTTGATTGATAAGT TCGCATCCAAGAAACCAGCAGTTGATCCTTCAATTGCTCAAGCAGTTCTGGCCCCTCCAAAACCAGGGAAGGCTCCTCCC CCAGGAAAGTTTAAAGATGATTACCGGAGGAAAGGTGCTCCCACTGGGGGAGGACCAAGAAGACGACTAGTAGCTGATGA TATGATTGCTGATGAGGACACATCAGAACTCAATGTCTCTATTCCTGGTAAAACAAGAAAAGGAAGGAAATGGAGTAAAG CAAGCCGAAAGGCAGCAAGACTCCAGGCGGCCAAGGATGCAGCTCCTGTCAAAGTAGAAATTCTTGAGGTCGATGAAAAA GGTATGCTGGTGGAGGAGTTGGCCTACAATTTGGCAATCAGCGAAGGTGAAATCCTGGGTATTCTATACGCTAAGGGGAT TAAACCAGATGGGGTACAAACTCTAGACAAAGATATGGTGAGGATGATTTGTAATGAGTACGATGTTGAAGTTATAGATG CTGATCCTGTCAAAGTTGAAGGATTAATGAAGAAAAGAGACATTCTTGATGAAGGTGACCTTGACAAACTCAAAGATAGG CCTCCTGTCATTACTATTATGGGCCATGTAGATCATGGCAAGACAACACTTTTGGATTATATACGGAAGAGCAAGGTAGT TGCTTCAGAAGCTGGTGGGATCACACAGGGAATTGGGGCTTATAAAGTGCAAGTACCTATTGATGGTAAACCATTGCCTT GTGTTTTCCTTGACACTCCTGGGCATGAGGCATTTGGCGCAATGAGAGCCCGTGGAGCAAGTGTAACAGACATTGTCATT ATTGTTGTGGCTGCTGATGACGGTATTCGTCCACAGACAAATGAAGCTATAGCTCATGCCAAAGCAGCAGGAATAGATAA AGATGGTGCAAATCCAGAACGAGTAATGCAAGAGCTTTCTTCGATTGGTTTAATGCCAGAAGACTGGGGTGGTGACATCC CAATGGTTCAGATAAGTGCTCTTCAAGGGAAGAACGTAGATGATCTTTTAGAAACTGTTATGCTTGTTGCTGAGTTGCAA GAACTGAAAGCTAATCCTGATAGAAGTGCAAAGGGCACAGTCATCGAGGCAGGGCTAGATAAATCAAAAGGACCATTTGC TACATTTATTGTACAGAATGGTTCCCTTAAAAGGGGAGATATAGTAGTTTGCGGAGAAGCATTCGGAAAGGTGCGGGCTC TATTTGATGATGGTGGAAAGCGTGTTGATGTAGCTACACCTTCTATACCTGTACAGGTTATTGGATTGAATCATGTTCCT ATTGCTGGCGATGTATTTGAGGTTGTTGAGTCCCTTGATACTGCACGTGAAAGAGCAGATTCCCGTGCTGAGTCATTGCG AAATGAGCGTATTTCAGCAAAGGCAGGGGATGGCAAGGTCACCCTTTCTTCCTTAGCTTCTGCAGTTTCATCAGGAAAGC TTTCTGGATTAGATCTGCACCAGCTAAACATTATTTTGAAGGTTGATCTTCAGGGATCCATTGAAGCTGTCAAGCAAGCC CTGCAGGTGCTACCACAAGATAATGTCACGCTGAAGTTTTTATTGGAAACAACTGGGGATGTAAGCACAAGTGATGTTGA CCTTGCGGTTGCAAGTAAAGCCATTATCTTTGGATTTAATGTCAAGGCACCAGGCCCTGTCAAAACCTATGCAGACAACA AAGCTGTTGAAATTAGAATATATAGAGTTATTTATGAATTAATTGATGATGTACGAAATGCAATGGAAGGGCTCCTGGAC CTTGTTGAGGAACACATAACAATTGGTTCAGCAGAAGTGCGGGCCACATTCAGCAGTGGTAGTGGTCGTGTTGCTGGATG TATGATCACGGACGGAAAGATACAAAGTGGCTGTGGTATTCGAGTCATTCGGAAGAAAAAAACGGTTCATGTTGGTACTC TTGTTTCCTTGAGACGGGTGAAGGAGATTGTTAAAGAGGTAAATGCTGGTCTTGAGTGCGGACTTGGGTTAGAGGACTTT GATGATTGGGAAGAGGGAGATTTTGTTGAAGCCTTCAACACAGTTCAGAAGAAGAGGACCCTTGAAGAGGCCTCAGCATC AATGGCAGCTGCTGTGGAGGGAGTAGGAAGGTGTATATAA
Protein sequence (LotjaGi3g1v0142900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLILVGNVQGTMSSLASPVSLGSLTGVSSSGRSHSVVRRVSLSRGNCKKNKKWHCVSFSICRYSVTTTDFIADQGNSVSL DSSSDSKGGDSSAGFVLKPPPKPVLKSPGDKGDPILGSGSWGGSRKTEDSDDVEERNKVIESLGEVLEKAEKLGSPKLDG ERNNGSVNKPARPDVNANPRADNKPVNSVKTQKSKTLKSVWRKGDTVATVKKVVKEVPRPTSKIEVGKSEIGGEEKVTPQ SRAPQPPSKPQPMLQSKPSIAPPPIKKPVVLKDKGEAEPTVKSKERKPILIDKFASKKPAVDPSIAQAVLAPPKPGKAPP PGKFKDDYRRKGAPTGGGPRRRLVADDMIADEDTSELNVSIPGKTRKGRKWSKASRKAARLQAAKDAAPVKVEILEVDEK GMLVEELAYNLAISEGEILGILYAKGIKPDGVQTLDKDMVRMICNEYDVEVIDADPVKVEGLMKKRDILDEGDLDKLKDR PPVITIMGHVDHGKTTLLDYIRKSKVVASEAGGITQGIGAYKVQVPIDGKPLPCVFLDTPGHEAFGAMRARGASVTDIVI IVVAADDGIRPQTNEAIAHAKAAGIDKDGANPERVMQELSSIGLMPEDWGGDIPMVQISALQGKNVDDLLETVMLVAELQ ELKANPDRSAKGTVIEAGLDKSKGPFATFIVQNGSLKRGDIVVCGEAFGKVRALFDDGGKRVDVATPSIPVQVIGLNHVP IAGDVFEVVESLDTARERADSRAESLRNERISAKAGDGKVTLSSLASAVSSGKLSGLDLHQLNIILKVDLQGSIEAVKQA LQVLPQDNVTLKFLLETTGDVSTSDVDLAVASKAIIFGFNVKAPGPVKTYADNKAVEIRIYRVIYELIDDVRNAMEGLLD LVEEHITIGSAEVRATFSSGSGRVAGCMITDGKIQSGCGIRVIRKKKTVHVGTLVSLRRVKEIVKEVNAGLECGLGLEDF DDWEEGDFVEAFNTVQKKRTLEEASASMAAAVEGVGRCI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Hamap | 7 | 979 | 973 | 14.946 | ||
| MobiDBLite | 78 | 136 | 59 | - | – | |
| MobiDBLite | 150 | 200 | 51 | - | – | |
| MobiDBLite | 181 | 195 | 15 | - | – | |
| PANTHER | 192 | 981 | 790 | 1.0E-270 | – | |
| PANTHER | 192 | 981 | 790 | 1.0E-270 | ||
| MobiDBLite | 214 | 232 | 19 | - | – | |
| MobiDBLite | 214 | 289 | 76 | - | – | |
| MobiDBLite | 243 | 265 | 23 | - | – | |
| MobiDBLite | 269 | 289 | 21 | - | – | |
| MobiDBLite | 305 | 341 | 37 | - | – | |
| MobiDBLite | 320 | 334 | 15 | - | – | |
| TIGRFAM | 401 | 981 | 581 | 1.1E-199 | ||
| SUPERFAMILY | 474 | 646 | 173 | 5.52E-40 | ||
| Gene3D | 476 | 645 | 170 | 5.6E-56 | – | |
| ProSiteProfiles | 479 | 643 | 165 | 32.935 | ||
| TIGRFAM | 481 | 633 | 153 | 5.6E-22 | ||
| CDD | 482 | 639 | 158 | 3.67694E-84 | – | |
| PRINTS | 483 | 496 | 14 | 1.3E-5 | ||
| Pfam | 484 | 635 | 152 | 2.8E-20 | ||
| PRINTS | 535 | 545 | 11 | 1.3E-5 | ||
| PRINTS | 551 | 562 | 12 | 1.3E-5 | ||
| SUPERFAMILY | 646 | 730 | 85 | 1.1E-24 | ||
| Gene3D | 646 | 760 | 115 | 2.9E-36 | – | |
| CDD | 650 | 744 | 95 | 1.21435E-40 | – | |
| Coils | 729 | 749 | 21 | - | – | |
| SUPERFAMILY | 777 | 889 | 113 | 6.93E-27 | ||
| Gene3D | 778 | 882 | 105 | 2.4E-32 | ||
| Pfam | 780 | 871 | 92 | 4.4E-28 | ||
| Gene3D | 883 | 980 | 98 | 4.3E-26 | – | |
| SUPERFAMILY | 886 | 979 | 94 | 1.39E-24 | ||
| CDD | 889 | 971 | 83 | 1.72003E-32 | – | |
| ProSitePatterns | 932 | 954 | 23 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Translation initiation factor activity | Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide. | ||
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. | ||
| Biological process | Translational initiation | The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA. |
Expression pattern of LotjaGi3g1v0142900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…