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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0142900 |
| Transcript ID | LotjaGi3g1v0142900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Translation initiation factor IF-2; TAIR: AT1G17220.1 Translation initiation factor 2, small GTP-binding protein; Swiss-Prot: sp|P57997|IF2C_PHAVU Translation initiation factor IF-2, chloroplastic; TrEMBL-Plants: tr|V7BXF4|V7BXF4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0142900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:18962713..18971637) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAACCTTTGCCTTCTCATGCTTAGTTTCTTTGAGAGACATGTACCATGAAAATTGAAAAAAACAAATAATAAGGCCT TATCGCACACACAAAATTTGACAGGCAGATAAACATCCACACATCCGAAAATCCCATAAGGTTATCCCCAACCTCAATAT CCACAAAATCACTTCTTCACTTATTGCATGTTCTACTTCAATTCTGCACACAACGTTTCACTCTCTGAACTTGAGGTACT TCCTTCTTGTTCTTTTGGGGTCTGAAAATTCATATTTCTCTTGTTTCTCCTCTTTTCATGGGAAAACACTTTCTGGGTAG GTTCAATTCTTAGCTGGGGTGTGTTCTATAATGAGGAACTGTTGAGGTTTCATTGTTTGGAGCTTTTTGTTTCTGTTTTT GTTTTGTGGGGTGAGGCTAAATATGCTTATATTGGTGGGGAACGTGCAAGGAACAATGAGTTCTCTTGCTTCCCCAGTGA GTTTGGGGAGTCTTACAGGGGTGAGTTCCTCTGGGAGGTCTCATTCTGTTGTGAGGAGAGTCTCTCTTTCTAGAGGGAAC TGTAAGAAGAACAAGAAATGGCATTGTGTGTCCTTTTCTATCTGTAGATATTCAGTCACCACAACTGATTTTATTGCTGA CCAAGGCAATTCAGTGTCCCTTGATTCTAGTAGTGATAGTAAAGGTGGAGATAGTAGTGCTGGTTTTGTCCTTAAGCCTC CTCCTAAGCCTGTGTTGAAGTCCCCGGGCGATAAGGGGGACCCCATTTTAGGCTCAGGTTCTTGGGGGGGTTCAAGGAAA ACTGAGGACTCGGATGATGTCGAAGAGAGGAATAAAGTGATTGAATCGCTTGGAGAGGTATTGGAGAAGGCTGAAAAGCT GGGAAGTCCTAAATTGGATGGGGAAAGAAATAACGGGTCGGTAAATAAACCGGCAAGACCTGATGTTAATGCTAATCCTA GGGCTGATAATAAGCCTGTAAATTCAGTAAAAACCCAGAAGTCTAAAACCTTGAAGAGTGTATGGCGTAAAGGGGACACA GTTGCAACTGTGAAGAAGGTTGTGAAAGAAGTGCCGAGGCCTACTAGCAAGATTGAAGTGGGGAAATCTGAAATTGGGGG AGAGGAGAAGGTTACACCGCAGTCTCGTGCTCCTCAGCCTCCTTCAAAACCTCAACCAATGTTACAATCGAAGCCTTCTA TAGCTCCCCCACCCATAAAAAAACCTGTTGTGTTGAAGGATAAGGGGGAAGCTGAACCAACTGTTAAATCAAAAGAAAGG AAGCCCATCTTGATTGATAAGTTCGCATCCAAGAAACCAGCAGTTGATCCTTCAATTGCTCAAGCAGTTCTGGCCCCTCC AAAACCAGGGAAGGCTCCTCCCCCAGGAAAGTTTAAAGATGATTACCGGAGGAAAGGTGCTCCCACTGGGGGAGGACCAA GAAGACGACTAGTAGCTGATGATATGATTGCTGATGAGGACACATCAGAACTCAATGTCTCTATTCCTGGTAAAACAAGA AAAGGAAGGAAATGGAGTAAAGCAAGCCGAAAGGCAGCAAGACTCCAGGCGGCCAAGGATGCAGCTCCTGTCAAAGTAGA AATTCTTGAGGTCGATGAAAAAGGTATGCTGGTGGAGGAGTTGGCCTACAATTTGGCAATCAGCGAAGGTGAAATCCTGG GTATTCTATACGCTAAGGGGATTAAACCAGATGGGGTACAAACTCTAGACAAAGATATGGTGAGGATGATTTGTAATGAG TACGATGTTGAAGTTATAGATGCTGATCCTGTCAAAGTTGAAGGATTAATGAAGAAAAGAGACATTCTTGATGAAGGTGA CCTTGACAAACTCAAAGATAGGCCTCCTGTCATTACTATTATGGGCCATGTAGATCATGGCAAGGTAAGTGACATCACTC TGTATTCTTCCTTTCTCTCTGATTTTTCACCTTGAATTCTTCCATTTCCTGATATTTGTTGTTATTATCAATTGGCAGAC AACACTTTTGGATTATATACGGAAGAGCAAGGTATGGTGAAAATTTAATAAAACCATTATGCTTCTTTCTGTTCATGGGC ATTGGCATATGAACATGGATGTTTACTTCTGTGAATGATTGTGATTATGTTTTAGATATCTTTTACGTGATATGATTAGG TTAGCACAATAGGTTAGATATGCTAAATTTGATATTTCCCCCCTTTTTAGCAATAATTAGCAATAGATGTTGTTTATGTG TTCCTAAAATGCGATGTTGAACCCTGTGTCCTTTTGTCGACTTTGCTATACTGACTTTGTCTTGTGCTTTTCATAGTATC TAAGATGGTAAAAAATCTTATTGCTGGAGCTCCACCTACTGTTGCCATATTACTCTCCTGATACACCAATTGTTAACAGG TAGTTGCTTCAGAAGCTGGTGGGATCACACAGGGAATTGGGGCTTATAAAGTGCAAGTACCTATTGATGGTAAACCATTG CCTTGTGTTTTCCTTGACACTCCTGGGCATGAGGTATGCTGAGTTTTAATAAAAAATGTTCATTTCTAACTTTTTTCTTA AGAATATGTAAAACTACTTGTGCTTTTCATTCTGCTGAATTGTGGTTGGCACCTGTAGTCCATATGATGACTTACTTGTG CTGGTCTGTAGTTTTTAGCTAAATTATTAACTATAGCTGTAACCCAACTTGCACTTTTTTATCCTCTAGGCATTTGGCGC AATGAGAGCCCGTGGAGCAAGTGTAACAGACATTGTCATTATTGTTGTGGCTGCTGATGACGGTATTCGTCCACAGACAA ATGAAGCTATAGCTCATGCCAAAGCAGCAGGAGTGCCCATAATCATTGCTATAAATAAGGCAGGCCAACTTGATGTTTCT CCAAATTTTTTTTATAATTCTAATGCTTTACTTGGTGGTGGGTTCAGGAGCCTTTTGCACTAAATTATTTATTTACTTGA AACAGATAGATAAAGATGGTGCAAATCCAGAACGAGTAATGCAAGAGCTTTCTTCGATTGGTTTAATGCCAGAAGACTGG GGTGGTGACATCCCAATGGTTCAGGTTTATATTTCTTATTTATAGGAATCATACTCAATATTTGTTTGTGCTTCTGTAAT TTTTAGGAAGTTATATTTTGCTTGCTTTCCCTTTTGTCAACAGATAAGTGCTCTTCAAGGGAAGAACGTAGATGATCTTT TAGAAACTGTTATGCTTGTTGCTGAGGTAACTTGTTCACCTTTGTTGTTATTACTAGTTTAAGTCACTTGAAGCTCCGAC TATTCTATAACTTTATCTGATTCTGGTTATATAAATTTTAATGTTATTATGTTGTAGTATATTGATAGAAAGGCATGTAC TTTGTGGTCATTAGCTGGAAAGTAATCAGTATTGGAGCAATTTTTCACGCATCACAACTTCTTGCTATTTGCTCAATGAT AGATAGTTTGATCCCCTTCTTTCGTATCTTTGATTGATACAATCCTCTCTGATGCACATTGTATATTCTAAAGCTTTCTC CATGTTGCTGACACCTTGATTAAATTTTGTTGTTTTTTATGGGACTGAGAAGATCGATTAATTGGCAGTGCTTGGTTATA ATTCACACACTTTGTTGTCTTTCTTTTATCTTCCTGGTATTCATCCTGACCTAAGCATTAATGGTTTAGTTGCAAGAACT GAAAGCTAATCCTGATAGAAGTGCAAAGGGCACAGTCATCGAGGCAGGGCTAGATAAATCAAAAGGACCATTTGCTACAT TTATTGTACAGAATGGTTCCCTTAAAAGGGGAGATATAGTAGTTTGCGGAGAAGCATTCGGAAAGGTTCGTAGATACCAT TCTATATTTAATGACCTTAACATTTGGTTATTGAGTTAATTTTGGGTCTTTGTTTTCTCTGCAATTTGATAAGCATCTTT TATTTACTTCGAGCAGGTGCGGGCTCTATTTGATGATGGTGGAAAGCGTGTTGATGTAGCTACACCTTCTATACCTGTAC AGGTTTGTAAATTCTTAGTTCAAATAACTGAATGAGGGCATATGATACATTGCTTCTTTTCTTTCCTTGAGAACATTTCC CTGTTAAGAAATTGCCCAGTAAAATAAAGAATGCATAGTACCAGGGGGCGGGGGGTGGTGAGAAGTATAGTGAGGACATC ATCTCCCATTAGGCATATTAAGCTTAAAGTACAACTTTTATTCTGAAACAGTGTCGTGCCTCGTTTAATTATATGATTGA CATATACATGTTTGTGGTTTCCCTTGACCATTCACGTGTGCATGAACTGAATCATTCCAAGTATCAAGTATAAGTTTGCT ACTCAACATAAGTGCTGTATGCTGATAAAGTTTACTCATCTCCAATTAGAATATAAATTTGAACTCAATAGTTGACACCA TCATGGTTGGCATTTGTGTCACAGGTTGTGGTTAGATTTTTGAGTTTTTACAATCAAATAATGTGTATTTCACACCAAAC AATATTTTGATCAGGTTTTTCCCCTGTAACCTTTGGTATTTCACTGAGTGTTTATCCAGCACTCTGCCATTGTTGGCACC ATACGGACTGGCAGGGGAAGAATATGTTAGAGCTGCGTATCAGTAGTATTAGTAATTAATTAGTCTAAAAAGAAGCAATC AGTCTGATTCATTTGTAGGTGGGGACTTCATTTGTTTAAAGAGACTTGTATTTCTGATTTAAAGAAATGCTTTCCTTCCA CATTAAACACGTAGAAGATGGAAATCTTTTTGCACCAAAAAAAGATGAAAATCTTTAGGTGACATCCATTTACTGTTAGT AGCATGGGAAAGGATTTACAATGGCGGAGAGTGAAACGCCTTTATAGACTGATTTTTCTTAGTTACAATTTCGTTAATTT TGAAGTGCCATGCAGATTGTGAGGTATTGGATAATGCCAAAAGTTTACCTATTTCAAAATTTTCTCATGTCTTCTATGCA TCACAGGTTATTGGATTGAATCATGTTCCTATTGCTGGCGATGTATTTGAGGTTGTTGAGTCCCTTGATACTGCACGTGA AAGAGCAGATTCCCGTGCTGAGTCATTGCGAAATGAGCGTATTTCAGCAAAGGCAGGGGATGGCAAGGTCACCCTTTCTT CCTTAGCTTCTGCAGTTTCATCAGGAAAGCTTTCTGGATTAGATCTGCACCAGCTAAACATTATTTTGAAGGTTGATCTT CAGGTATAGTCACTGCTGCTCTTGTTATTGATTTGTTCCTACATCTTGTTGATTTTGAATATGGAACATTTACCTTGTTA TGCTTATTTCTTAAGTGATATCATGCTGTGATTTTACATTATATCCAATCATTGTAATAAGGTCGTGATTTATGTACCTC ACAACACTACCCTGGATATTTACCTGATGAATTTATCATATAACTTACAGCCACAAAAAAAAAGGTTCTGAGCACTTTTT CTTGCATGCAAAGATGTGCACGCCTATAGAGAGTAGACTAGTATAATATAGCTATTGATAATTAGCCAAAGATGTACTGA CCCTGCACTTTAACGCAATCAACTTACCAAGACATGGTTAGATATCTGTCTGCAAGGAAACATCTTAGTTTGTGAGACAT GCAGCATGCTTGGTTATGCTTGTCTAATTCTGAGTGTAGCCTATGTGAGAAGGCTTTCACTACCAAATATGATAAGCACA ATAACTGGTAAAAATTTATCCAATTCTTCATAGTTCTCGATAAATATGTAAATCTGTTGTATGCGGGACTGATGTTAACA ATAGGTAAACATACACTAAAGCTGGCATTTTCTGTTTTATACTAAATGACTACTACTTCAATATGTTTCCATGCACCATC ATCACATTGGTTATTGCTTCTTGTGGAATTAAAATATTATTTTTTATCCTGCTAGGGATCCATTGAAGCTGTCAAGCAAG CCCTGCAGGTGCTACCACAAGATAATGTCACGCTGAAGTTTTTATTGGAAACAACTGGGGATGTAAGCACAAGTGATGTT GACCTTGCGGTTGCAAGTAAAGCCATTATCTTTGGATTTAATGTCAAGGCACCAGGCCCTGTCAAAACCTATGCAGACAA CAAAGCTGTTGAAATTAGAATATATAGAGTTATTTATGAATTAATTGATGATGTACGAAATGCAATGGAAGGGCTCCTGG ACCTTGTTGAGGTAAATCACCATATATTTTAATTTGTAAACTTAGTTAGATTAGGCACATGCACACTGATTAATATGACA TTTACGTACATCGGAGCTTGTAAAGAAAATATGTCAAATGACATATAATTGTGTTCTACACTTTGTTTTAGAAAGCTTAC TTCTTGTAGACTTTATTGTATAGTTCCTGTTTTATTTTGTTTTAACACAATCATATCTTGCTGTTAGCATGCATCATGTA GTGTCACCTGTCGACCAGATTTCCCACCTGGTTATTCCTCATCATTTATGGTCCATGGACCTTTTTCATTTGAAGTTAAT GAATATTTTATTATTTACGAATTTAGAAGTTGCTGATGATTCAGCTGCAATACTTACTCGTTCCTATCTTTTCGTAGGAA CACATAACAATTGGTTCAGCAGAAGTGCGGGCCACATTCAGCAGTGGTAGTGGTCGTGTTGCTGGATGTATGATCACGGA CGGAAAGATACAAAGTGGCTGTGGTATTCGAGTCATTCGGAAGAAAAAAACGGTTCATGTTGGTACTCTTGTTTCCTTGA GACGGGTGAAGGAGATTGTTAAAGAGGTATAAACACTGCTTCCACTATTTCCCCCCCATCTTTACAATTTATATAAAAAA AAATCTTTGCAACAAAGGCATGCTGCAAGTATGAAAATGTTTAGGCAATGGTTTCTCCTCAATTTTAAGAATTTTTTTAA ATGTGAAGCCTGTTATTGTCAATTCATTTTGATTTGCATTTGGCTATTAGGAATGGGCAAATATGTTCTTTGTTTTTTTT CTCTTTTTCAAATTATCCTTTACCTGTTAAATATGCTATCATTTGAAGACAGTATTATCTTGTGATAAAGAATGATGATA ACTATGGATTTTCAGAAGAATTCTACATTTTCTGCTTTATTATCTACATCTGCATGGATTAATTTACTTTAGGTGCTCGA GTGTAAACCCAACGAAACTACCTCTCTTTGGATTTTTAAATTTTAATCACTTAATAAGCTTTGGTTGATATTATTAGATG CTCAAACTTGCAATTTTGACTGCCTGTTTAGCTTATTTACTTCCATGCATTTATTATGATTGCTGTTGTGGATTTGCAAT GTTGTTCCACTGTAAGAATCATCTTATTAGTTTTTGTCTTGTAGTTTGCATGTATCAAATGCATCATATAGATCCTTTGA CGCTTTATCATTACTCAATTTTGTAATCCAATTTGTCTGACTTGCTTTTTTTGGCTAATGTTGAATCTCACATTACCTTG CATGGTTTGTCCCCTGTCATATGCTCATGATACATCTGCTCTTTGGTAGTTTTTTGTTGTTCTCTGGTATGAAAATTAAA TAGTTGCTCCTCAAATGTGAAAAATATGAGGAGAAAAGCACGACTAAGCTTCGCTTGCTAGGGTTAGCTACAGGGATCAA TCAACACCATCAGGCATTGATCCAAAATCAAATTTTTTAACGAAACCATAACAATATAGGGCAAGGTCATTTTTTTGAAA AAAATAAATTTGAACAGTGTCTCCTAAATCCTAATCTGGATATTTATTGTATGGATTTCGTTTTCATTCAATTTTTAGTC AATGGACTATATCCACCTATTTGAAGGTCTAAAAGAAGGTTTTTATTACAAGTGAAATGTGCCACTTTCTTATTTATGGA TATCATGTTGTGTGTCGTACACGGACCATGAATCAGATTTGAACTTGATATATACTTGTTCCTTGAGATGTCTTCTATTA AATGATTTTGAGGAATAATTAGTGTTAGATGTTACCGTTTCTGAATTTGATTAACTTTTTGTTGCTGGTTTATAAGCAAA GTTGAGCAGTTGCTTGTGGTTTTTACCTATTGTTGTCTTTAATAGCTGTATGTTGGTTCTCCATAATATTATAGCCACTG CCTGGATTCACATTCCTTTTCTCTTCCTTGTGAACAGGTAAATGCTGGTCTTGAGTGCGGACTTGGGTTAGAGGACTTTG ATGATTGGGAAGAGGGAGATTTTGTTGAAGCCTTCAACACAGTTCAGAAGAAGAGGACCCTTGAAGAGGCCTCAGCATCA ATGGCAGCTGCTGTGGAGGGAGTAGGAGTTAAACTATAGAATGAACAATGAAGCGACACTACGAAAAGGGTTCCTATTTT GTGTTTGAGAGTGTCCGGAAAAGCATTCGGCGTTCGTGCTTAACAAAAAAAAACCCCGATTTCTCTCAAATTGATGTTGT GATATTGGGAAGAGGTAACATTGAAGGTGGCAGCTGAAGATCTAAAGTTCAAATTGATTTGTTCCTTTTGTTTGTTGTAG AGGTGTATATAACAACATACATTAGTTTCAGCTCCATGTAAAGAGGGTAAAAGTTTCAATGCCTTGACCCAGAAATGCTT GTAACACCCACGTATAAGACAAGGAAAGAAAAAGAATTGCAATTTTCCCTTTCATTTTTTGTATGATGCTCTGAAATGGA TGGCATCATCTTATTTTTTATAAAAGGAGAAGAAAAAAAATGGATGCATCATTTCAGAGGTCTGTGAAATTGTATCTCAA CTGTGTTTTGTTCCTAGATCATATATACTCAAATGGTCTATAGACTGCATCGTTGTAAATGTTTTGGCTGAAAATACTCG CTGTTAGTATTTGCTCCCAATTTAAAGAAATACTAGTATGTATACCCGTGCATCGGCACAGGGGACATATTTCCAAGTAT ATAATAGTTTGTTTTTAATATATAGAATTATTTATTTTGTATAAA
CDS sequence (LotjaGi3g1v0142900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTATATTGGTGGGGAACGTGCAAGGAACAATGAGTTCTCTTGCTTCCCCAGTGAGTTTGGGGAGTCTTACAGGGGT GAGTTCCTCTGGGAGGTCTCATTCTGTTGTGAGGAGAGTCTCTCTTTCTAGAGGGAACTGTAAGAAGAACAAGAAATGGC ATTGTGTGTCCTTTTCTATCTGTAGATATTCAGTCACCACAACTGATTTTATTGCTGACCAAGGCAATTCAGTGTCCCTT GATTCTAGTAGTGATAGTAAAGGTGGAGATAGTAGTGCTGGTTTTGTCCTTAAGCCTCCTCCTAAGCCTGTGTTGAAGTC CCCGGGCGATAAGGGGGACCCCATTTTAGGCTCAGGTTCTTGGGGGGGTTCAAGGAAAACTGAGGACTCGGATGATGTCG AAGAGAGGAATAAAGTGATTGAATCGCTTGGAGAGGTATTGGAGAAGGCTGAAAAGCTGGGAAGTCCTAAATTGGATGGG GAAAGAAATAACGGGTCGGTAAATAAACCGGCAAGACCTGATGTTAATGCTAATCCTAGGGCTGATAATAAGCCTGTAAA TTCAGTAAAAACCCAGAAGTCTAAAACCTTGAAGAGTGTATGGCGTAAAGGGGACACAGTTGCAACTGTGAAGAAGGTTG TGAAAGAAGTGCCGAGGCCTACTAGCAAGATTGAAGTGGGGAAATCTGAAATTGGGGGAGAGGAGAAGGTTACACCGCAG TCTCGTGCTCCTCAGCCTCCTTCAAAACCTCAACCAATGTTACAATCGAAGCCTTCTATAGCTCCCCCACCCATAAAAAA ACCTGTTGTGTTGAAGGATAAGGGGGAAGCTGAACCAACTGTTAAATCAAAAGAAAGGAAGCCCATCTTGATTGATAAGT TCGCATCCAAGAAACCAGCAGTTGATCCTTCAATTGCTCAAGCAGTTCTGGCCCCTCCAAAACCAGGGAAGGCTCCTCCC CCAGGAAAGTTTAAAGATGATTACCGGAGGAAAGGTGCTCCCACTGGGGGAGGACCAAGAAGACGACTAGTAGCTGATGA TATGATTGCTGATGAGGACACATCAGAACTCAATGTCTCTATTCCTGGTAAAACAAGAAAAGGAAGGAAATGGAGTAAAG CAAGCCGAAAGGCAGCAAGACTCCAGGCGGCCAAGGATGCAGCTCCTGTCAAAGTAGAAATTCTTGAGGTCGATGAAAAA GGTATGCTGGTGGAGGAGTTGGCCTACAATTTGGCAATCAGCGAAGGTGAAATCCTGGGTATTCTATACGCTAAGGGGAT TAAACCAGATGGGGTACAAACTCTAGACAAAGATATGGTGAGGATGATTTGTAATGAGTACGATGTTGAAGTTATAGATG CTGATCCTGTCAAAGTTGAAGGATTAATGAAGAAAAGAGACATTCTTGATGAAGGTGACCTTGACAAACTCAAAGATAGG CCTCCTGTCATTACTATTATGGGCCATGTAGATCATGGCAAGACAACACTTTTGGATTATATACGGAAGAGCAAGGTAGT TGCTTCAGAAGCTGGTGGGATCACACAGGGAATTGGGGCTTATAAAGTGCAAGTACCTATTGATGGTAAACCATTGCCTT GTGTTTTCCTTGACACTCCTGGGCATGAGGCATTTGGCGCAATGAGAGCCCGTGGAGCAAGTGTAACAGACATTGTCATT ATTGTTGTGGCTGCTGATGACGGTATTCGTCCACAGACAAATGAAGCTATAGCTCATGCCAAAGCAGCAGGAGTGCCCAT AATCATTGCTATAAATAAGATAGATAAAGATGGTGCAAATCCAGAACGAGTAATGCAAGAGCTTTCTTCGATTGGTTTAA TGCCAGAAGACTGGGGTGGTGACATCCCAATGGTTCAGATAAGTGCTCTTCAAGGGAAGAACGTAGATGATCTTTTAGAA ACTGTTATGCTTGTTGCTGAGTTGCAAGAACTGAAAGCTAATCCTGATAGAAGTGCAAAGGGCACAGTCATCGAGGCAGG GCTAGATAAATCAAAAGGACCATTTGCTACATTTATTGTACAGAATGGTTCCCTTAAAAGGGGAGATATAGTAGTTTGCG GAGAAGCATTCGGAAAGGTGCGGGCTCTATTTGATGATGGTGGAAAGCGTGTTGATGTAGCTACACCTTCTATACCTGTA CAGGTTATTGGATTGAATCATGTTCCTATTGCTGGCGATGTATTTGAGGTTGTTGAGTCCCTTGATACTGCACGTGAAAG AGCAGATTCCCGTGCTGAGTCATTGCGAAATGAGCGTATTTCAGCAAAGGCAGGGGATGGCAAGGTCACCCTTTCTTCCT TAGCTTCTGCAGTTTCATCAGGAAAGCTTTCTGGATTAGATCTGCACCAGCTAAACATTATTTTGAAGGTTGATCTTCAG GGATCCATTGAAGCTGTCAAGCAAGCCCTGCAGGTGCTACCACAAGATAATGTCACGCTGAAGTTTTTATTGGAAACAAC TGGGGATGTAAGCACAAGTGATGTTGACCTTGCGGTTGCAAGTAAAGCCATTATCTTTGGATTTAATGTCAAGGCACCAG GCCCTGTCAAAACCTATGCAGACAACAAAGCTGTTGAAATTAGAATATATAGAGTTATTTATGAATTAATTGATGATGTA CGAAATGCAATGGAAGGGCTCCTGGACCTTGTTGAGGAACACATAACAATTGGTTCAGCAGAAGTGCGGGCCACATTCAG CAGTGGTAGTGGTCGTGTTGCTGGATGTATGATCACGGACGGAAAGATACAAAGTGGCTGTGGTATTCGAGTCATTCGGA AGAAAAAAACGGTTCATGTTGGTACTCTTGTTTCCTTGAGACGGGTGAAGGAGATTGTTAAAGAGGTAAATGCTGGTCTT GAGTGCGGACTTGGGTTAGAGGACTTTGATGATTGGGAAGAGGGAGATTTTGTTGAAGCCTTCAACACAGTTCAGAAGAA GAGGACCCTTGAAGAGGCCTCAGCATCAATGGCAGCTGCTGTGGAGGGAGTAGGAGTTAAACTATAG
Protein sequence (LotjaGi3g1v0142900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLILVGNVQGTMSSLASPVSLGSLTGVSSSGRSHSVVRRVSLSRGNCKKNKKWHCVSFSICRYSVTTTDFIADQGNSVSL DSSSDSKGGDSSAGFVLKPPPKPVLKSPGDKGDPILGSGSWGGSRKTEDSDDVEERNKVIESLGEVLEKAEKLGSPKLDG ERNNGSVNKPARPDVNANPRADNKPVNSVKTQKSKTLKSVWRKGDTVATVKKVVKEVPRPTSKIEVGKSEIGGEEKVTPQ SRAPQPPSKPQPMLQSKPSIAPPPIKKPVVLKDKGEAEPTVKSKERKPILIDKFASKKPAVDPSIAQAVLAPPKPGKAPP PGKFKDDYRRKGAPTGGGPRRRLVADDMIADEDTSELNVSIPGKTRKGRKWSKASRKAARLQAAKDAAPVKVEILEVDEK GMLVEELAYNLAISEGEILGILYAKGIKPDGVQTLDKDMVRMICNEYDVEVIDADPVKVEGLMKKRDILDEGDLDKLKDR PPVITIMGHVDHGKTTLLDYIRKSKVVASEAGGITQGIGAYKVQVPIDGKPLPCVFLDTPGHEAFGAMRARGASVTDIVI IVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKIDKDGANPERVMQELSSIGLMPEDWGGDIPMVQISALQGKNVDDLLE TVMLVAELQELKANPDRSAKGTVIEAGLDKSKGPFATFIVQNGSLKRGDIVVCGEAFGKVRALFDDGGKRVDVATPSIPV QVIGLNHVPIAGDVFEVVESLDTARERADSRAESLRNERISAKAGDGKVTLSSLASAVSSGKLSGLDLHQLNIILKVDLQ GSIEAVKQALQVLPQDNVTLKFLLETTGDVSTSDVDLAVASKAIIFGFNVKAPGPVKTYADNKAVEIRIYRVIYELIDDV RNAMEGLLDLVEEHITIGSAEVRATFSSGSGRVAGCMITDGKIQSGCGIRVIRKKKTVHVGTLVSLRRVKEIVKEVNAGL ECGLGLEDFDDWEEGDFVEAFNTVQKKRTLEEASASMAAAVEGVGVKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Hamap | 7 | 988 | 982 | 15.57 | ||
| MobiDBLite | 78 | 136 | 59 | - | – | |
| MobiDBLite | 150 | 200 | 51 | - | – | |
| MobiDBLite | 181 | 195 | 15 | - | – | |
| PANTHER | 192 | 990 | 799 | 4.3E-282 | ||
| PANTHER | 192 | 990 | 799 | 4.3E-282 | – | |
| MobiDBLite | 214 | 232 | 19 | - | – | |
| MobiDBLite | 214 | 289 | 76 | - | – | |
| MobiDBLite | 243 | 265 | 23 | - | – | |
| MobiDBLite | 269 | 289 | 21 | - | – | |
| MobiDBLite | 305 | 341 | 37 | - | – | |
| MobiDBLite | 320 | 334 | 15 | - | – | |
| TIGRFAM | 401 | 990 | 590 | 4.7E-211 | ||
| SUPERFAMILY | 474 | 655 | 182 | 4.53E-49 | ||
| Gene3D | 476 | 654 | 179 | 8.3E-68 | – | |
| ProSiteProfiles | 479 | 652 | 174 | 48.245 | ||
| TIGRFAM | 481 | 642 | 162 | 2.8E-32 | ||
| CDD | 482 | 648 | 167 | 1.49887E-94 | – | |
| PRINTS | 483 | 496 | 14 | 3.1E-9 | ||
| Pfam | 484 | 644 | 161 | 1.0E-31 | ||
| PRINTS | 535 | 545 | 11 | 3.1E-9 | ||
| PRINTS | 551 | 562 | 12 | 3.1E-9 | ||
| PRINTS | 587 | 596 | 10 | 3.1E-9 | ||
| SUPERFAMILY | 655 | 739 | 85 | 1.1E-24 | ||
| Gene3D | 655 | 769 | 115 | 2.9E-36 | – | |
| CDD | 659 | 753 | 95 | 1.64057E-40 | – | |
| Coils | 738 | 758 | 21 | - | – | |
| SUPERFAMILY | 786 | 898 | 113 | 6.93E-27 | ||
| Gene3D | 787 | 891 | 105 | 2.4E-32 | ||
| Pfam | 789 | 880 | 92 | 4.4E-28 | ||
| Gene3D | 892 | 989 | 98 | 4.4E-26 | – | |
| SUPERFAMILY | 895 | 988 | 94 | 1.39E-24 | ||
| CDD | 898 | 980 | 83 | 2.14963E-32 | – | |
| ProSitePatterns | 941 | 963 | 23 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Translation initiation factor activity | Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide. | ||
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. | ||
| Biological process | Translational initiation | The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA. |
Expression pattern of LotjaGi3g1v0142900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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